Gene annotation
Transcriptome id Sobic.002G276400.1
Synonym Sb02g030970
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
tyrosine protein kinase domain containing protein, putative, expressed
UniProt C5X687
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF75
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G47070 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g36320.1 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a018481 , Zm00025a014445 , Zm00025a047803 , Zm00025a010358
Brachypodium KQJ91183 , KQK23335 , KQK11777
Barley HORVU7Hr1G091520.10 , HORVU7Hr1G091520.11 , HORVU5Hr1G082310.5 , HORVU5Hr1G082310.4 , HORVU5Hr1G082310.7 , HORVU5Hr1G082310.6 , HORVU5Hr1G082310.1 , HORVU5Hr1G082310.3 , HORVU5Hr1G082310.2 , HORVU7Hr1G091520.8 , HORVU7Hr1G091520.9 , HORVU7Hr1G091520.2 , HORVU7Hr1G091520.3 , HORVU7Hr1G091520.4 , HORVU7Hr1G091520.5 , HORVU7Hr1G091520.6 , HORVU7Hr1G091520.7
Wheat TraesCS5D02G329100 , TraesCS7B02G288300 , TraesCS7D02G381900 , TraesCS7D02G381900 , TraesCS5A02G322300 , TraesCS7A02G385300 , TraesCS7A02G385300
Populus -


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cDNA sequences
Sobic.002G276400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
2 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
5 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
6 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
7 Sobic.010G076700 expressed protein -
8 Sobic.001G476400 - -
9 Sobic.009G071800 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
10 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
12 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
14 Sobic.004G283300 AP2 domain containing protein, expressed -
15 Sobic.001G398500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@long cell-linked locus protein, putative, expressed -
16 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
18 Sobic.010G265600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Protein of unknown function (DUF581)(PubMedID : 28640841)@DUF581 domain containing protein, expressed -
19 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -


