Gene annotation
Transcriptome id Sobic.002G420800.1,Sobic.002G420800.2
Synonym Sb02g043220
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
stress responsive protein, putative, expressed
UniProt A0A1B6QGD5 , A0A1W0W7W0
Pfam PF14200
Panther DB PTHR31257 PTHR31257:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39050 : hydroxyproline-rich glycoprotein family protein
RAP-DB (Rice) LOC_Os07g48490.2 : stress responsive protein, putative, expressed
MaizeGDB (Corn) Zm00025a015465 , Zm00025a015464 , Zm00025a049190 , Zm00025a049191 , Zm00025a049189 , Zm00025a002286 , Zm00025a038138
Brachypodium KQK21868 , KQK14587 , KQK14589 , KQK14588
Barley HORVU2Hr1G017440.14 , HORVU2Hr1G017440.15 , HORVU2Hr1G017440.12 , HORVU2Hr1G017440.13 , HORVU2Hr1G017440.10 , HORVU2Hr1G017440.11 , HORVU2Hr1G017420.4 , HORVU2Hr1G017420.3 , HORVU2Hr1G017420.1 , HORVU4Hr1G051320.1 , HORVU4Hr1G051320.2 , HORVU4Hr1G051320.4 , HORVU2Hr1G017440.8 , HORVU2Hr1G017440.9 , HORVU2Hr1G017440.4 , HORVU2Hr1G017420.2 , HORVU2Hr1G017440.6 , HORVU2Hr1G017440.7 , HORVU2Hr1G017440.1 , HORVU2Hr1G017440.2 , HORVU2Hr1G017440.3 , HORVU2Hr1G017450.13 , HORVU2Hr1G017450.12 , HORVU2Hr1G017450.11 , HORVU2Hr1G017450.10 , HORVU7Hr1G121560.9 , HORVU7Hr1G121560.8 , HORVU7Hr1G121560.1 , HORVU7Hr1G121560.2 , HORVU7Hr1G121560.3 , HORVU7Hr1G121560.5 , HORVU7Hr1G121560.6 , HORVU7Hr1G121560.7 , HORVU4Hr1G051320.3 , HORVU7Hr1G121560.4 , HORVU2Hr1G017450.9 , HORVU2Hr1G017450.8 , HORVU2Hr1G017450.3 , HORVU2Hr1G017450.2 , HORVU2Hr1G017450.1 , HORVU2Hr1G017450.6 , HORVU2Hr1G017450.4 , HORVU2Hr1G017440.5
Wheat TraesCS2A02G101700 , TraesCS4D02G175900 , TraesCS4D02G175900 , TraesCS4D02G175900 , TraesCS7B02G418100 , TraesCS7B02G474700 , TraesCSU02G100100 , TraesCSU02G100100 , TraesCS2D02G101000 , TraesCS2B02G118800 , TraesCS2D02G101200 , TraesCS2A02G101700 , TraesCS2B02G118900 , TraesCS2B02G118900 , TraesCSU02G267300 , TraesCS4B02G173700 , TraesCS4B02G173700 , TraesCS4B02G173700 , TraesCS2A02G101600 , TraesCS2A02G101800 , TraesCS4A02G130800 , TraesCS4A02G130800 , TraesCS4A02G130800 , TraesCS7D02G537900 , TraesCS2D02G101100 , TraesCS2B02G118700 , TraesCS2B02G118800 , TraesCS2D02G101100
Populus -


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cDNA sequences
Sobic.002G420800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G040000 - -
2 Sobic.009G090250 - -
3 Sobic.005G173900 - -
4 Sobic.001G246400 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
5 Sobic.005G174500 - -
6 Sobic.007G128400 expressed protein -
7 Sobic.001G270600 - -
8 Sobic.002G267700 bZIP family transcription factor, putative, expressed -
9 Sobic.006G117300 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
10 Sobic.006G070830 - K01193: INV, beta-fructofuranosidase
11 Sobic.003G321500 Homeobox domain containing protein, expressed -
12 Sobic.002G007700 nodulin family protein, putative, expressed -
13 Sobic.002G089500 DEF8 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.002G302200 expressed protein -
15 Sobic.008G184100 aspartic proteinase, putative, expressed -
16 Sobic.003G091500 expressed protein -
17 Sobic.003G207100 expressed protein -
18 Sobic.003G415800 DEF9 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.005G174200 - -
