Gene annotation
Transcriptome id Sobic.003G205300.1
Synonym Sb03g026700
Functional annotation DUF581 domain containing protein, expressed
UniProt C5XPK6
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22550 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os01g41010.2 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028587
Brachypodium KQK08550 , PNT72310 , KQK08551
Barley HORVU3Hr1G051540.1 , HORVU3Hr1G051540.8 , HORVU3Hr1G051540.9 , HORVU3Hr1G051540.2 , HORVU3Hr1G051540.3 , HORVU3Hr1G051540.4 , HORVU3Hr1G051540.5
Wheat TraesCS3D02G215200
Populus -


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cDNA sequences
Sobic.003G205300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G061000 DNA binding protein, putative, expressed -
2 Sobic.010G118300 auxin-independent growth promoter protein, putative, expressed -
3 Sobic.001G159800 KIP1, putative, expressed -
4 Sobic.003G051100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
5 Sobic.002G033700 AIR9 protein, putative, expressed -
6 Sobic.006G184100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydration response related protein, putative, expressed -
7 Sobic.004G203500 actin, putative, expressed K18584: ACTR3, actin-related protein 3
8 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
9 Sobic.002G297600 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
10 Sobic.002G347900 GDP-fucose protein-O-fucosyltransferase 2, putative, expressed K03691: peptide-O-fucosyltransferase
11 Sobic.009G167100 TBC domain containing protein, expressed -
12 Sobic.009G122900 alpha 1,3-xylosyltransferase, putative, expressed K11714: rhamnogalacturonan II specific xylosyltransferase
13 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
14 Sobic.002G250550 - -
15 Sobic.003G119900 inositol-1-monophosphatase, putative, expressed K18649: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase / histidinol-phosphatase
16 Sobic.008G078000 EDM2, putative, expressed -
17 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
18 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
19 Sobic.002G276600 endoglucanase, putative, expressed -
20 Sobic.005G017000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase APK1B, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic003G205300 Sobic003G205300 Sobic009G061000 Sobic009G061000 Sobic003G205300--Sobic009G061000 Sobic010G118300 Sobic010G118300 Sobic003G205300--Sobic010G118300 Sobic001G159800 Sobic001G159800 Sobic003G205300--Sobic001G159800 Sobic003G051100 Sobic003G051100 Sobic003G205300--Sobic003G051100 Sobic002G033700 Sobic002G033700 Sobic003G205300--Sobic002G033700 Sobic006G184100 Sobic006G184100 Sobic003G205300--Sobic006G184100 Sobic004G203500 Sobic004G203500 Sobic003G205300--Sobic004G203500 Sobic002G142700 Sobic002G142700 Sobic003G205300--Sobic002G142700 Sobic002G297600 Sobic002G297600 Sobic003G205300--Sobic002G297600 Sobic006G267500 Sobic006G267500 Sobic009G061000--Sobic006G267500 Sobic009G073400 Sobic009G073400 Sobic009G061000--Sobic009G073400 Sobic001G437500 Sobic001G437500 Sobic009G061000--Sobic001G437500 Sobic002G276600 Sobic002G276600 Sobic009G061000--Sobic002G276600 Sobic009G061000--Sobic001G159800 Sobic010G090500 Sobic010G090500 Sobic009G061000--Sobic010G090500 Sobic009G206500 Sobic009G206500 Sobic009G061000--Sobic009G206500 Sobic009G167100 Sobic009G167100 Sobic009G061000--Sobic009G167100 Sobic001G051300 Sobic001G051300 Sobic009G061000--Sobic001G051300 Sobic002G214200 Sobic002G214200 Sobic010G118300--Sobic002G214200 Sobic001G507000 Sobic001G507000 Sobic010G118300--Sobic001G507000 Sobic002G253900 Sobic002G253900 Sobic010G118300--Sobic002G253900 Sobic009G026800 Sobic009G026800 Sobic010G118300--Sobic009G026800 Sobic010G118300--Sobic001G159800 Sobic010G118300--Sobic009G061000 Sobic001G203700 Sobic001G203700 Sobic010G118300--Sobic001G203700 