Gene annotation
Transcriptome id Sobic.008G129000.2,Sobic.008G129000.1
Synonym AtIPCS1, Sb08g018140
Functional annotation phosphatidic acid phosphatase-related, putative, expressed
UniProt A0A1B6PDI9 , A0A1B6PDD8
Pfam PF14360
Panther DB PTHR21290 PTHR21290:SF33
NCBI CDD KOG3058; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G54020 : Arabidopsis Inositol phosphorylceramide synthase 1
RAP-DB (Rice) LOC_Os05g21180.1,LOC_Os05g21180.2 : phosphatidic acid phosphatase-related, putative, expressed
MaizeGDB (Corn) Zm00025a025479 , Zm00025a004132
Brachypodium KQK06896 , KQK05959
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G308700 ATG1, putative, expressed -
2 Sobic.001G284400 jmjC domain containing protein, expressed -
3 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
4 Sobic.004G278000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
5 Sobic.002G183400 heavy metal-associated domain containing protein, expressed -
6 Sobic.006G230400 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
7 Sobic.004G268200 expressed protein -
8 Sobic.004G228700 expressed protein -
9 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
10 Sobic.003G308400 expressed protein -
11 Sobic.001G409900 transporter, putative, expressed -
12 Sobic.006G263100 expressed protein -
13 Sobic.006G100700 expressed protein -
14 Sobic.005G044300 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
15 Sobic.001G499600 thioredoxin, putative, expressed -
16 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
17 Sobic.009G120800 OsCML15 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
18 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
19 Sobic.003G253500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
20 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -


Gene co-expression network
sample Sobic008G129000 Sobic008G129000 Sobic001G308700 Sobic001G308700 Sobic008G129000--Sobic001G308700 Sobic001G284400 Sobic001G284400 Sobic008G129000--Sobic001G284400 Sobic001G513300 Sobic001G513300 Sobic008G129000--Sobic001G513300 Sobic004G278000 Sobic004G278000 Sobic008G129000--Sobic004G278000 Sobic002G183400 Sobic002G183400 Sobic008G129000--Sobic002G183400 Sobic006G230400 Sobic006G230400 Sobic008G129000--Sobic006G230400 Sobic004G268200 Sobic004G268200 Sobic008G129000--Sobic004G268200 Sobic004G228700 Sobic004G228700 Sobic008G129000--Sobic004G228700 Sobic003G273000 Sobic003G273000 Sobic008G129000--Sobic003G273000 Sobic001G533300 Sobic001G533300 Sobic001G308700--Sobic001G533300 Sobic001G308700--Sobic001G513300 Sobic001G308700--Sobic008G129000 Sobic009G217000 Sobic009G217000 Sobic001G308700--Sobic009G217000 Sobic010G262300 Sobic010G262300 Sobic001G308700--Sobic010G262300 Sobic002G362000 Sobic002G362000 Sobic001G308700--Sobic002G362000 Sobic001G067601 Sobic001G067601 Sobic001G308700--Sobic001G067601 Sobic001G224400 Sobic001G224400 Sobic001G308700--Sobic001G224400 Sobic003G209000 Sobic003G209000 Sobic001G308700--Sobic003G209000 Sobic002G373600 Sobic002G373600 Sobic001G284400--Sobic002G373600 Sobic001G284425 Sobic001G284425 Sobic001G284400--Sobic001G284425 Sobic001G284400--Sobic008G129000 Sobic010G076700 Sobic010G076700 Sobic001G284400--Sobic010G076700 Sobic003G385000 Sobic003G385000 Sobic001G284400--Sobic003G385000 Sobic010G252900 Sobic010G252900 Sobic001G284400--Sobic010G252900 Sobic005G044300 Sobic005G044300 Sobic001G284400--Sobic005G044300 Sobic006G263100 Sobic006G263100 Sobic001G284400--Sobic006G263100 