Gene annotation
Transcriptome id Sobic.003G047900.2,Sobic.003G047900.4,Sobic.003G047900.5,Sobic.003G047900.3,Sobic.003G047900.1
Synonym ATBOR4, Sb03g004180, BOR4
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
boron transporter protein, putative, expressed
UniProt A0A1B6Q1D4 , A0A1B6Q1C6
Pfam PF00955
Panther DB PTHR11453 PTHR11453:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006820anion transport GO:0016020membrane GO:0005452inorganic anion exchanger activity


Orthologs (automatic annotation)
TAIR AT1G15460 : HCO3- transporter family
RAP-DB (Rice) LOC_Os01g08020.1 : boron transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a023217
Brachypodium KQK02965 , KQK02966 , KQK02967 , PNT70060
Barley HORVU4Hr1G081330.7 , HORVU4Hr1G081330.6 , HORVU4Hr1G081330.5 , HORVU4Hr1G081330.4 , HORVU4Hr1G081330.3 , HORVU4Hr1G081330.2 , HORVU4Hr1G081330.1 , HORVU4Hr1G081330.8 , HORVU3Hr1G023480.4 , HORVU3Hr1G023480.5 , HORVU3Hr1G023480.2 , HORVU3Hr1G023480.3 , HORVU3Hr1G023480.1 , HORVU3Hr1G023560.1 , HORVU3Hr1G023560.3 , HORVU3Hr1G023560.2 , HORVU3Hr1G023560.4 , HORVU0Hr1G032340.1 , HORVU0Hr1G032340.2 , HORVU0Hr1G032340.3
Wheat TraesCS3D02G127300 , TraesCS4D02G326900 , TraesCS4B02G330000 , TraesCS5A02G501500 , TraesCS7B02G475400 , TraesCS3B02G145500 , TraesCS3B02G145500 , TraesCS3D02G127300 , TraesCS3D02G127300 , TraesCS3D02G127300 , TraesCS3B02G145500 , TraesCS3B02G145500 , TraesCS3B02G145500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G030600 similar to Non-specific lipid-transfer protein(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Protease inhibitor/seed storage/LTP("PubMedID : 26759170,PubMedID : 24597475")@LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.001G440000 ras-related protein, putative, expressed K07933: Rab-like protein 3
3 Sobic.006G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G518200 - K06928: nucleoside-triphosphatase
5 Sobic.009G009300 terpene synthase, putative, expressed -
6 Sobic.008G075200 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed K01627: 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)
7 Sobic.010G147500 tryptophan biosynthesis protein trpCF, putative, expressed K01817: phosphoribosylanthranilate isomerase
8 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
9 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
10 Sobic.001G154300 DNA binding protein, putative, expressed -
11 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
12 Sobic.009G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
13 Sobic.003G049200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
14 Sobic.003G326700 glycosyl hydrolases family 17, putative, expressed -
15 Sobic.004G213400 ATP8, putative, expressed -
16 Sobic.003G048600 OsGrx_S15.1 - glutaredoxin subgroup II, expressed -
17 Sobic.002G013800 NB-ARC domain containing protein, expressed -
18 Sobic.006G145600 Os4bglu16 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
19 Sobic.001G415700 expressed protein -
20 Sobic.004G157500 RNA polymerase III RPC4 domain containing protein, expressed K03026: RPC4, DNA-directed RNA polymerase III subunit RPC4


