Gene annotation
Transcriptome id Sobic.001G459200.1
Synonym Sb01g043100
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1Z5SAR5
Pfam -
Panther DB PTHR22970 PTHR22970:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G03470 : ELM2 domain-containing protein
RAP-DB (Rice) LOC_Os03g31230.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a053100 , Zm00025a001274
Brachypodium KQJ91903 , KQJ91902
Barley HORVU5Hr1G057230.1 , HORVU5Hr1G057230.2 , HORVU5Hr1G057230.3 , HORVU5Hr1G057230.4
Wheat TraesCS5D02G120400 , TraesCS5D02G120400 , TraesCS5B02G110700 , TraesCS5B02G110700 , TraesCS5B02G110700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
2 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
3 Sobic.001G499300 high-affinity nickel-transport family protein, putative, expressed -
4 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
5 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
7 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
8 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
9 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
10 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
11 Sobic.001G281400 expressed protein -
12 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
13 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
14 Sobic.004G330700 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
15 Sobic.009G203100 expressed protein -
16 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
17 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
18 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
19 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
20 Sobic.006G141500 expressed protein -


Gene co-expression network
sample Sobic001G459200 Sobic001G459200 Sobic009G185800 Sobic009G185800 Sobic001G459200--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic001G459200--Sobic003G253000 Sobic001G499300 Sobic001G499300 Sobic001G459200--Sobic001G499300 Sobic004G055200 Sobic004G055200 Sobic001G459200--Sobic004G055200 Sobic002G267500 Sobic002G267500 Sobic001G459200--Sobic002G267500 Sobic002G046100 Sobic002G046100 Sobic001G459200--Sobic002G046100 Sobic004G272800 Sobic004G272800 Sobic001G459200--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic001G459200--Sobic003G181500 Sobic003G130800 Sobic003G130800 Sobic001G459200--Sobic003G130800 Sobic009G185800--Sobic001G459200 Sobic004G049900 Sobic004G049900 Sobic009G185800--Sobic004G049900 Sobic009G185800--Sobic003G253000 Sobic009G185800--Sobic003G130800 Sobic006G108400 Sobic006G108400 Sobic009G185800--Sobic006G108400 Sobic003G350300 Sobic003G350300 Sobic009G185800--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic009G185800--Sobic004G330700 Sobic009G185800--Sobic004G272800 Sobic009G185800--Sobic003G181500 Sobic006G141500 Sobic006G141500 Sobic003G253000--Sobic006G141500 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic003G253000--Sobic001G459200 Sobic002G345300 Sobic002G345300 Sobic003G253000--Sobic002G345300 Sobic003G253000--Sobic002G046100 Sobic003G253000--Sobic009G185800 Sobic003G253000--Sobic006G108400 Sobic001G281400 Sobic001G281400 Sobic001G499300--Sobic001G281400 Sobic009G008900 Sobic009G008900 Sobic001G499300--Sobic009G008900 Sobic001G177800 Sobic001G177800 Sobic001G499300--Sobic001G177800 Sobic004G187900 Sobic004G187900 Sobic001G499300--Sobic004G187900 Sobic001G499300--Sobic001G459200 Sobic006G173900 Sobic006G173900 Sobic001G499300--Sobic006G173900 Sobic001G393500 Sobic001G393500 Sobic001G499300--Sobic001G393500 Sobic002G312400 Sobic002G312400 Sobic001G499300--Sobic002G312400 Sobic001G477300 Sobic001G477300 Sobic001G499300--Sobic001G477300 Sobic008G033600 Sobic008G033600 Sobic004G055200--Sobic008G033600 Sobic004G055200--Sobic001G459200 Sobic004G055200--Sobic003G130800 Sobic004G055200--Sobic004G330700 Sobic004G055200--Sobic001G281400 Sobic004G055200--Sobic004G187900 Sobic004G055200--Sobic001G499300 Sobic004G055200--Sobic001G477300 Sobic007G051000 Sobic007G051000 Sobic004G055200--Sobic007G051000 Sobic002G267500--Sobic001G281400 Sobic002G267500--Sobic004G272800 Sobic002G267500--Sobic002G046100 Sobic002G267500--Sobic003G253000 Sobic010G149300 Sobic010G149300 Sobic002G267500--Sobic010G149300 Sobic002G267500--Sobic002G345300 Sobic002G267500--Sobic001G459200 Sobic009G143400 Sobic009G143400 Sobic002G267500--Sobic009G143400 Sobic002G267500--Sobic006G173900 Sobic003G285800 Sobic003G285800 Sobic002G046100--Sobic003G285800 Sobic002G046100--Sobic001G281400 Sobic002G046100--Sobic002G345300 Sobic002G187500 Sobic002G187500 Sobic002G046100--Sobic002G187500 Sobic010G086200 Sobic010G086200 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic002G046100--Sobic001G477300 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900 Sobic004G272800--Sobic002G267500 Sobic004G272800--Sobic001G281400 Sobic004G272800--Sobic003G253000 Sobic001G048832 Sobic001G048832 Sobic004G272800--Sobic001G048832 Sobic004G272800--Sobic002G190900 Sobic004G272800--Sobic002G345300 Sobic004G272800--Sobic002G046100 Sobic010G041600 Sobic010G041600 Sobic004G272800--Sobic010G041600 Sobic005G188100 Sobic005G188100 Sobic004G272800--Sobic005G188100 Sobic003G181500--Sobic004G187900 Sobic003G181500--Sobic003G350300 Sobic003G181500--Sobic010G149300 Sobic003G249800 Sobic003G249800 Sobic003G181500--Sobic003G249800 Sobic001G288800 Sobic001G288800 Sobic003G181500--Sobic001G288800 Sobic003G181500--Sobic001G281400 Sobic009G023200 Sobic009G023200 Sobic003G181500--Sobic009G023200 Sobic002G211900 Sobic002G211900 Sobic003G181500--Sobic002G211900 Sobic003G181500--Sobic002G046100 Sobic003G130800--Sobic009G185800 Sobic003G130800--Sobic003G253000 Sobic003G130800--Sobic001G459200 Sobic006G180200 Sobic006G180200 Sobic003G130800--Sobic006G180200 Sobic003G130800--Sobic002G345300 Sobic003G130800--Sobic004G049900 Sobic003G130800--Sobic004G055200 Sobic010G135000 Sobic010G135000 Sobic003G130800--Sobic010G135000 Sobic003G130800--Sobic003G181500
Octagon: transcription factors


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