20 Sobic.003G207600 OsFBD5 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic002G420800 Sobic002G420800 Sobic007G040000 Sobic007G040000 Sobic002G420800--Sobic007G040000 Sobic009G090250 Sobic009G090250 Sobic002G420800--Sobic009G090250 Sobic005G173900 Sobic005G173900 Sobic002G420800--Sobic005G173900 Sobic001G246400 Sobic001G246400 Sobic002G420800--Sobic001G246400 Sobic005G174500 Sobic005G174500 Sobic002G420800--Sobic005G174500 Sobic007G128400 Sobic007G128400 Sobic002G420800--Sobic007G128400 Sobic001G270600 Sobic001G270600 Sobic002G420800--Sobic001G270600 Sobic002G267700 Sobic002G267700 Sobic002G420800--Sobic002G267700 Sobic006G117300 Sobic006G117300 Sobic002G420800--Sobic006G117300 Sobic007G040000--Sobic009G090250 Sobic007G040000--Sobic006G117300 Sobic007G040000--Sobic005G174500 Sobic007G040000--Sobic005G173900 Sobic003G321500 Sobic003G321500 Sobic007G040000--Sobic003G321500 Sobic007G040000--Sobic001G246400 Sobic007G040000--Sobic001G270600 Sobic006G070830 Sobic006G070830 Sobic007G040000--Sobic006G070830 Sobic007G040000--Sobic002G267700 Sobic009G090250--Sobic001G246400 Sobic009G090250--Sobic005G174500 Sobic009G090250--Sobic007G040000 Sobic009G090250--Sobic003G321500 Sobic009G090250--Sobic001G270600 Sobic009G090250--Sobic006G117300 Sobic009G090250--Sobic005G173900 Sobic003G207600 Sobic003G207600 Sobic009G090250--Sobic003G207600 Sobic002G007700 Sobic002G007700 Sobic009G090250--Sobic002G007700 Sobic005G173900--Sobic007G040000 Sobic005G173900--Sobic005G174500 Sobic005G173900--Sobic009G090250 Sobic005G173900--Sobic001G246400 Sobic003G211600 Sobic003G211600 Sobic005G173900--Sobic003G211600 Sobic001G374600 Sobic001G374600 Sobic005G173900--Sobic001G374600 Sobic002G302200 Sobic002G302200 Sobic005G173900--Sobic002G302200 Sobic005G173900--Sobic001G270600 Sobic005G173900--Sobic006G070830 Sobic001G246400--Sobic009G090250 Sobic001G246400--Sobic005G174500 Sobic001G246400--Sobic007G040000 Sobic001G246400--Sobic003G321500 Sobic001G246400--Sobic006G117300 Sobic001G246400--Sobic001G270600 Sobic001G246400--Sobic003G207600 Sobic001G246400--Sobic005G173900 Sobic001G246400--Sobic002G007700 Sobic005G174500--Sobic009G090250 Sobic005G174500--Sobic001G246400 Sobic005G174500--Sobic007G040000 Sobic005G174500--Sobic005G173900 Sobic005G174500--Sobic002G007700 Sobic005G174500--Sobic006G117300 Sobic003G091500 Sobic003G091500 Sobic005G174500--Sobic003G091500 Sobic002G089500 Sobic002G089500 Sobic005G174500--Sobic002G089500 Sobic003G207100 Sobic003G207100 Sobic005G174500--Sobic003G207100 Sobic007G128400--Sobic006G117300 Sobic007G128400--Sobic007G040000 Sobic007G128400--Sobic005G174500 Sobic007G128400--Sobic009G090250 Sobic007G128400--Sobic001G246400 Sobic007G128400--Sobic003G321500 Sobic007G128400--Sobic002G089500 Sobic007G128400--Sobic002G267700 Sobic001G392900 Sobic001G392900 Sobic007G128400--Sobic001G392900 Sobic001G270600--Sobic009G090250 Sobic001G270600--Sobic007G040000 Sobic001G270600--Sobic003G321500 Sobic003G415800 Sobic003G415800 Sobic001G270600--Sobic003G415800 Sobic001G270600--Sobic001G246400 Sobic001G270600--Sobic005G173900 Sobic001G270600--Sobic006G117300 Sobic001G270600--Sobic005G174500 Sobic009G006800 Sobic009G006800 Sobic001G270600--Sobic009G006800 Sobic005G033600 Sobic005G033600 Sobic002G267700--Sobic005G033600 Sobic002G267700--Sobic006G070830 Sobic008G031400 Sobic008G031400 Sobic002G267700--Sobic008G031400 Sobic006G031000 Sobic006G031000 Sobic002G267700--Sobic006G031000 Sobic002G267700--Sobic005G174500 Sobic002G267700--Sobic002G089500 Sobic005G032500 Sobic005G032500 Sobic002G267700--Sobic005G032500 Sobic002G267700--Sobic003G091500 Sobic002G267700--Sobic006G117300 Sobic006G117300--Sobic007G040000 Sobic006G117300--Sobic003G321500 Sobic006G117300--Sobic009G090250 Sobic006G117300--Sobic005G174500 Sobic006G117300--Sobic001G246400 Sobic006G117300--Sobic006G031000 Sobic006G117300--Sobic001G270600 Sobic006G117300--Sobic002G267700 Sobic006G117300--Sobic002G089500
Octagon: transcription factors


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