Gene annotation
Transcriptome id Sobic.004G228700.1
Synonym Sb04g027310
Functional annotation expressed protein
UniProt C5XYA8
Pfam -
Panther DB PTHR34046 PTHR34046:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g52170.1 : expressed protein
MaizeGDB (Corn) Zm00025a022167 , Zm00025a033127
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
2 Sobic.002G136700 expressed protein -
3 Sobic.001G110000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
4 Sobic.004G259600 slowmo homolog, putative, expressed -
5 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
6 Sobic.004G259432 - -
7 Sobic.001G197000 dehydration response related protein, putative, expressed -
8 Sobic.002G183400 heavy metal-associated domain containing protein, expressed -
9 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
10 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
11 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
12 Sobic.010G031000 expressed protein -
13 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
14 Sobic.004G341800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin family protein, putative, expressed -
15 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
16 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
17 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
18 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
19 Sobic.001G331200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
20 Sobic.002G104900 B12D protein, putative, expressed -


Gene co-expression network
sample Sobic004G228700 Sobic004G228700 Sobic001G513300 Sobic001G513300 Sobic004G228700--Sobic001G513300 Sobic002G136700 Sobic002G136700 Sobic004G228700--Sobic002G136700 Sobic001G110000 Sobic001G110000 Sobic004G228700--Sobic001G110000 Sobic004G259600 Sobic004G259600 Sobic004G228700--Sobic004G259600 Sobic003G273000 Sobic003G273000 Sobic004G228700--Sobic003G273000 Sobic004G259432 Sobic004G259432 Sobic004G228700--Sobic004G259432 Sobic001G197000 Sobic001G197000 Sobic004G228700--Sobic001G197000 Sobic002G183400 Sobic002G183400 Sobic004G228700--Sobic002G183400 Sobic004G159400 Sobic004G159400 Sobic004G228700--Sobic004G159400 Sobic001G513300--Sobic003G273000 Sobic001G513300--Sobic004G228700 Sobic007G016100 Sobic007G016100 Sobic001G513300--Sobic007G016100 Sobic001G308700 Sobic001G308700 Sobic001G513300--Sobic001G308700 Sobic010G031000 Sobic010G031000 Sobic001G513300--Sobic010G031000 Sobic001G513300--Sobic002G136700 Sobic001G508466 Sobic001G508466 Sobic001G513300--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic001G513300--Sobic001G295100 Sobic002G362000 Sobic002G362000 Sobic001G513300--Sobic002G362000 Sobic002G136700--Sobic004G228700 Sobic003G215700 Sobic003G215700 Sobic002G136700--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic002G136700--Sobic002G418400 Sobic010G028200 Sobic010G028200 Sobic002G136700--Sobic010G028200 Sobic003G209000 Sobic003G209000 Sobic002G136700--Sobic003G209000 Sobic003G218400 Sobic003G218400 Sobic002G136700--Sobic003G218400 Sobic001G047800 Sobic001G047800 Sobic002G136700--Sobic001G047800 Sobic001G533500 Sobic001G533500 Sobic002G136700--Sobic001G533500 Sobic002G135200 Sobic002G135200 Sobic002G136700--Sobic002G135200 Sobic002G329900 Sobic002G329900 Sobic001G110000--Sobic002G329900 Sobic004G055100 Sobic004G055100 Sobic001G110000--Sobic004G055100 Sobic001G404800 Sobic001G404800 Sobic001G110000--Sobic001G404800 Sobic002G246200 Sobic002G246200 Sobic001G110000--Sobic002G246200 Sobic003G160700 Sobic003G160700 Sobic001G110000--Sobic003G160700 Sobic001G110000--Sobic003G215700 Sobic001G110000--Sobic003G209000 Sobic001G110000--Sobic002G418400 Sobic001G110000--Sobic001G047800 Sobic004G247200 Sobic004G247200 Sobic004G259600--Sobic004G247200 Sobic002G348100 Sobic002G348100 Sobic004G259600--Sobic002G348100 Sobic003G063200 Sobic003G063200 Sobic004G259600--Sobic003G063200 Sobic005G168100 Sobic005G168100 Sobic004G259600--Sobic005G168100 Sobic001G055600 Sobic001G055600 Sobic004G259600--Sobic001G055600 Sobic009G232900 Sobic009G232900 Sobic004G259600--Sobic009G232900 Sobic002G372400 Sobic002G372400 Sobic004G259600--Sobic002G372400 Sobic010G204600 Sobic010G204600 Sobic004G259600--Sobic010G204600 Sobic005G028700 Sobic005G028700 Sobic004G259600--Sobic005G028700 Sobic003G273000--Sobic001G513300 Sobic004G232500 Sobic004G232500 Sobic003G273000--Sobic004G232500 Sobic009G069600 Sobic009G069600 Sobic003G273000--Sobic009G069600 Sobic003G273000--Sobic010G031000 Sobic003G273000--Sobic004G159400 Sobic006G118400 Sobic006G118400 Sobic003G273000--Sobic006G118400 Sobic003G273000--Sobic001G508466 Sobic003G273000--Sobic001G295100 Sobic010G216400 Sobic010G216400 Sobic003G273000--Sobic010G216400 Sobic004G259432--Sobic002G418400 Sobic007G151100 Sobic007G151100 Sobic004G259432--Sobic007G151100 Sobic004G259432--Sobic004G159400 Sobic004G340900 Sobic004G340900 Sobic004G259432--Sobic004G340900 Sobic005G018700 Sobic005G018700 Sobic004G259432--Sobic005G018700 Sobic009G188000 Sobic009G188000 Sobic004G259432--Sobic009G188000 Sobic003G037800 Sobic003G037800 Sobic004G259432--Sobic003G037800 Sobic002G245100 Sobic002G245100 Sobic004G259432--Sobic002G245100 Sobic004G259432--Sobic005G168100 Sobic001G197000--Sobic004G159400 Sobic001G077000 Sobic001G077000 Sobic001G197000--Sobic001G077000 Sobic001G197000--Sobic002G329900 Sobic001G197000--Sobic003G215700 Sobic001G197000--Sobic001G047800 Sobic001G533400 Sobic001G533400 Sobic001G197000--Sobic001G533400 Sobic001G197000--Sobic003G209000 Sobic001G197000--Sobic002G418400 Sobic001G197000--Sobic010G031000 Sobic002G183400--Sobic004G228700 Sobic008G129000 Sobic008G129000 Sobic002G183400--Sobic008G129000 Sobic001G437000 Sobic001G437000 Sobic002G183400--Sobic001G437000 Sobic001G282900 Sobic001G282900 Sobic002G183400--Sobic001G282900 Sobic002G183400--Sobic001G513300 Sobic002G183400--Sobic010G028200 Sobic002G183400--Sobic002G362000 Sobic002G183400--Sobic002G136700 Sobic004G123000 Sobic004G123000 Sobic002G183400--Sobic004G123000 Sobic004G159400--Sobic001G197000 Sobic004G159400--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic004G159400--Sobic008G006300 Sobic004G159400--Sobic001G047800 Sobic004G159400--Sobic003G273000 Sobic004G159400--Sobic002G418400 Sobic004G159400--Sobic002G329900 Sobic004G159400--Sobic004G259432 Sobic004G159400--Sobic004G232500
Octagon: transcription factors


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