Gene annotation
Transcriptome id Sobic.002G268400.1
Synonym Sb02g030240
Functional annotation expressed protein
UniProt C5X619
Pfam -
Panther DB PTHR34797
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45980 : -
RAP-DB (Rice) LOC_Os04g08310.1 : expressed protein
MaizeGDB (Corn) Zm00025a014376 , Zm00025a047697
Brachypodium KQJ81412
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G057900 26S protease regulatory subunit 6A, putative, expressed K03065: PSMC3, 26S proteasome regulatory subunit T5
2 Sobic.001G152000 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
3 Sobic.004G074300 phytoene dehydrogenase-like, putative, expressed K16750: biogenesis of lysosome-related organelles complex 1 subunit 2
4 Sobic.006G252100 mediator of RNA polymerase II transcription subunit 7, putative, expressed K15148: mediator of RNA polymerase II transcription subunit 7
5 Sobic.009G033900 snurportin-1, putative, expressed K13151: SNUPN, snurportin-1
6 Sobic.006G270900 acyl-CoA-binding domain-containing protein 6, putative, expressed -
7 Sobic.006G183000 RING zinc finger protein, putative, expressed -
8 Sobic.004G356900 - K13025: EIF4A3, ATP-dependent RNA helicase
9 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
10 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
11 Sobic.002G306400 zinc finger family protein, putative, expressed -
12 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
13 Sobic.006G278700 expressed protein -
14 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
15 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
16 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
17 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.003G314100 AGAP000951-PA, putative, expressed -
19 Sobic.002G113900 lipid binding protein, putative, expressed -
20 Sobic.008G004400 GIL1, putative, expressed -


Gene co-expression network
sample Sobic002G268400 Sobic002G268400 Sobic010G057900 Sobic010G057900 Sobic002G268400--Sobic010G057900 Sobic001G152000 Sobic001G152000 Sobic002G268400--Sobic001G152000 Sobic004G074300 Sobic004G074300 Sobic002G268400--Sobic004G074300 Sobic006G252100 Sobic006G252100 Sobic002G268400--Sobic006G252100 Sobic009G033900 Sobic009G033900 Sobic002G268400--Sobic009G033900 Sobic006G270900 Sobic006G270900 Sobic002G268400--Sobic006G270900 Sobic006G183000 Sobic006G183000 Sobic002G268400--Sobic006G183000 Sobic004G356900 Sobic004G356900 Sobic002G268400--Sobic004G356900 Sobic003G439800 Sobic003G439800 Sobic002G268400--Sobic003G439800 Sobic010G057900--Sobic002G268400 Sobic006G101700 Sobic006G101700 Sobic010G057900--Sobic006G101700 Sobic002G143000 Sobic002G143000 Sobic010G057900--Sobic002G143000 Sobic001G078800 Sobic001G078800 Sobic010G057900--Sobic001G078800 Sobic003G314100 Sobic003G314100 Sobic010G057900--Sobic003G314100 Sobic009G192000 Sobic009G192000 Sobic010G057900--Sobic009G192000 Sobic010G205300 Sobic010G205300 Sobic010G057900--Sobic010G205300 Sobic001G458700 Sobic001G458700 Sobic010G057900--Sobic001G458700 Sobic010G057900--Sobic004G356900 Sobic001G152000--Sobic002G268400 Sobic001G152000--Sobic004G074300 Sobic001G152000--Sobic009G033900 Sobic001G294900 Sobic001G294900 Sobic001G152000--Sobic001G294900 Sobic004G019600 Sobic004G019600 Sobic001G152000--Sobic004G019600 Sobic001G152000--Sobic006G252100 Sobic001G009800 Sobic001G009800 Sobic001G152000--Sobic001G009800 