Gene annotation
Transcriptome id Sobic.007G158800.1,Sobic.007G158800.2
Synonym PLP2, Sb07g023230, PLA2A, PLAIIA
Functional annotation patatin, putative, expressed
UniProt A0A1Z5RA39 , A0A1Z5RB28
Pfam PF01734
Panther DB PTHR32176 PTHR32176:SF7
NCBI CDD KOG0513; Ca2+-independent phospholipase A2
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT2G26560 : phospholipase A 2A
RAP-DB (Rice) LOC_Os08g37210.1,LOC_Os08g37250.1 : patatin, putative, expressed
MaizeGDB (Corn) Zm00025a005449 , Zm00025a005450
Brachypodium KQJ98662
Barley HORVU2Hr1G029000.1 , HORVU2Hr1G029000.3 , HORVU2Hr1G029000.2 , HORVU2Hr1G029000.5 , HORVU2Hr1G029000.4 , HORVU2Hr1G037280.4 , HORVU5Hr1G119810.2 , HORVU2Hr1G037280.1 , HORVU2Hr1G037280.2 , HORVU2Hr1G037280.3 , HORVU5Hr1G119820.4 , HORVU5Hr1G119820.1 , HORVU5Hr1G119820.2 , HORVU5Hr1G119820.3 , HORVU5Hr1G119810.1 , HORVU5Hr1G119810.3 , HORVU5Hr1G119810.5 , HORVU5Hr1G119810.4 , HORVU5Hr1G119810.6
Wheat TraesCS2A02G159600 , TraesCS5D02G528100 , TraesCS5D02G528100 , TraesCS1A02G407800 , TraesCS1A02G407800 , TraesCS1A02G407800 , TraesCS2B02G185200 , TraesCS5B02G529100 , TraesCS5B02G529100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G502000 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
2 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
3 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
4 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
5 Sobic.005G222500 phospholipase D, putative, expressed K01115: phospholipase D1/2
6 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
7 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
8 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
9 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
10 Sobic.004G322100 hypro1, putative, expressed -
11 Sobic.010G152400 glycosyltransferase, putative, expressed -
12 Sobic.001G261509 - K09872: aquaporin PIP
13 Sobic.008G019800 - -
14 Sobic.003G400900 keratin, type I cytoskeletal 9, putative, expressed -
15 Sobic.003G140700 peroxidase precursor, putative, expressed -
16 Sobic.001G438200 expressed protein -
17 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.004G119600 expansin precursor, putative, expressed -
19 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
20 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic007G158800 Sobic007G158800 Sobic001G502000 Sobic001G502000 Sobic007G158800--Sobic001G502000 Sobic001G229000 Sobic001G229000 Sobic007G158800--Sobic001G229000 Sobic002G183700 Sobic002G183700 Sobic007G158800--Sobic002G183700 Sobic006G089000 Sobic006G089000 Sobic007G158800--Sobic006G089000 Sobic005G222500 Sobic005G222500 Sobic007G158800--Sobic005G222500 Sobic004G029100 Sobic004G029100 Sobic007G158800--Sobic004G029100 Sobic003G000100 Sobic003G000100 Sobic007G158800--Sobic003G000100 Sobic006G003100 Sobic006G003100 Sobic007G158800--Sobic006G003100 Sobic007G086300 Sobic007G086300 Sobic007G158800--Sobic007G086300 Sobic001G502000--Sobic007G158800 Sobic001G502000--Sobic005G222500 Sobic001G502000--Sobic006G089000 Sobic001G502000--Sobic002G183700 Sobic001G502000--Sobic001G229000 Sobic001G261509 Sobic001G261509 Sobic001G502000--Sobic001G261509 Sobic001G502000--Sobic004G029100 Sobic003G400900 Sobic003G400900 Sobic001G502000--Sobic003G400900 Sobic008G019800 Sobic008G019800 Sobic001G502000--Sobic008G019800 Sobic001G229000--Sobic007G158800 