Sobic007G139500 Sobic007G139500 Sobic010G118300--Sobic007G139500 Sobic010G118300--Sobic001G437500 Sobic001G159800--Sobic010G090500 Sobic001G159800--Sobic001G437500 Sobic001G159800--Sobic009G061000 Sobic001G159800--Sobic009G206500 Sobic001G159800--Sobic009G073400 Sobic003G017500 Sobic003G017500 Sobic001G159800--Sobic003G017500 Sobic001G196000 Sobic001G196000 Sobic001G159800--Sobic001G196000 Sobic006G173200 Sobic006G173200 Sobic001G159800--Sobic006G173200 Sobic001G507200 Sobic001G507200 Sobic001G159800--Sobic001G507200 Sobic004G242000 Sobic004G242000 Sobic003G051100--Sobic004G242000 Sobic001G005800 Sobic001G005800 Sobic003G051100--Sobic001G005800 Sobic009G212100 Sobic009G212100 Sobic003G051100--Sobic009G212100 Sobic009G254000 Sobic009G254000 Sobic003G051100--Sobic009G254000 Sobic003G051100--Sobic009G167100 Sobic007G084200 Sobic007G084200 Sobic003G051100--Sobic007G084200 Sobic006G218900 Sobic006G218900 Sobic003G051100--Sobic006G218900 Sobic004G315700 Sobic004G315700 Sobic003G051100--Sobic004G315700 Sobic003G415100 Sobic003G415100 Sobic003G051100--Sobic003G415100 Sobic003G347300 Sobic003G347300 Sobic002G033700--Sobic003G347300 Sobic002G033700--Sobic006G184100 Sobic002G033700--Sobic010G090500 Sobic008G125100 Sobic008G125100 Sobic002G033700--Sobic008G125100 Sobic004G149800 Sobic004G149800 Sobic002G033700--Sobic004G149800 Sobic009G122900 Sobic009G122900 Sobic002G033700--Sobic009G122900 Sobic001G021500 Sobic001G021500 Sobic002G033700--Sobic001G021500 Sobic006G254500 Sobic006G254500 Sobic002G033700--Sobic006G254500 Sobic004G178400 Sobic004G178400 Sobic002G033700--Sobic004G178400 Sobic006G184100--Sobic002G033700 Sobic002G377300 Sobic002G377300 Sobic006G184100--Sobic002G377300 Sobic008G190500 Sobic008G190500 Sobic006G184100--Sobic008G190500 Sobic006G184100--Sobic001G021500 Sobic006G184100--Sobic003G205300 Sobic001G099100 Sobic001G099100 Sobic006G184100--Sobic001G099100 Sobic006G184100--Sobic003G347300 Sobic003G304800 Sobic003G304800 Sobic006G184100--Sobic003G304800 Sobic004G243400 Sobic004G243400 Sobic006G184100--Sobic004G243400 Sobic004G295500 Sobic004G295500 Sobic004G203500--Sobic004G295500 Sobic010G054000 Sobic010G054000 Sobic004G203500--Sobic010G054000 Sobic007G203000 Sobic007G203000 Sobic004G203500--Sobic007G203000 Sobic006G183200 Sobic006G183200 Sobic004G203500--Sobic006G183200 Sobic004G203500--Sobic003G205300 Sobic002G388600 Sobic002G388600 Sobic004G203500--Sobic002G388600 Sobic003G240100 Sobic003G240100 Sobic004G203500--Sobic003G240100 Sobic006G193500 Sobic006G193500 Sobic004G203500--Sobic006G193500 Sobic003G410700 Sobic003G410700 Sobic004G203500--Sobic003G410700 Sobic002G399900 Sobic002G399900 Sobic002G142700--Sobic002G399900 Sobic007G051400 Sobic007G051400 Sobic002G142700--Sobic007G051400 Sobic002G208400 Sobic002G208400 Sobic002G142700--Sobic002G208400 Sobic004G256300 Sobic004G256300 Sobic002G142700--Sobic004G256300 Sobic003G221500 Sobic003G221500 Sobic002G142700--Sobic003G221500 Sobic003G222700 Sobic003G222700 Sobic002G142700--Sobic003G222700 Sobic001G229300 Sobic001G229300 Sobic002G142700--Sobic001G229300 Sobic001G373000 Sobic001G373000 Sobic002G142700--Sobic001G373000 Sobic003G360300 Sobic003G360300 Sobic002G142700--Sobic003G360300 Sobic006G029400 Sobic006G029400 Sobic002G297600--Sobic006G029400 Sobic008G013300 Sobic008G013300 Sobic002G297600--Sobic008G013300 Sobic010G059700 Sobic010G059700 Sobic002G297600--Sobic010G059700 Sobic002G297600--Sobic009G061000 Sobic002G264300 Sobic002G264300 Sobic002G297600--Sobic002G264300 Sobic003G312400 Sobic003G312400 Sobic002G297600--Sobic003G312400 Sobic003G005900 Sobic003G005900 Sobic002G297600--Sobic003G005900 Sobic001G205900 Sobic001G205900 Sobic002G297600--Sobic001G205900 Sobic001G506000 Sobic001G506000 Sobic002G297600--Sobic001G506000
Octagon: transcription factors


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