Hb_014549_030

Information

Type -
Description -
Location Contig14549: 16687-20645
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_002517677.1
description receptor-kinase, putative [Ricinus communis]
swissprot
ID Q9SHI3
description Receptor-like protein 2 OS=Arabidopsis thaliana GN=RLP2 PE=2 SV=1
trembl
ID B9RVA8
description Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Gene Ontology
ID GO:0005515
description lrr receptor-like serine threonine-protein kinase gso1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014549_030 0.0 - - receptor-kinase, putative [Ricinus communis]
2 Hb_000042_410 0.0005199182 - - Patatin precursor, putative [Ricinus communis]
3 Hb_004994_270 0.0008313021 - - PREDICTED: tRNA-specific adenosine deaminase 1 isoform X2 [Jatropha curcas]
4 Hb_171420_010 0.0014273241 - - hypothetical protein AMTR_s00126p00056890 [Amborella trichopoda]
5 Hb_002081_110 0.0039652972 - - PREDICTED: uncharacterized protein LOC105129793 isoform X1 [Populus euphratica]
6 Hb_001031_130 0.0040565177 - - zinc finger protein, putative [Ricinus communis]
7 Hb_000185_190 0.0080374509 - - hypothetical protein L484_017526 [Morus notabilis]
8 Hb_015754_010 0.0095693237 - - Galactose oxidase precursor, putative [Ricinus communis]
9 Hb_002986_150 0.0101916926 - - hypothetical protein glysoja_022060 [Glycine soja]
10 Hb_001579_080 0.0115923887 - - serine/threonine protein kinase, putative [Ricinus communis]
11 Hb_001728_090 0.0125792182 transcription factor TF Family: MYB MYB family protein [Jatropha curcas]
12 Hb_000771_010 0.0155251078 - - ubiquitin-protein ligase, putative [Ricinus communis]
13 Hb_166937_010 0.0196727266 - - PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Jatropha curcas]
14 Hb_003549_110 0.0205177681 - - PREDICTED: uncharacterized protein LOC105647409 [Jatropha curcas]
15 Hb_004712_120 0.0207098715 - - Pectinesterase U1 precursor, putative [Ricinus communis]
16 Hb_013607_020 0.0212737955 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
17 Hb_001504_200 0.0230398162 - - Beta-3 adrenergic receptor, putative [Theobroma cacao]
18 Hb_064476_010 0.0252717202 - - PREDICTED: beta-Amyrin Synthase 1-like [Sesamum indicum]
19 Hb_187418_010 0.0276964612 - - PREDICTED: TMV resistance protein N-like, partial [Citrus sinensis]
20 Hb_000243_270 0.0292931391 - - Pectinesterase-2 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_014549_030 Hb_014549_030 Hb_000042_410 Hb_000042_410 Hb_014549_030--Hb_000042_410 Hb_004994_270 Hb_004994_270 Hb_014549_030--Hb_004994_270 Hb_171420_010 Hb_171420_010 Hb_014549_030--Hb_171420_010 Hb_002081_110 Hb_002081_110 Hb_014549_030--Hb_002081_110 Hb_001031_130 Hb_001031_130 Hb_014549_030--Hb_001031_130 Hb_000185_190 Hb_000185_190 Hb_014549_030--Hb_000185_190 Hb_000042_410--Hb_171420_010 Hb_000042_410--Hb_004994_270 Hb_000042_410--Hb_002081_110 Hb_000042_410--Hb_001031_130 Hb_000042_410--Hb_000185_190 Hb_004994_270--Hb_171420_010 Hb_004994_270--Hb_002081_110 Hb_004994_270--Hb_001031_130 Hb_004994_270--Hb_000185_190 Hb_171420_010--Hb_002081_110 Hb_171420_010--Hb_001031_130 Hb_171420_010--Hb_000185_190 Hb_002081_110--Hb_001031_130 Hb_002081_110--Hb_000185_190 Hb_001031_130--Hb_000185_190 Hb_015754_010 Hb_015754_010 Hb_000185_190--Hb_015754_010 Hb_001579_080 Hb_001579_080 Hb_000185_190--Hb_001579_080 Hb_000771_010 Hb_000771_010 Hb_000185_190--Hb_000771_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0234773 0.0123758 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis