Hb_001031_070

Information

Type -
Description -
Location Contig1031: 92108-93259
Sequence    

Annotation

kegg
ID rcu:RCOM_0610390
description hypothetical protein
nr
ID XP_012089485.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Jatropha curcas]
swissprot
ID Q9LW83
description G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2
trembl
ID B9S7P6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0610390 PE=4 SV=1
Gene Ontology
ID GO:0009505
description g-type lectin s-receptor-like serine threonine-protein kinase ces101

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001031_070 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Jatropha curcas]
2 Hb_000441_240 0.0001918506 - - hypothetical protein ZEAMMB73_005804 [Zea mays]
3 Hb_071079_030 0.0003879436 transcription factor TF Family: MYB-related PREDICTED: transcription factor TRY-like [Populus euphratica]
4 Hb_003687_050 0.0007359614 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002596_100 0.0008741353 - - -
6 Hb_000938_010 0.0016396913 - - polyprotein [Oryza australiensis]
7 Hb_001031_100 0.0019272878 - - -
8 Hb_000724_010 0.0024430273 - - PREDICTED: uncharacterized protein LOC105134348 [Populus euphratica]
9 Hb_080359_020 0.0031471691 - - hypothetical protein JCGZ_04985 [Jatropha curcas]
10 Hb_027556_050 0.0033117453 - - hypothetical protein PHAVU_001G166100g [Phaseolus vulgaris]
11 Hb_000345_090 0.0038128967 - - Cell cycle checkpoint control protein family isoform 5 [Theobroma cacao]
12 Hb_159542_010 0.0041593919 desease resistance Gene Name: NB-ARC PREDICTED: TMV resistance protein N-like [Jatropha curcas]
13 Hb_000696_180 0.0056091384 - - cysteine protease, putative [Ricinus communis]
14 Hb_000705_320 0.0065023977 - - Transcriptional regulator SUPERMAN, putative [Ricinus communis]
15 Hb_011444_050 0.0086110782 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
16 Hb_000329_240 0.0091260158 transcription factor TF Family: PLATZ zinc ion binding protein, putative [Ricinus communis]
17 Hb_073174_010 0.0093634669 - - PREDICTED: MLP-like protein 328 [Jatropha curcas]
18 Hb_005625_030 0.0095572833 - - ribosomal protein S12 (mitochondrion) [Chrysobalanus icaco]
19 Hb_070810_010 0.0097263787 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
20 Hb_163720_010 0.0100945232 - - PREDICTED: uncharacterized protein LOC105636883 [Jatropha curcas]

Gene co-expression network

sample Hb_001031_070 Hb_001031_070 Hb_000441_240 Hb_000441_240 Hb_001031_070--Hb_000441_240 Hb_071079_030 Hb_071079_030 Hb_001031_070--Hb_071079_030 Hb_003687_050 Hb_003687_050 Hb_001031_070--Hb_003687_050 Hb_002596_100 Hb_002596_100 Hb_001031_070--Hb_002596_100 Hb_000938_010 Hb_000938_010 Hb_001031_070--Hb_000938_010 Hb_001031_100 Hb_001031_100 Hb_001031_070--Hb_001031_100 Hb_000441_240--Hb_003687_050 Hb_000441_240--Hb_071079_030 Hb_000441_240--Hb_002596_100 Hb_000441_240--Hb_001031_100 Hb_000441_240--Hb_000938_010 Hb_071079_030--Hb_003687_050 Hb_071079_030--Hb_000938_010 Hb_071079_030--Hb_002596_100 Hb_071079_030--Hb_001031_100 Hb_003687_050--Hb_002596_100 Hb_003687_050--Hb_001031_100 Hb_000724_010 Hb_000724_010 Hb_003687_050--Hb_000724_010 Hb_002596_100--Hb_001031_100 Hb_002596_100--Hb_000724_010 Hb_000938_010--Hb_003687_050 Hb_000938_010--Hb_002596_100 Hb_159542_010 Hb_159542_010 Hb_000938_010--Hb_159542_010 Hb_001031_100--Hb_000724_010 Hb_080359_020 Hb_080359_020 Hb_001031_100--Hb_080359_020 Hb_027556_050 Hb_027556_050 Hb_001031_100--Hb_027556_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0139273 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0134368 0

CAGE analysis