Gene annotation
Transcriptome id Sobic.009G061000.1
Synonym Sb09g005120
Functional annotation DNA binding protein, putative, expressed
UniProt C5Z134
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G14550 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os05g07790.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a036870
Brachypodium KQK07293 , KQK07292
Barley HORVU0Hr1G000320.2 , HORVU0Hr1G039960.1 , HORVU0Hr1G039960.3 , HORVU0Hr1G039960.2 , HORVU0Hr1G039960.5 , HORVU0Hr1G039960.4 , HORVU0Hr1G039960.7 , HORVU0Hr1G039960.6 , HORVU0Hr1G039960.9 , HORVU0Hr1G039960.8 , HORVU0Hr1G039960.10
Wheat TraesCS1D02G115700 , TraesCS1A02G114000 , TraesCS1A02G114000 , TraesCS1B02G134300 , TraesCS1B02G134300 , TraesCS1D02G115700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
2 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
3 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
4 Sobic.002G276600 endoglucanase, putative, expressed -
5 Sobic.001G159800 KIP1, putative, expressed -
6 Sobic.010G090500 expressed protein -
7 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
8 Sobic.009G167100 TBC domain containing protein, expressed -
9 Sobic.001G051300 BEE 1, putative, expressed -
10 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
11 Sobic.006G071628 - -
12 Sobic.003G017500 TTL1, putative, expressed -
13 Sobic.010G067600 expressed protein K16586: HAUS augmin-like complex subunit 3
14 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
15 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
16 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
17 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
18 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
19 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
20 Sobic.002G347900 GDP-fucose protein-O-fucosyltransferase 2, putative, expressed K03691: peptide-O-fucosyltransferase


Gene co-expression network
sample Sobic009G061000 Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic009G061000--Sobic006G267500 Sobic009G073400 Sobic009G073400 Sobic009G061000--Sobic009G073400 Sobic001G437500 Sobic001G437500 Sobic009G061000--Sobic001G437500 Sobic002G276600 Sobic002G276600 Sobic009G061000--Sobic002G276600 Sobic001G159800 Sobic001G159800 Sobic009G061000--Sobic001G159800 Sobic010G090500 Sobic010G090500 Sobic009G061000--Sobic010G090500 Sobic009G206500 Sobic009G206500 Sobic009G061000--Sobic009G206500 Sobic009G167100 Sobic009G167100 Sobic009G061000--Sobic009G167100 Sobic001G051300 Sobic001G051300 Sobic009G061000--Sobic001G051300 Sobic006G267500--Sobic009G061000 Sobic006G267500--Sobic009G206500 Sobic009G212100 Sobic009G212100 Sobic006G267500--Sobic009G212100 Sobic006G254500 Sobic006G254500 Sobic006G267500--Sobic006G254500 Sobic006G267500--Sobic001G437500 Sobic004G315700 Sobic004G315700 Sobic006G267500--Sobic004G315700 Sobic006G267500--Sobic010G090500 Sobic005G204700 Sobic005G204700 Sobic006G267500--Sobic005G204700 Sobic001G296800 Sobic001G296800 Sobic006G267500--Sobic001G296800 Sobic009G073400--Sobic009G061000 Sobic003G345200 Sobic003G345200 Sobic009G073400--Sobic003G345200 Sobic003G017500 Sobic003G017500 Sobic009G073400--Sobic003G017500 Sobic006G173200 Sobic006G173200 Sobic009G073400--Sobic006G173200 Sobic009G073400--Sobic001G159800 Sobic006G172200 Sobic006G172200 Sobic009G073400--Sobic006G172200 Sobic004G146300 Sobic004G146300 Sobic009G073400--Sobic004G146300 Sobic009G073400--Sobic009G206500 Sobic009G073400--Sobic010G090500 Sobic001G196000 Sobic001G196000 Sobic001G437500--Sobic001G196000 Sobic004G243800 Sobic004G243800 Sobic001G437500--Sobic004G243800 Sobic004G274800 Sobic004G274800 Sobic001G437500--Sobic004G274800 Sobic001G437500--Sobic009G206500 Sobic007G139500 Sobic007G139500 Sobic001G437500--Sobic007G139500 Sobic001G437500--Sobic001G159800 Sobic001G437500--Sobic009G061000 Sobic001G437500--Sobic006G267500 Sobic001G437500--Sobic002G276600 Sobic002G276600--Sobic009G061000 Sobic002G276600--Sobic001G437500 Sobic001G099100 Sobic001G099100 Sobic002G276600--Sobic001G099100 Sobic008G174900 Sobic008G174900 Sobic002G276600--Sobic008G174900 Sobic002G276600--Sobic006G267500 Sobic002G276600--Sobic004G243800 Sobic009G026101 Sobic009G026101 Sobic002G276600--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G276600--Sobic004G051300 Sobic002G276600--Sobic010G090500 Sobic001G159800--Sobic010G090500 Sobic001G159800--Sobic001G437500 Sobic001G159800--Sobic009G061000 Sobic001G159800--Sobic009G206500 Sobic001G159800--Sobic009G073400 Sobic001G159800--Sobic003G017500 Sobic001G159800--Sobic001G196000 Sobic001G159800--Sobic006G173200 Sobic001G507200 Sobic001G507200 Sobic001G159800--Sobic001G507200 Sobic010G090500--Sobic001G159800 Sobic010G120300 Sobic010G120300 Sobic010G090500--Sobic010G120300 Sobic010G090500--Sobic009G206500 Sobic009G079100 Sobic009G079100 Sobic010G090500--Sobic009G079100 Sobic010G090500--Sobic001G437500 Sobic010G090500--Sobic006G267500 Sobic001G073150 Sobic001G073150 Sobic010G090500--Sobic001G073150 Sobic010G090500--Sobic009G061000 Sobic009G125900 Sobic009G125900 Sobic010G090500--Sobic009G125900 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic009G206500--Sobic001G437500 Sobic001G144200 Sobic001G144200 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic010G250800 Sobic010G250800 Sobic009G167100--Sobic010G250800 Sobic009G167100--Sobic009G061000 Sobic006G257200 Sobic006G257200 Sobic009G167100--Sobic006G257200 Sobic001G385400 Sobic001G385400 Sobic009G167100--Sobic001G385400 Sobic008G015200 Sobic008G015200 Sobic009G167100--Sobic008G015200 Sobic002G320600 Sobic002G320600 Sobic009G167100--Sobic002G320600 Sobic003G027800 Sobic003G027800 Sobic009G167100--Sobic003G027800 Sobic009G052100 Sobic009G052100 Sobic009G167100--Sobic009G052100 Sobic008G192700 Sobic008G192700 Sobic009G167100--Sobic008G192700 Sobic003G289800 Sobic003G289800 Sobic001G051300--Sobic003G289800 Sobic002G383100 Sobic002G383100 Sobic001G051300--Sobic002G383100 Sobic001G051300--Sobic007G139500 Sobic009G087000 Sobic009G087000 Sobic001G051300--Sobic009G087000 Sobic006G071628 Sobic006G071628 Sobic001G051300--Sobic006G071628 Sobic003G179500 Sobic003G179500 Sobic001G051300--Sobic003G179500 Sobic010G147700 Sobic010G147700 Sobic001G051300--Sobic010G147700 Sobic001G051300--Sobic003G017500 Sobic003G201000 Sobic003G201000 Sobic001G051300--Sobic003G201000
Octagon: transcription factors


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