Sobic001G409900 Sobic001G409900 Sobic001G284400--Sobic001G409900 Sobic001G513300--Sobic003G273000 Sobic001G513300--Sobic004G228700 Sobic007G016100 Sobic007G016100 Sobic001G513300--Sobic007G016100 Sobic001G513300--Sobic001G308700 Sobic010G031000 Sobic010G031000 Sobic001G513300--Sobic010G031000 Sobic002G136700 Sobic002G136700 Sobic001G513300--Sobic002G136700 Sobic001G508466 Sobic001G508466 Sobic001G513300--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic001G513300--Sobic001G295100 Sobic001G513300--Sobic002G362000 Sobic004G278000--Sobic001G409900 Sobic004G278000--Sobic006G263100 Sobic002G118600 Sobic002G118600 Sobic004G278000--Sobic002G118600 Sobic004G278000--Sobic008G129000 Sobic004G259500 Sobic004G259500 Sobic004G278000--Sobic004G259500 Sobic009G171100 Sobic009G171100 Sobic004G278000--Sobic009G171100 Sobic004G280800 Sobic004G280800 Sobic004G278000--Sobic004G280800 Sobic003G425200 Sobic003G425200 Sobic004G278000--Sobic003G425200 Sobic003G392200 Sobic003G392200 Sobic004G278000--Sobic003G392200 Sobic002G183400--Sobic004G228700 Sobic002G183400--Sobic008G129000 Sobic001G437000 Sobic001G437000 Sobic002G183400--Sobic001G437000 Sobic001G282900 Sobic001G282900 Sobic002G183400--Sobic001G282900 Sobic002G183400--Sobic001G513300 Sobic010G028200 Sobic010G028200 Sobic002G183400--Sobic010G028200 Sobic002G183400--Sobic002G362000 Sobic002G183400--Sobic002G136700 Sobic004G123000 Sobic004G123000 Sobic002G183400--Sobic004G123000 Sobic003G380300 Sobic003G380300 Sobic006G230400--Sobic003G380300 Sobic006G188400 Sobic006G188400 Sobic006G230400--Sobic006G188400 Sobic001G408400 Sobic001G408400 Sobic006G230400--Sobic001G408400 Sobic003G335300 Sobic003G335300 Sobic006G230400--Sobic003G335300 Sobic001G482800 Sobic001G482800 Sobic006G230400--Sobic001G482800 Sobic007G138100 Sobic007G138100 Sobic006G230400--Sobic007G138100 Sobic006G230400--Sobic008G129000 Sobic001G365700 Sobic001G365700 Sobic006G230400--Sobic001G365700 Sobic006G230400--Sobic005G044300 Sobic007G171000 Sobic007G171000 Sobic004G268200--Sobic007G171000 Sobic004G268200--Sobic001G308700 Sobic004G268200--Sobic001G513300 Sobic004G268200--Sobic008G129000 Sobic002G202300 Sobic002G202300 Sobic004G268200--Sobic002G202300 Sobic002G386800 Sobic002G386800 Sobic004G268200--Sobic002G386800 Sobic010G246000 Sobic010G246000 Sobic004G268200--Sobic010G246000 Sobic005G028700 Sobic005G028700 Sobic004G268200--Sobic005G028700 Sobic004G339300 Sobic004G339300 Sobic004G268200--Sobic004G339300 Sobic004G228700--Sobic001G513300 Sobic004G228700--Sobic002G136700 Sobic001G110000 Sobic001G110000 Sobic004G228700--Sobic001G110000 Sobic004G259600 Sobic004G259600 Sobic004G228700--Sobic004G259600 Sobic004G228700--Sobic003G273000 Sobic004G259432 Sobic004G259432 Sobic004G228700--Sobic004G259432 Sobic001G197000 Sobic001G197000 Sobic004G228700--Sobic001G197000 Sobic004G228700--Sobic002G183400 Sobic004G159400 Sobic004G159400 Sobic004G228700--Sobic004G159400 Sobic003G273000--Sobic001G513300 Sobic004G232500 Sobic004G232500 Sobic003G273000--Sobic004G232500 Sobic009G069600 Sobic009G069600 Sobic003G273000--Sobic009G069600 Sobic003G273000--Sobic010G031000 Sobic003G273000--Sobic004G159400 Sobic006G118400 Sobic006G118400 Sobic003G273000--Sobic006G118400 Sobic003G273000--Sobic001G508466 Sobic003G273000--Sobic001G295100 Sobic010G216400 Sobic010G216400 Sobic003G273000--Sobic010G216400
Octagon: transcription factors


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