Gene annotation
| Transcriptome id | Sobic.001G249600.1 |
|---|---|
| Synonym | Sb01g022080, ATGSTU17, GST30B, GST30, ERD9 |
| Functional annotation | glutathione S-transferase, putative, expressed |
| UniProt | C5WM50 |
| Pfam | PF13417 |
| Panther DB | PTHR11260 PTHR11260:SF231 |
| NCBI CDD | KOG0406; Glutathione S-transferase |
| KEGG Orthology | K00799; GST, glutathione S-transferase |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT1G10370 : Glutathione S-transferase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os10g25590.1 : glutathione S-transferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a006937 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G230900 | function as typical DFRs by accepting dihydroflavonol substrates(PubMedID : 20529887)@Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dihydroflavonol-4-reductase, putative, expressed | K13082: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase |
| 2 | Sobic.006G227000 | leucoanthocyanidin reductase, putative, expressed | K08695: anthocyanidin reductase |
| 3 | Sobic.001G249500 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 4 | Sobic.002G128600 | lecithin:cholesterol acyltransferase, putative, expressed | K06129: lysophospholipase III |
| 5 | Sobic.004G000700 | SbANS is not expressed during fungal or MeJA-induced 3-deoxyanthocyanidin accumulation(PubMedID : 20529887)@leucoanthocyanidin dioxygenase, putative, expressed | K05277: anthocyanidin synthase |
| 6 | Sobic.006G253900 | absent or strongly suppressed during the accumulation of 3-deoxyanthocyanidins(PubMedID : 20529887)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed | K00475: naringenin 3-dioxygenase |
| 7 | Sobic.005G190800 | Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed | K05928: tocopherol O-methyltransferase |
| 8 | Sobic.006G175700 | down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed | - |
| 9 | Sobic.007G069500 | expressed protein | - |
| 10 | Sobic.008G030700 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 11 | Sobic.003G007800 | phosphorylase domain containing protein, putative, expressed | - |
| 12 | Sobic.003G317800 | lysM domain containing protein, putative | - |
| 13 | Sobic.001G255300 | Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed | K01592: tyrosine decarboxylase |
| 14 | Sobic.001G379300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 15 | Sobic.004G328900 | expressed protein | - |
| 16 | Sobic.007G146350 | - | - |
| 17 | Sobic.005G029400 | strictosidine synthase, putative, expressed | - |
| 18 | Sobic.003G287000 | BURP domain containing protein, expressed | - |
| 19 | Sobic.001G363700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed | - |
| 20 | Sobic.008G189500 | similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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