Gene annotation
Transcriptome id Sobic.003G003600.2,Sobic.003G003600.1
Synonym NLP7, Sb03g000490
Functional annotation similar to Nodule inception protein-like (PubMedID : 29862293)
NIN, putative, expressed
UniProt A0A1B6Q0K4 , C5XJJ3
Pfam PF00564 PF02042 PF02042
Panther DB PTHR32002 PTHR32002:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G24020 : NIN like protein 7,Plant regulator RWP-RK family protein
RAP-DB (Rice) LOC_Os01g13540.1 : NIN, putative, expressed
MaizeGDB (Corn) Zm00025a022790 , Zm00025a036009 , Zm00025a016482 , Zm00025a037727 , Zm00025a025083
Brachypodium KQK03489 , KQK03490
Barley HORVU3Hr1G032170.1 , HORVU3Hr1G032170.2
Wheat TraesCS3B02G190300 , TraesCS3D02G166900 , TraesCS3D02G166900 , TraesCS3D02G166900 , TraesCS3A02G159600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
2 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
3 Sobic.003G442700 - -
4 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
5 Sobic.001G418700 SLT1 protein, putative, expressed -
6 Sobic.003G161000 powdery mildew resistance protein PM3F, putative, expressed -
7 Sobic.008G001000 AGC_PVPK_like_kin82y.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.001G158900 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
9 Sobic.002G385700 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
10 Sobic.001G261408 - -
11 Sobic.001G433000 FAR1 family protein, expressed -
12 Sobic.001G484400 copper-transporting ATPase PAA1, putative, expressed K01533: P-type Cu2+ transporter
13 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
14 Sobic.008G117000 expressed protein K13457: RPM1, disease resistance protein RPM1
15 Sobic.002G358500 - -
16 Sobic.003G443500 cyclase/dehydrase family protein, expressed -
17 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
18 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -
19 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
20 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -


Gene co-expression network
sample Sobic003G003600 Sobic003G003600 Sobic001G065600 Sobic001G065600 Sobic003G003600--Sobic001G065600 Sobic001G073900 Sobic001G073900 Sobic003G003600--Sobic001G073900 Sobic003G442700 Sobic003G442700 Sobic003G003600--Sobic003G442700 Sobic004G001300 Sobic004G001300 Sobic003G003600--Sobic004G001300 Sobic001G418700 Sobic001G418700 Sobic003G003600--Sobic001G418700 Sobic003G161000 Sobic003G161000 Sobic003G003600--Sobic003G161000 Sobic008G001000 Sobic008G001000 Sobic003G003600--Sobic008G001000 Sobic001G158900 Sobic001G158900 Sobic003G003600--Sobic001G158900 Sobic002G385700 Sobic002G385700 Sobic003G003600--Sobic002G385700 Sobic001G065600--Sobic001G158900 Sobic001G065600--Sobic001G073900 Sobic005G188600 Sobic005G188600 Sobic001G065600--Sobic005G188600 Sobic006G010900 Sobic006G010900 Sobic001G065600--Sobic006G010900 Sobic008G094000 Sobic008G094000 Sobic001G065600--Sobic008G094000 Sobic001G484400 Sobic001G484400 Sobic001G065600--Sobic001G484400 Sobic002G036000 Sobic002G036000 Sobic001G065600--Sobic002G036000 Sobic001G003200 Sobic001G003200 Sobic001G065600--Sobic001G003200 Sobic001G065600--Sobic003G003600 Sobic003G332700 Sobic003G332700 Sobic001G073900--Sobic003G332700 Sobic008G001900 Sobic008G001900 Sobic001G073900--Sobic008G001900 Sobic008G117000 Sobic008G117000 Sobic001G073900--Sobic008G117000 Sobic003G342100 Sobic003G342100 Sobic001G073900--Sobic003G342100 Sobic001G073900--Sobic001G065600 Sobic001G531500 Sobic001G531500 Sobic001G073900--Sobic001G531500 