Gene annotation
Transcriptome id Sobic.001G438200.1
Synonym Sb01g041200
Functional annotation expressed protein
UniProt C5WQZ3
Pfam -
Panther DB PTHR36481 PTHR36481:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g14150.1 : expressed protein
MaizeGDB (Corn) Zm00025a052894
Brachypodium KQK22616 , KQK22617
Barley HORVU4Hr1G063470.1 , HORVU5Hr1G084430.2 , HORVU5Hr1G084430.1 , HORVU4Hr1G063430.1 , HORVU4Hr1G063480.1
Wheat TraesCS5B02G333900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G064800 dirigent, putative, expressed -
2 Sobic.002G255000 AIR12, putative, expressed -
3 Sobic.003G140700 peroxidase precursor, putative, expressed -
4 Sobic.003G319400 receptor protein kinase, putative, expressed -
5 Sobic.009G219200 expressed protein -
6 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.004G306900 amino acid transporter, putative, expressed -
8 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.004G322100 hypro1, putative, expressed -
10 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
11 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G238200 expansin precursor, putative, expressed -
13 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
14 Sobic.003G282200 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.010G152400 glycosyltransferase, putative, expressed -
16 Sobic.008G019800 - -
17 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
18 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
19 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
20 Sobic.004G209400 carbonyl reductase 3, putative, expressed -


Gene co-expression network
sample Sobic001G438200 Sobic001G438200 Sobic003G064800 Sobic003G064800 Sobic001G438200--Sobic003G064800 Sobic002G255000 Sobic002G255000 Sobic001G438200--Sobic002G255000 Sobic003G140700 Sobic003G140700 Sobic001G438200--Sobic003G140700 Sobic003G319400 Sobic003G319400 Sobic001G438200--Sobic003G319400 Sobic009G219200 Sobic009G219200 Sobic001G438200--Sobic009G219200 Sobic006G106900 Sobic006G106900 Sobic001G438200--Sobic006G106900 Sobic004G306900 Sobic004G306900 Sobic001G438200--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic001G438200--Sobic006G273300 Sobic004G322100 Sobic004G322100 Sobic001G438200--Sobic004G322100 Sobic005G127400 Sobic005G127400 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic003G064800--Sobic006G106900 Sobic001G238200 Sobic001G238200 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500 Sobic002G255000--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic002G255000--Sobic007G008600 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic009G186500 Sobic009G186500 Sobic002G255000--Sobic009G186500 Sobic006G225500 Sobic006G225500 Sobic002G255000--Sobic006G225500 Sobic002G255000--Sobic001G238200 Sobic007G100700 Sobic007G100700 Sobic002G255000--Sobic007G100700 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic003G319400--Sobic006G106900 Sobic005G202300 Sobic005G202300 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic003G319400--Sobic007G086300 Sobic003G282200 Sobic003G282200 Sobic003G319400--Sobic003G282200 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic009G219200--Sobic003G140700 Sobic009G219200--Sobic001G438200 Sobic001G237800 Sobic001G237800 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic009G219200--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic009G219200--Sobic006G079300 Sobic001G238000 Sobic001G238000 Sobic009G219200--Sobic001G238000 Sobic009G219200--Sobic001G238200 Sobic006G106900--Sobic003G319400 Sobic006G106900--Sobic005G202300 Sobic006G106900--Sobic003G064800 Sobic001G414800 Sobic001G414800 Sobic006G106900--Sobic001G414800 Sobic006G106900--Sobic004G306900 Sobic001G507100 Sobic001G507100 Sobic006G106900--Sobic001G507100 Sobic006G106900--Sobic009G181600 Sobic006G106900--Sobic001G438200 Sobic006G106900--Sobic003G280000 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic004G306900--Sobic010G152400 Sobic004G306900--Sobic004G322100 Sobic006G273300--Sobic002G255000 Sobic006G273300--Sobic001G438200 Sobic006G273300--Sobic007G008600 Sobic006G273300--Sobic003G140700 Sobic006G273300--Sobic003G064800 Sobic006G273300--Sobic006G225500 Sobic006G273300--Sobic005G127400 Sobic004G029100 Sobic004G029100 Sobic006G273300--Sobic004G029100 Sobic002G183700 Sobic002G183700 Sobic006G273300--Sobic002G183700 Sobic004G322100--Sobic003G000100 Sobic004G322100--Sobic010G152400 Sobic004G322100--Sobic003G140700 Sobic004G323300 Sobic004G323300 Sobic004G322100--Sobic004G323300 Sobic004G322100--Sobic004G306900 Sobic004G322100--Sobic006G019700 Sobic004G322100--Sobic004G029100 Sobic004G322100--Sobic006G028500 Sobic004G322100--Sobic004G110700
Octagon: transcription factors


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