Gene co-expression network
sample Sobic002G276400 Sobic002G276400 Sobic001G081600 Sobic001G081600 Sobic002G276400--Sobic001G081600 Sobic002G203000 Sobic002G203000 Sobic002G276400--Sobic002G203000 Sobic002G197600 Sobic002G197600 Sobic002G276400--Sobic002G197600 Sobic009G170100 Sobic009G170100 Sobic002G276400--Sobic009G170100 Sobic001G473900 Sobic001G473900 Sobic002G276400--Sobic001G473900 Sobic002G330300 Sobic002G330300 Sobic002G276400--Sobic002G330300 Sobic010G076700 Sobic010G076700 Sobic002G276400--Sobic010G076700 Sobic001G476400 Sobic001G476400 Sobic002G276400--Sobic001G476400 Sobic009G071800 Sobic009G071800 Sobic002G276400--Sobic009G071800 Sobic001G462800 Sobic001G462800 Sobic001G081600--Sobic001G462800 Sobic002G217100 Sobic002G217100 Sobic001G081600--Sobic002G217100 Sobic006G210300 Sobic006G210300 Sobic001G081600--Sobic006G210300 Sobic004G283300 Sobic004G283300 Sobic001G081600--Sobic004G283300 Sobic001G081600--Sobic002G197600 Sobic004G281200 Sobic004G281200 Sobic001G081600--Sobic004G281200 Sobic002G344700 Sobic002G344700 Sobic001G081600--Sobic002G344700 Sobic004G025000 Sobic004G025000 Sobic001G081600--Sobic004G025000 Sobic001G081600--Sobic001G476400 Sobic001G077700 Sobic001G077700 Sobic002G203000--Sobic001G077700 Sobic002G203000--Sobic009G071800 Sobic006G095600 Sobic006G095600 Sobic002G203000--Sobic006G095600 Sobic001G489600 Sobic001G489600 Sobic002G203000--Sobic001G489600 Sobic002G203000--Sobic010G076700 Sobic009G258300 Sobic009G258300 Sobic002G203000--Sobic009G258300 Sobic002G203000--Sobic001G473900 Sobic007G057100 Sobic007G057100 Sobic002G203000--Sobic007G057100 Sobic002G248100 Sobic002G248100 Sobic002G203000--Sobic002G248100 Sobic002G197600--Sobic001G081600 Sobic002G197600--Sobic002G217100 Sobic002G197600--Sobic001G462800 Sobic002G197600--Sobic004G281200 Sobic002G197600--Sobic006G210300 Sobic002G367900 Sobic002G367900 Sobic002G197600--Sobic002G367900 Sobic008G036000 Sobic008G036000 Sobic002G197600--Sobic008G036000 Sobic004G244100 Sobic004G244100 Sobic002G197600--Sobic004G244100 Sobic004G176900 Sobic004G176900 Sobic002G197600--Sobic004G176900 Sobic006G032200 Sobic006G032200 Sobic009G170100--Sobic006G032200 Sobic009G170100--Sobic004G283300 Sobic001G050800 Sobic001G050800 Sobic009G170100--Sobic001G050800 Sobic009G170100--Sobic004G281200 Sobic009G170100--Sobic001G081600 Sobic001G063600 Sobic001G063600 Sobic009G170100--Sobic001G063600 Sobic003G342600 Sobic003G342600 Sobic009G170100--Sobic003G342600 Sobic009G170100--Sobic002G344700 Sobic010G016500 Sobic010G016500 Sobic009G170100--Sobic010G016500 Sobic001G473900--Sobic001G476400 Sobic010G076600 Sobic010G076600 Sobic001G473900--Sobic010G076600 Sobic001G473900--Sobic002G203000 Sobic001G473900--Sobic009G071800 Sobic001G473900--Sobic001G077700 Sobic001G473900--Sobic006G095600 Sobic001G209800 Sobic001G209800 Sobic001G473900--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic001G473900--Sobic003G268700 Sobic001G473900--Sobic002G248100 Sobic008G016900 Sobic008G016900 Sobic002G330300--Sobic008G016900 Sobic002G379400 Sobic002G379400 Sobic002G330300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G330300--Sobic010G052800 Sobic010G228000 Sobic010G228000 Sobic002G330300--Sobic010G228000 Sobic007G011000 Sobic007G011000 Sobic002G330300--Sobic007G011000 Sobic002G330300--Sobic004G025000 Sobic002G118600 Sobic002G118600 Sobic002G330300--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G330300--Sobic006G263100 Sobic007G188100 Sobic007G188100 Sobic002G330300--Sobic007G188100 Sobic010G076700--Sobic009G071800 Sobic010G076700--Sobic002G203000 Sobic009G231400 Sobic009G231400 Sobic010G076700--Sobic009G231400 Sobic010G076700--Sobic006G095600 Sobic010G076700--Sobic001G077700 Sobic010G076700--Sobic001G476400 Sobic009G163900 Sobic009G163900 Sobic010G076700--Sobic009G163900 Sobic010G076700--Sobic004G283300 Sobic010G076700--Sobic004G025000 Sobic001G476400--Sobic001G063600 Sobic001G051600 Sobic001G051600 Sobic001G476400--Sobic001G051600 Sobic001G476400--Sobic001G473900 Sobic001G476400--Sobic010G076600 Sobic001G476400--Sobic001G081600 Sobic010G080400 Sobic010G080400 Sobic001G476400--Sobic010G080400 Sobic001G476400--Sobic006G095600 Sobic001G476400--Sobic004G283300 Sobic001G476400--Sobic001G489600 Sobic009G071800--Sobic001G077700 Sobic009G071800--Sobic002G203000 Sobic010G234600 Sobic010G234600 Sobic009G071800--Sobic010G234600 Sobic009G071800--Sobic002G248100 Sobic002G294700 Sobic002G294700 Sobic009G071800--Sobic002G294700 Sobic009G071800--Sobic010G076700 Sobic001G398500 Sobic001G398500 Sobic009G071800--Sobic001G398500 Sobic009G071800--Sobic001G473900 Sobic009G071800--Sobic006G095600
Octagon: transcription factors


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