Gene co-expression network
sample Sobic003G047900 Sobic003G047900 Sobic008G030600 Sobic008G030600 Sobic003G047900--Sobic008G030600 Sobic001G440000 Sobic001G440000 Sobic003G047900--Sobic001G440000 Sobic006G086800 Sobic006G086800 Sobic003G047900--Sobic006G086800 Sobic001G518200 Sobic001G518200 Sobic003G047900--Sobic001G518200 Sobic009G009300 Sobic009G009300 Sobic003G047900--Sobic009G009300 Sobic008G075200 Sobic008G075200 Sobic003G047900--Sobic008G075200 Sobic010G147500 Sobic010G147500 Sobic003G047900--Sobic010G147500 Sobic009G231100 Sobic009G231100 Sobic003G047900--Sobic009G231100 Sobic009G070700 Sobic009G070700 Sobic003G047900--Sobic009G070700 Sobic008G030600--Sobic003G047900 Sobic008G030600--Sobic006G086800 Sobic009G218900 Sobic009G218900 Sobic008G030600--Sobic009G218900 Sobic008G030600--Sobic009G070700 Sobic008G030600--Sobic001G440000 Sobic006G145600 Sobic006G145600 Sobic008G030600--Sobic006G145600 Sobic008G030600--Sobic009G009300 Sobic003G326700 Sobic003G326700 Sobic008G030600--Sobic003G326700 Sobic008G162300 Sobic008G162300 Sobic008G030600--Sobic008G162300 Sobic002G239400 Sobic002G239400 Sobic001G440000--Sobic002G239400 Sobic010G153400 Sobic010G153400 Sobic001G440000--Sobic010G153400 Sobic009G066200 Sobic009G066200 Sobic001G440000--Sobic009G066200 Sobic004G298600 Sobic004G298600 Sobic001G440000--Sobic004G298600 Sobic001G131900 Sobic001G131900 Sobic001G440000--Sobic001G131900 Sobic003G435300 Sobic003G435300 Sobic001G440000--Sobic003G435300 Sobic004G213400 Sobic004G213400 Sobic001G440000--Sobic004G213400 Sobic001G091701 Sobic001G091701 Sobic001G440000--Sobic001G091701 Sobic002G392400 Sobic002G392400 Sobic001G440000--Sobic002G392400 Sobic008G130800 Sobic008G130800 Sobic006G086800--Sobic008G130800 Sobic004G162500 Sobic004G162500 Sobic006G086800--Sobic004G162500 Sobic006G086800--Sobic008G030600 Sobic006G086800--Sobic003G047900 Sobic009G130800 Sobic009G130800 Sobic006G086800--Sobic009G130800 Sobic003G149000 Sobic003G149000 Sobic006G086800--Sobic003G149000 Sobic001G285500 Sobic001G285500 Sobic006G086800--Sobic001G285500 Sobic006G086800--Sobic009G070700 Sobic007G090537 Sobic007G090537 Sobic006G086800--Sobic007G090537 Sobic001G518200--Sobic009G231100 Sobic002G072300 Sobic002G072300 Sobic001G518200--Sobic002G072300 Sobic009G063800 Sobic009G063800 Sobic001G518200--Sobic009G063800 Sobic001G518600 Sobic001G518600 Sobic001G518200--Sobic001G518600 Sobic003G202100 Sobic003G202100 Sobic001G518200--Sobic003G202100 Sobic001G309200 Sobic001G309200 Sobic001G518200--Sobic001G309200 Sobic003G085500 Sobic003G085500 Sobic001G518200--Sobic003G085500 Sobic001G518200--Sobic010G153400 Sobic001G518200--Sobic003G047900 Sobic009G009300--Sobic009G070700 Sobic003G173700 Sobic003G173700 Sobic009G009300--Sobic003G173700 Sobic009G136500 Sobic009G136500 Sobic009G009300--Sobic009G136500 Sobic009G009300--Sobic003G047900 Sobic009G009300--Sobic008G030600 Sobic010G268900 Sobic010G268900 Sobic009G009300--Sobic010G268900 Sobic009G009300--Sobic006G145600 Sobic009G009300--Sobic009G218900 Sobic006G175700 Sobic006G175700 Sobic009G009300--Sobic006G175700 Sobic004G319800 Sobic004G319800 Sobic008G075200--Sobic004G319800 Sobic004G047400 Sobic004G047400 Sobic008G075200--Sobic004G047400 Sobic002G317600 Sobic002G317600 Sobic008G075200--Sobic002G317600 Sobic008G181400 Sobic008G181400 Sobic008G075200--Sobic008G181400 Sobic003G223100 Sobic003G223100 Sobic008G075200--Sobic003G223100 Sobic009G151100 Sobic009G151100 Sobic008G075200--Sobic009G151100 Sobic008G075200--Sobic009G231100 Sobic009G002900 Sobic009G002900 Sobic008G075200--Sobic009G002900 Sobic004G253500 Sobic004G253500 Sobic008G075200--Sobic004G253500 Sobic001G117900 Sobic001G117900 Sobic010G147500--Sobic001G117900 Sobic001G529500 Sobic001G529500 Sobic010G147500--Sobic001G529500 Sobic010G188900 Sobic010G188900 Sobic010G147500--Sobic010G188900 Sobic002G308000 Sobic002G308000 Sobic010G147500--Sobic002G308000 Sobic010G147500--Sobic001G440000 Sobic003G204100 Sobic003G204100 Sobic010G147500--Sobic003G204100 Sobic006G095000 Sobic006G095000 Sobic010G147500--Sobic006G095000 Sobic001G248400 Sobic001G248400 Sobic010G147500--Sobic001G248400 Sobic010G147500--Sobic004G298600 Sobic009G201900 Sobic009G201900 Sobic009G231100--Sobic009G201900 Sobic002G225000 Sobic002G225000 Sobic009G231100--Sobic002G225000 Sobic002G377300 Sobic002G377300 Sobic009G231100--Sobic002G377300 Sobic009G231100--Sobic001G518200 Sobic003G420900 Sobic003G420900 Sobic009G231100--Sobic003G420900 Sobic003G223000 Sobic003G223000 Sobic009G231100--Sobic003G223000 Sobic005G031000 Sobic005G031000 Sobic009G231100--Sobic005G031000 Sobic001G104300 Sobic001G104300 Sobic009G231100--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic009G231100--Sobic005G022000 Sobic009G070600 Sobic009G070600 Sobic009G070700--Sobic009G070600 Sobic003G007800 Sobic003G007800 Sobic009G070700--Sobic003G007800 Sobic009G070700--Sobic006G175700 Sobic001G255300 Sobic001G255300 Sobic009G070700--Sobic001G255300 Sobic005G029400 Sobic005G029400 Sobic009G070700--Sobic005G029400 Sobic005G190800 Sobic005G190800 Sobic009G070700--Sobic005G190800 Sobic008G189500 Sobic008G189500 Sobic009G070700--Sobic008G189500 Sobic004G328900 Sobic004G328900 Sobic009G070700--Sobic004G328900 Sobic002G128600 Sobic002G128600 Sobic009G070700--Sobic002G128600
Octagon: transcription factors


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