Sobic003G405700 Sobic003G405700 Sobic001G152000--Sobic003G405700 Sobic001G152000--Sobic006G183000 Sobic004G074300--Sobic002G268400 Sobic003G119400 Sobic003G119400 Sobic004G074300--Sobic003G119400 Sobic004G074300--Sobic001G152000 Sobic004G074300--Sobic009G033900 Sobic001G263000 Sobic001G263000 Sobic004G074300--Sobic001G263000 Sobic002G259400 Sobic002G259400 Sobic004G074300--Sobic002G259400 Sobic004G074300--Sobic010G057900 Sobic004G077600 Sobic004G077600 Sobic004G074300--Sobic004G077600 Sobic006G054500 Sobic006G054500 Sobic004G074300--Sobic006G054500 Sobic006G252100--Sobic002G268400 Sobic006G252100--Sobic001G152000 Sobic006G252100--Sobic009G033900 Sobic006G216000 Sobic006G216000 Sobic006G252100--Sobic006G216000 Sobic003G220700 Sobic003G220700 Sobic006G252100--Sobic003G220700 Sobic006G094600 Sobic006G094600 Sobic006G252100--Sobic006G094600 Sobic001G226100 Sobic001G226100 Sobic006G252100--Sobic001G226100 Sobic006G252100--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G252100--Sobic001G370300 Sobic009G033900--Sobic006G183000 Sobic009G033900--Sobic002G268400 Sobic001G249700 Sobic001G249700 Sobic009G033900--Sobic001G249700 Sobic009G033900--Sobic004G074300 Sobic009G033900--Sobic001G263000 Sobic009G033900--Sobic001G152000 Sobic004G057800 Sobic004G057800 Sobic009G033900--Sobic004G057800 Sobic010G269100 Sobic010G269100 Sobic009G033900--Sobic010G269100 Sobic009G033900--Sobic006G252100 Sobic006G270900--Sobic002G268400 Sobic002G113900 Sobic002G113900 Sobic006G270900--Sobic002G113900 Sobic001G281600 Sobic001G281600 Sobic006G270900--Sobic001G281600 Sobic006G270900--Sobic004G356900 Sobic010G279700 Sobic010G279700 Sobic006G270900--Sobic010G279700 Sobic006G270900--Sobic003G405700 Sobic006G270900--Sobic010G057900 Sobic009G004600 Sobic009G004600 Sobic006G270900--Sobic009G004600 Sobic001G143500 Sobic001G143500 Sobic006G270900--Sobic001G143500 Sobic002G129000 Sobic002G129000 Sobic006G183000--Sobic002G129000 Sobic006G183000--Sobic001G294900 Sobic006G183000--Sobic009G033900 Sobic006G109700 Sobic006G109700 Sobic006G183000--Sobic006G109700 Sobic006G183000--Sobic002G268400 Sobic001G136900 Sobic001G136900 Sobic006G183000--Sobic001G136900 Sobic009G050700 Sobic009G050700 Sobic006G183000--Sobic009G050700 Sobic006G183000--Sobic003G405700 Sobic006G183000--Sobic006G094600 Sobic008G004400 Sobic008G004400 Sobic004G356900--Sobic008G004400 Sobic004G226800 Sobic004G226800 Sobic004G356900--Sobic004G226800 Sobic004G356900--Sobic009G004600 Sobic010G193800 Sobic010G193800 Sobic004G356900--Sobic010G193800 Sobic004G356900--Sobic010G205300 Sobic004G356900--Sobic006G101700 Sobic004G232800 Sobic004G232800 Sobic004G356900--Sobic004G232800 Sobic004G356900--Sobic002G268400 Sobic003G239800 Sobic003G239800 Sobic004G356900--Sobic003G239800 Sobic003G439800--Sobic001G143500 Sobic006G252700 Sobic006G252700 Sobic003G439800--Sobic006G252700 Sobic006G278700 Sobic006G278700 Sobic003G439800--Sobic006G278700 Sobic010G018700 Sobic010G018700 Sobic003G439800--Sobic010G018700 Sobic003G439800--Sobic002G268400 Sobic001G142100 Sobic001G142100 Sobic003G439800--Sobic001G142100 Sobic009G058500 Sobic009G058500 Sobic003G439800--Sobic009G058500 Sobic003G401100 Sobic003G401100 Sobic003G439800--Sobic003G401100 Sobic003G439800--Sobic010G279700
Octagon: transcription factors


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