Sobic005G001700 Sobic005G001700 Sobic001G073900--Sobic005G001700 Sobic004G235600 Sobic004G235600 Sobic001G073900--Sobic004G235600 Sobic002G049600 Sobic002G049600 Sobic001G073900--Sobic002G049600 Sobic001G465700 Sobic001G465700 Sobic003G442700--Sobic001G465700 Sobic003G442700--Sobic004G235600 Sobic003G442700--Sobic008G001900 Sobic003G442700--Sobic003G332700 Sobic009G121000 Sobic009G121000 Sobic003G442700--Sobic009G121000 Sobic002G042500 Sobic002G042500 Sobic003G442700--Sobic002G042500 Sobic001G060401 Sobic001G060401 Sobic003G442700--Sobic001G060401 Sobic003G442700--Sobic004G001300 Sobic003G442700--Sobic001G073900 Sobic001G118100 Sobic001G118100 Sobic004G001300--Sobic001G118100 Sobic007G204900 Sobic007G204900 Sobic004G001300--Sobic007G204900 Sobic004G001300--Sobic008G001000 Sobic004G001300--Sobic003G442700 Sobic004G001300--Sobic003G161000 Sobic001G098301 Sobic001G098301 Sobic004G001300--Sobic001G098301 Sobic004G001300--Sobic003G003600 Sobic003G137100 Sobic003G137100 Sobic004G001300--Sobic003G137100 Sobic004G001300--Sobic001G060401 Sobic001G433000 Sobic001G433000 Sobic001G418700--Sobic001G433000 Sobic007G136800 Sobic007G136800 Sobic001G418700--Sobic007G136800 Sobic001G418700--Sobic001G065600 Sobic001G418700--Sobic003G003600 Sobic004G174400 Sobic004G174400 Sobic001G418700--Sobic004G174400 Sobic001G418700--Sobic003G442700 Sobic001G418700--Sobic001G073900 Sobic003G343500 Sobic003G343500 Sobic001G418700--Sobic003G343500 Sobic003G396200 Sobic003G396200 Sobic001G418700--Sobic003G396200 Sobic003G161000--Sobic004G001300 Sobic001G261573 Sobic001G261573 Sobic003G161000--Sobic001G261573 Sobic010G176550 Sobic010G176550 Sobic003G161000--Sobic010G176550 Sobic002G031400 Sobic002G031400 Sobic003G161000--Sobic002G031400 Sobic003G161000--Sobic003G442700 Sobic003G161000--Sobic003G003600 Sobic003G149300 Sobic003G149300 Sobic003G161000--Sobic003G149300 Sobic005G039500 Sobic005G039500 Sobic003G161000--Sobic005G039500 Sobic002G402600 Sobic002G402600 Sobic003G161000--Sobic002G402600 Sobic001G491200 Sobic001G491200 Sobic008G001000--Sobic001G491200 Sobic008G001000--Sobic004G001300 Sobic001G159400 Sobic001G159400 Sobic008G001000--Sobic001G159400 Sobic008G001000--Sobic003G003600 Sobic008G001000--Sobic003G161000 Sobic001G090500 Sobic001G090500 Sobic008G001000--Sobic001G090500 Sobic003G015600 Sobic003G015600 Sobic008G001000--Sobic003G015600 Sobic008G001000--Sobic003G442700 Sobic001G031300 Sobic001G031300 Sobic008G001000--Sobic001G031300 Sobic001G158900--Sobic001G065600 Sobic001G158900--Sobic002G036000 Sobic001G158900--Sobic005G188600 Sobic001G158900--Sobic001G003200 Sobic006G188000 Sobic006G188000 Sobic001G158900--Sobic006G188000 Sobic001G158900--Sobic006G010900 Sobic001G158900--Sobic008G117000 Sobic005G101300 Sobic005G101300 Sobic001G158900--Sobic005G101300 Sobic002G403600 Sobic002G403600 Sobic001G158900--Sobic002G403600 Sobic001G233400 Sobic001G233400 Sobic002G385700--Sobic001G233400 Sobic001G536800 Sobic001G536800 Sobic002G385700--Sobic001G536800 Sobic002G385700--Sobic003G137100 Sobic001G069000 Sobic001G069000 Sobic002G385700--Sobic001G069000 Sobic006G225200 Sobic006G225200 Sobic002G385700--Sobic006G225200 Sobic006G103400 Sobic006G103400 Sobic002G385700--Sobic006G103400 Sobic010G096300 Sobic010G096300 Sobic002G385700--Sobic010G096300 Sobic002G385700--Sobic003G003600 Sobic004G327700 Sobic004G327700 Sobic002G385700--Sobic004G327700
Octagon: transcription factors


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