Hb_089491_010

Information

Type -
Description -
Location Contig89491: 12-730
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089491_010 0.0 - - -
2 Hb_009268_110 0.0019104916 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
3 Hb_136856_010 0.0395333015 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
4 Hb_013727_010 0.0505712168 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
5 Hb_021068_020 0.0575047592 - - -
6 Hb_009066_010 0.0783261326 - - -
7 Hb_068347_020 0.0834101022 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
8 Hb_027394_010 0.0834313438 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
9 Hb_005542_020 0.0959336415 - - lupus la ribonucleoprotein, putative [Ricinus communis]
10 Hb_105480_010 0.1194877095 - - -
11 Hb_111332_010 0.1330964551 - - Dihydroneopterin aldolase [Morus notabilis]
12 Hb_076583_010 0.1451341671 - - hypothetical protein JCGZ_17827 [Jatropha curcas]
13 Hb_128173_010 0.1589829396 - - PREDICTED: uncharacterized protein LOC104219073 [Nicotiana sylvestris]
14 Hb_013205_010 0.1601325514 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
15 Hb_007761_010 0.16164516 - - -
16 Hb_064951_010 0.1723708047 - - PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
17 Hb_003636_050 0.188596077 - - PREDICTED: bark storage protein A-like [Populus euphratica]
18 Hb_010399_020 0.1921502978 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
19 Hb_008151_030 0.1960008382 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
20 Hb_034667_010 0.2024091467 - - -

Gene co-expression network

sample Hb_089491_010 Hb_089491_010 Hb_009268_110 Hb_009268_110 Hb_089491_010--Hb_009268_110 Hb_136856_010 Hb_136856_010 Hb_089491_010--Hb_136856_010 Hb_013727_010 Hb_013727_010 Hb_089491_010--Hb_013727_010 Hb_021068_020 Hb_021068_020 Hb_089491_010--Hb_021068_020 Hb_009066_010 Hb_009066_010 Hb_089491_010--Hb_009066_010 Hb_068347_020 Hb_068347_020 Hb_089491_010--Hb_068347_020 Hb_009268_110--Hb_136856_010 Hb_009268_110--Hb_013727_010 Hb_009268_110--Hb_021068_020 Hb_009268_110--Hb_009066_010 Hb_009268_110--Hb_068347_020 Hb_136856_010--Hb_021068_020 Hb_136856_010--Hb_009066_010 Hb_136856_010--Hb_068347_020 Hb_027394_010 Hb_027394_010 Hb_136856_010--Hb_027394_010 Hb_005542_020 Hb_005542_020 Hb_013727_010--Hb_005542_020 Hb_105480_010 Hb_105480_010 Hb_013727_010--Hb_105480_010 Hb_111332_010 Hb_111332_010 Hb_013727_010--Hb_111332_010 Hb_013727_010--Hb_136856_010 Hb_021068_020--Hb_009066_010 Hb_021068_020--Hb_068347_020 Hb_021068_020--Hb_027394_010 Hb_009066_010--Hb_068347_020 Hb_009066_010--Hb_027394_010 Hb_068347_020--Hb_027394_010 Hb_013205_010 Hb_013205_010 Hb_068347_020--Hb_013205_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0370985 0.0993677
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis