Gene annotation
Transcriptome id Sobic.004G298600.1
Synonym SUVH5, SGD9, Sb04g033260
Functional annotation histone-lysine N-methyltransferase, putative, expressed
UniProt C5XS18
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF300
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G35160 : SU(VAR)3-9 homolog 5
RAP-DB (Rice) LOC_Os04g45990.1 : histone-lysine N-methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G385300 auxin-independent growth promoter protein, putative, expressed -
2 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
4 Sobic.004G026600 - -
5 Sobic.005G060100 growth regulator related protein, putative, expressed -
6 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
7 Sobic.001G433600 - -
8 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
9 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
10 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
11 Sobic.001G380700 bZIP transcription factor family protein, putative, expressed -
12 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
13 Sobic.007G102000 formin-like protein 13, putative, expressed -
14 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
15 Sobic.007G141600 ZOS8-05 - C2H2 zinc finger protein, expressed -
16 Sobic.007G102300 formin, putative, expressed -
17 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
18 Sobic.009G220700 - -
19 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
20 Sobic.007G086600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase


Gene co-expression network
sample Sobic004G298600 Sobic004G298600 Sobic001G385300 Sobic001G385300 Sobic004G298600--Sobic001G385300 Sobic001G131900 Sobic001G131900 Sobic004G298600--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic004G298600--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G298600--Sobic004G026600 Sobic005G060100 Sobic005G060100 Sobic004G298600--Sobic005G060100 Sobic001G308500 Sobic001G308500 Sobic004G298600--Sobic001G308500 Sobic001G433600 Sobic001G433600 Sobic004G298600--Sobic001G433600 Sobic007G105700 Sobic007G105700 Sobic004G298600--Sobic007G105700 Sobic003G352900 Sobic003G352900 Sobic004G298600--Sobic003G352900 Sobic003G376900 Sobic003G376900 Sobic001G385300--Sobic003G376900 Sobic002G299500 Sobic002G299500 Sobic001G385300--Sobic002G299500 Sobic001G385300--Sobic003G352900 Sobic009G163100 Sobic009G163100 Sobic001G385300--Sobic009G163100 Sobic008G171900 Sobic008G171900 Sobic001G385300--Sobic008G171900 Sobic005G045800 Sobic005G045800 Sobic001G385300--Sobic005G045800 Sobic007G141600 Sobic007G141600 Sobic001G385300--Sobic007G141600 Sobic005G020600 Sobic005G020600 Sobic001G385300--Sobic005G020600 Sobic001G385300--Sobic004G298600 Sobic001G131900--Sobic003G293400 Sobic001G131900--Sobic003G352900 Sobic004G038400 Sobic004G038400 Sobic001G131900--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G131900--Sobic001G076600 Sobic001G131900--Sobic001G385300 Sobic001G131900--Sobic005G045800 Sobic001G131900--Sobic004G298600 Sobic002G420100 Sobic002G420100 Sobic001G131900--Sobic002G420100 Sobic007G144100 Sobic007G144100 Sobic001G131900--Sobic007G144100 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic003G293400--Sobic002G420100 Sobic003G293400--Sobic004G038400 Sobic003G293400--Sobic004G026600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100 Sobic004G026600--Sobic003G293400 Sobic004G026600--Sobic004G298600 Sobic009G025700 Sobic009G025700 Sobic004G026600--Sobic009G025700 Sobic004G026600--Sobic004G198300 Sobic009G220700 Sobic009G220700 Sobic004G026600--Sobic009G220700 Sobic002G308000 Sobic002G308000 Sobic004G026600--Sobic002G308000 Sobic009G042000 Sobic009G042000 Sobic004G026600--Sobic009G042000 Sobic004G026600--Sobic001G131900 Sobic006G265800 Sobic006G265800 Sobic004G026600--Sobic006G265800 Sobic005G060100--Sobic007G105700 Sobic007G102300 Sobic007G102300 Sobic005G060100--Sobic007G102300 Sobic005G060100--Sobic001G385300 Sobic003G216600 Sobic003G216600 Sobic005G060100--Sobic003G216600 Sobic005G060100--Sobic001G433600 Sobic005G060100--Sobic004G298600 Sobic001G117900 Sobic001G117900 Sobic005G060100--Sobic001G117900 Sobic005G060100--Sobic003G352900 Sobic005G060100--Sobic001G131900 Sobic001G308500--Sobic006G265800 Sobic008G085950 Sobic008G085950 Sobic001G308500--Sobic008G085950 Sobic001G308500--Sobic001G385300 Sobic009G201000 Sobic009G201000 Sobic001G308500--Sobic009G201000 Sobic001G308500--Sobic003G352900 Sobic010G274800 Sobic010G274800 Sobic001G308500--Sobic010G274800 Sobic001G308500--Sobic009G163100 Sobic001G308500--Sobic004G298600 Sobic008G166100 Sobic008G166100 Sobic001G308500--Sobic008G166100 Sobic001G433600--Sobic001G117900 Sobic001G433600--Sobic002G308000 Sobic001G433600--Sobic005G060100 Sobic001G433600--Sobic007G105700 Sobic009G054400 Sobic009G054400 Sobic001G433600--Sobic009G054400 Sobic001G433600--Sobic004G298600 Sobic007G189100 Sobic007G189100 Sobic001G433600--Sobic007G189100 Sobic001G433600--Sobic001G131900 Sobic007G086600 Sobic007G086600 Sobic001G433600--Sobic007G086600 Sobic002G392400 Sobic002G392400 Sobic007G105700--Sobic002G392400 Sobic007G105700--Sobic002G308000 Sobic007G105700--Sobic005G060100 Sobic007G105700--Sobic001G433600 Sobic007G105700--Sobic001G385300 Sobic007G105700--Sobic001G308500 Sobic007G105700--Sobic004G298600 Sobic007G105700--Sobic008G085950 Sobic007G105700--Sobic001G117900 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G352900--Sobic003G376900 Sobic003G352900--Sobic009G201000 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600
Octagon: transcription factors


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