Gene annotation
Transcriptome id Sobic.006G028500.1
Synonym Sb06g002930
Functional annotation 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed
UniProt C5YCV6
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF123
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G06620 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os04g10350.1 : 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed
MaizeGDB (Corn) Zm00025a055609
Brachypodium -
Barley -
Wheat TraesCS3B02G508500 , TraesCS3B02G508500 , TraesCS2D02G028000 , TraesCS2A02G026500 , TraesCS2A02G025900 , TraesCS2A02G025800 , TraesCS2D02G028700 , TraesCS2D02G028700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G306900 amino acid transporter, putative, expressed -
2 Sobic.006G019700 transferase family protein, putative, expressed -
3 Sobic.004G110700 DNA binding protein, putative, expressed -
4 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
5 Sobic.003G240400 leaf senescence related protein, putative, expressed -
6 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
7 Sobic.004G322100 hypro1, putative, expressed -
8 Sobic.010G152400 glycosyltransferase, putative, expressed -
9 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
10 Sobic.003G140700 peroxidase precursor, putative, expressed -
11 Sobic.003G064800 dirigent, putative, expressed -
12 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
14 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
15 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
16 Sobic.010G234500 O-methyltransferase, putative, expressed -
17 Sobic.004G271800 WRKY66, expressed -
18 Sobic.009G219200 expressed protein -
19 Sobic.002G404100 annexin, putative, expressed -
20 Sobic.004G323300 SCP-like extracellular protein, expressed -


Gene co-expression network
sample Sobic006G028500 Sobic006G028500 Sobic004G306900 Sobic004G306900 Sobic006G028500--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G028500--Sobic006G019700 Sobic004G110700 Sobic004G110700 Sobic006G028500--Sobic004G110700 Sobic001G229000 Sobic001G229000 Sobic006G028500--Sobic001G229000 Sobic003G240400 Sobic003G240400 Sobic006G028500--Sobic003G240400 Sobic010G082000 Sobic010G082000 Sobic006G028500--Sobic010G082000 Sobic004G322100 Sobic004G322100 Sobic006G028500--Sobic004G322100 Sobic010G152400 Sobic010G152400 Sobic006G028500--Sobic010G152400 Sobic003G000100 Sobic003G000100 Sobic006G028500--Sobic003G000100 Sobic004G306900--Sobic006G028500 Sobic003G064800 Sobic003G064800 Sobic004G306900--Sobic003G064800 Sobic007G086300 Sobic007G086300 Sobic004G306900--Sobic007G086300 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic004G306900--Sobic006G019700 Sobic003G319400 Sobic003G319400 Sobic004G306900--Sobic003G319400 Sobic004G306900--Sobic010G152400 Sobic004G306900--Sobic004G322100 Sobic006G019700--Sobic004G306900 Sobic003G182200 Sobic003G182200 Sobic006G019700--Sobic003G182200 Sobic006G019700--Sobic006G028500 Sobic006G019700--Sobic004G322100 Sobic006G019700--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic006G019700--Sobic006G092700 Sobic006G019700--Sobic010G152400 Sobic006G135300 Sobic006G135300 Sobic006G019700--Sobic006G135300 Sobic006G019700--Sobic003G000100 Sobic004G110700--Sobic006G028500 Sobic003G269600 Sobic003G269600 Sobic004G110700--Sobic003G269600 Sobic006G150100 Sobic006G150100 Sobic004G110700--Sobic006G150100 Sobic003G140700 Sobic003G140700 Sobic004G110700--Sobic003G140700 Sobic002G003700 Sobic002G003700 Sobic004G110700--Sobic002G003700 Sobic004G110700--Sobic004G322100 Sobic005G127400 Sobic005G127400 Sobic004G110700--Sobic005G127400 Sobic004G110700--Sobic001G229000 Sobic004G110700--Sobic006G019700 Sobic007G158800 Sobic007G158800 Sobic001G229000--Sobic007G158800 Sobic001G229000--Sobic006G028500 Sobic001G229000--Sobic004G322100 Sobic001G502000 Sobic001G502000 Sobic001G229000--Sobic001G502000 Sobic001G229000--Sobic007G086300 Sobic001G229000--Sobic004G110700 Sobic001G229000--Sobic010G152400 Sobic001G229000--Sobic004G306900 Sobic008G019800 Sobic008G019800 Sobic001G229000--Sobic008G019800 Sobic003G240400--Sobic010G082000 Sobic003G215300 Sobic003G215300 Sobic003G240400--Sobic003G215300 Sobic001G263300 Sobic001G263300 Sobic003G240400--Sobic001G263300 Sobic006G196400 Sobic006G196400 Sobic003G240400--Sobic006G196400 Sobic007G090600 Sobic007G090600 Sobic003G240400--Sobic007G090600 Sobic003G240400--Sobic010G152400 Sobic003G240400--Sobic006G028500 Sobic003G240400--Sobic003G000100 Sobic008G035800 Sobic008G035800 Sobic003G240400--Sobic008G035800 Sobic010G082000--Sobic006G092700 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic007G073000 Sobic007G073000 Sobic010G082000--Sobic007G073000 Sobic010G082000--Sobic006G196400 Sobic004G322100--Sobic003G000100 Sobic004G322100--Sobic010G152400 Sobic004G322100--Sobic003G140700 Sobic004G323300 Sobic004G323300 Sobic004G322100--Sobic004G323300 Sobic004G322100--Sobic004G306900 Sobic004G322100--Sobic006G019700 Sobic004G029100 Sobic004G029100 Sobic004G322100--Sobic004G029100 Sobic004G322100--Sobic006G028500 Sobic004G322100--Sobic004G110700 Sobic010G152400--Sobic003G000100 Sobic010G152400--Sobic004G322100 Sobic010G152400--Sobic003G240400 Sobic010G152400--Sobic004G306900 Sobic010G152400--Sobic006G092700 Sobic010G152400--Sobic010G082000 Sobic006G003100 Sobic006G003100 Sobic010G152400--Sobic006G003100 Sobic010G152400--Sobic004G106100 Sobic010G152400--Sobic006G019700 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic003G000100--Sobic006G003100 Sobic003G000100--Sobic004G306900 Sobic003G000100--Sobic006G092700 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G000100--Sobic003G240400 Sobic003G000100--Sobic007G086300
Octagon: transcription factors


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