Gene annotation
Transcriptome id Sobic.007G086300.1
Synonym XTH22, Sb07g007450, TCH4
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5YJE6
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G57560 : Xyloglucan endotransglucosylase/hydrolase family protein
RAP-DB (Rice) LOC_Os08g14200.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a030917
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.004G306900 amino acid transporter, putative, expressed -
3 Sobic.003G064800 dirigent, putative, expressed -
4 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
5 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
6 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.008G034900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
9 Sobic.003G319400 receptor protein kinase, putative, expressed -
10 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.010G152400 glycosyltransferase, putative, expressed -
12 Sobic.001G414800 dirigent, putative, expressed -
13 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
14 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
15 Sobic.005G217766 - -
16 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.005G097400 cell death associated protein, putative, expressed -
18 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.001G438200 expressed protein -


Gene co-expression network
sample Sobic007G086300 Sobic007G086300 Sobic004G106100 Sobic004G106100 Sobic007G086300--Sobic004G106100 Sobic004G306900 Sobic004G306900 Sobic007G086300--Sobic004G306900 Sobic003G064800 Sobic003G064800 Sobic007G086300--Sobic003G064800 Sobic006G205700 Sobic006G205700 Sobic007G086300--Sobic006G205700 Sobic003G000100 Sobic003G000100 Sobic007G086300--Sobic003G000100 Sobic002G392100 Sobic002G392100 Sobic007G086300--Sobic002G392100 Sobic001G319300 Sobic001G319300 Sobic007G086300--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic007G086300--Sobic008G034900 Sobic003G319400 Sobic003G319400 Sobic007G086300--Sobic003G319400 Sobic004G106100--Sobic007G086300 Sobic004G106100--Sobic006G205700 Sobic004G106100--Sobic004G306900 Sobic004G106100--Sobic003G000100 Sobic010G031700 Sobic010G031700 Sobic004G106100--Sobic010G031700 Sobic003G282300 Sobic003G282300 Sobic004G106100--Sobic003G282300 Sobic002G391400 Sobic002G391400 Sobic004G106100--Sobic002G391400 Sobic002G233200 Sobic002G233200 Sobic004G106100--Sobic002G233200 Sobic010G152400 Sobic010G152400 Sobic004G106100--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic004G306900--Sobic003G000100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic004G306900--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G306900--Sobic004G322100 Sobic005G127400 Sobic005G127400 Sobic003G064800--Sobic005G127400 Sobic002G255000 Sobic002G255000 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic001G238200 Sobic001G238200 Sobic003G064800--Sobic001G238200 Sobic003G140700 Sobic003G140700 Sobic003G064800--Sobic003G140700 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500 Sobic006G205700--Sobic002G391400 Sobic003G441800 Sobic003G441800 Sobic006G205700--Sobic003G441800 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic006G205700--Sobic010G241900 Sobic005G046400 Sobic005G046400 Sobic006G205700--Sobic005G046400 Sobic007G206800 Sobic007G206800 Sobic006G205700--Sobic007G206800 Sobic003G441601 Sobic003G441601 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic006G003100 Sobic006G003100 Sobic003G000100--Sobic006G003100 Sobic003G000100--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic003G000100--Sobic006G092700 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G240400 Sobic003G240400 Sobic003G000100--Sobic003G240400 Sobic003G000100--Sobic007G086300 Sobic002G392100--Sobic002G391400 Sobic002G392100--Sobic007G206800 Sobic002G334000 Sobic002G334000 Sobic002G392100--Sobic002G334000 Sobic002G392100--Sobic007G086300 Sobic002G392100--Sobic006G205700 Sobic002G392100--Sobic008G034900 Sobic002G392100--Sobic003G167300 Sobic002G392100--Sobic010G241900 Sobic001G499900 Sobic001G499900 Sobic002G392100--Sobic001G499900 Sobic009G186500 Sobic009G186500 Sobic001G319300--Sobic009G186500 Sobic001G319300--Sobic007G086300 Sobic001G319300--Sobic002G255000 Sobic001G319300--Sobic008G034900 Sobic004G110200 Sobic004G110200 Sobic001G319300--Sobic004G110200 Sobic001G319300--Sobic003G064800 Sobic001G319300--Sobic002G392100 Sobic003G400900 Sobic003G400900 Sobic001G319300--Sobic003G400900 Sobic001G182200 Sobic001G182200 Sobic001G319300--Sobic001G182200 Sobic008G034900--Sobic007G086300 Sobic008G034900--Sobic002G392100 Sobic009G065800 Sobic009G065800 Sobic008G034900--Sobic009G065800 Sobic008G034900--Sobic001G319300 Sobic008G020000 Sobic008G020000 Sobic008G034900--Sobic008G020000 Sobic008G022100 Sobic008G022100 Sobic008G034900--Sobic008G022100 Sobic008G034900--Sobic003G064800 Sobic008G034900--Sobic003G167300 Sobic002G068000 Sobic002G068000 Sobic008G034900--Sobic002G068000 Sobic003G319400--Sobic006G106900 Sobic005G202300 Sobic005G202300 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic003G319400--Sobic007G086300 Sobic003G282200 Sobic003G282200 Sobic003G319400--Sobic003G282200 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000
Octagon: transcription factors


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