Sobic006G028500 Sobic006G028500 Sobic001G229000--Sobic006G028500 Sobic004G322100 Sobic004G322100 Sobic001G229000--Sobic004G322100 Sobic001G229000--Sobic001G502000 Sobic001G229000--Sobic007G086300 Sobic004G110700 Sobic004G110700 Sobic001G229000--Sobic004G110700 Sobic010G152400 Sobic010G152400 Sobic001G229000--Sobic010G152400 Sobic004G306900 Sobic004G306900 Sobic001G229000--Sobic004G306900 Sobic001G229000--Sobic008G019800 Sobic002G183700--Sobic007G158800 Sobic002G183700--Sobic004G029100 Sobic002G183700--Sobic001G502000 Sobic003G140700 Sobic003G140700 Sobic002G183700--Sobic003G140700 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic006G225500 Sobic006G225500 Sobic002G183700--Sobic006G225500 Sobic002G183700--Sobic004G322100 Sobic003G311800 Sobic003G311800 Sobic002G183700--Sobic003G311800 Sobic006G089000--Sobic007G158800 Sobic006G089000--Sobic001G502000 Sobic006G089000--Sobic002G183700 Sobic001G379400 Sobic001G379400 Sobic006G089000--Sobic001G379400 Sobic006G089000--Sobic001G261509 Sobic004G297900 Sobic004G297900 Sobic006G089000--Sobic004G297900 Sobic006G089000--Sobic001G229000 Sobic006G089000--Sobic004G322100 Sobic001G238300 Sobic001G238300 Sobic006G089000--Sobic001G238300 Sobic005G222500--Sobic001G502000 Sobic005G222500--Sobic007G158800 Sobic005G222500--Sobic001G261509 Sobic004G299600 Sobic004G299600 Sobic005G222500--Sobic004G299600 Sobic005G222500--Sobic003G400900 Sobic001G242100 Sobic001G242100 Sobic005G222500--Sobic001G242100 Sobic002G301900 Sobic002G301900 Sobic005G222500--Sobic002G301900 Sobic009G065800 Sobic009G065800 Sobic005G222500--Sobic009G065800 Sobic007G158600 Sobic007G158600 Sobic005G222500--Sobic007G158600 Sobic004G029100--Sobic004G322100 Sobic004G029100--Sobic002G183700 Sobic004G029100--Sobic010G152400 Sobic004G029100--Sobic007G158800 Sobic004G029100--Sobic003G000100 Sobic007G008600 Sobic007G008600 Sobic004G029100--Sobic007G008600 Sobic004G029100--Sobic001G502000 Sobic003G182200 Sobic003G182200 Sobic004G029100--Sobic003G182200 Sobic004G029100--Sobic008G019800 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic003G000100--Sobic006G003100 Sobic003G000100--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic003G000100--Sobic006G092700 Sobic004G106100 Sobic004G106100 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G240400 Sobic003G240400 Sobic003G000100--Sobic003G240400 Sobic003G000100--Sobic007G086300 Sobic006G003100--Sobic003G000100 Sobic006G003100--Sobic010G152400 Sobic010G031700 Sobic010G031700 Sobic006G003100--Sobic010G031700 Sobic006G003100--Sobic004G106100 Sobic006G003100--Sobic007G086300 Sobic002G233200 Sobic002G233200 Sobic006G003100--Sobic002G233200 Sobic006G003100--Sobic004G322100 Sobic006G003100--Sobic004G306900 Sobic006G003100--Sobic007G158800 Sobic007G086300--Sobic004G106100 Sobic007G086300--Sobic004G306900 Sobic003G064800 Sobic003G064800 Sobic007G086300--Sobic003G064800 Sobic006G205700 Sobic006G205700 Sobic007G086300--Sobic006G205700 Sobic007G086300--Sobic003G000100 Sobic002G392100 Sobic002G392100 Sobic007G086300--Sobic002G392100 Sobic001G319300 Sobic001G319300 Sobic007G086300--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic007G086300--Sobic008G034900 Sobic003G319400 Sobic003G319400 Sobic007G086300--Sobic003G319400
Octagon: transcription factors


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