Gene annotation
Transcriptome id Sobic.010G029000.1
Synonym Sb10g002660
Functional annotation expressed protein
UniProt C5Z3R5
Pfam -
Panther DB PTHR10108 PTHR10108:SF837
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40830 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os06g04680.2 : expressed protein
MaizeGDB (Corn) Zm00025a041457 , Zm00025a050094
Brachypodium KQK19931
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G100700 serine/threonine-protein kinase, putative, expressed -
2 Sobic.006G160200 MSP domain containing protein, expressed -
3 Sobic.001G231200 expressed protein -
4 Sobic.001G116600 inactive receptor kinase At2g26730 precursor, putative, expressed -
5 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
6 Sobic.003G013000 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
8 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
9 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
10 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
11 Sobic.008G007000 HIT zinc finger domain containing protein, expressed K11663: ZNHIT1, zinc finger HIT domain-containing protein 1
12 Sobic.009G001200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
13 Sobic.003G406600 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659873)@OsSPL2 - SBP-box gene family member, expressed -
14 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
15 Sobic.007G219200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
16 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
17 Sobic.001G051300 BEE 1, putative, expressed -
18 Sobic.002G370400 expressed protein -
19 Sobic.001G369800 monocopper oxidase, putative, expressed -
20 Sobic.002G347900 GDP-fucose protein-O-fucosyltransferase 2, putative, expressed K03691: peptide-O-fucosyltransferase


Gene co-expression network
sample Sobic010G029000 Sobic010G029000 Sobic003G100700 Sobic003G100700 Sobic010G029000--Sobic003G100700 Sobic006G160200 Sobic006G160200 Sobic010G029000--Sobic006G160200 Sobic001G231200 Sobic001G231200 Sobic010G029000--Sobic001G231200 Sobic001G116600 Sobic001G116600 Sobic010G029000--Sobic001G116600 Sobic004G267600 Sobic004G267600 Sobic010G029000--Sobic004G267600 Sobic003G013000 Sobic003G013000 Sobic010G029000--Sobic003G013000 Sobic001G522300 Sobic001G522300 Sobic010G029000--Sobic001G522300 Sobic001G440900 Sobic001G440900 Sobic010G029000--Sobic001G440900 Sobic001G487200 Sobic001G487200 Sobic010G029000--Sobic001G487200 Sobic001G074000 Sobic001G074000 Sobic003G100700--Sobic001G074000 Sobic003G100700--Sobic004G267600 Sobic009G088700 Sobic009G088700 Sobic003G100700--Sobic009G088700 Sobic002G284100 Sobic002G284100 Sobic003G100700--Sobic002G284100 Sobic001G083500 Sobic001G083500 Sobic003G100700--Sobic001G083500 Sobic002G335900 Sobic002G335900 Sobic003G100700--Sobic002G335900 Sobic001G123100 Sobic001G123100 Sobic003G100700--Sobic001G123100 Sobic004G234500 Sobic004G234500 Sobic003G100700--Sobic004G234500 Sobic004G246500 Sobic004G246500 Sobic003G100700--Sobic004G246500 Sobic006G183600 Sobic006G183600 Sobic006G160200--Sobic006G183600 Sobic006G160200--Sobic002G284100 Sobic006G160200--Sobic004G267600 Sobic005G062600 Sobic005G062600 Sobic006G160200--Sobic005G062600 Sobic006G160200--Sobic001G487200 Sobic009G172950 Sobic009G172950 Sobic006G160200--Sobic009G172950 Sobic001G369800 Sobic001G369800 Sobic006G160200--Sobic001G369800 Sobic001G540700 Sobic001G540700 Sobic006G160200--Sobic001G540700 Sobic006G272800 Sobic006G272800 Sobic006G160200--Sobic006G272800 Sobic008G096200 Sobic008G096200 Sobic001G231200--Sobic008G096200 Sobic001G231200--Sobic001G487200 Sobic002G370400 Sobic002G370400 Sobic001G231200--Sobic002G370400 Sobic010G211800 Sobic010G211800 Sobic001G231200--Sobic010G211800 Sobic010G105400 Sobic010G105400 Sobic001G231200--Sobic010G105400 Sobic010G129700 Sobic010G129700 Sobic001G231200--Sobic010G129700 Sobic001G231200--Sobic003G013000 Sobic003G444100 Sobic003G444100 Sobic001G231200--Sobic003G444100 Sobic002G394500 Sobic002G394500 Sobic001G231200--Sobic002G394500 Sobic004G229200 Sobic004G229200 Sobic001G116600--Sobic004G229200 Sobic002G345800 Sobic002G345800 Sobic001G116600--Sobic002G345800 Sobic001G116600--Sobic002G284100 Sobic001G289900 Sobic001G289900 Sobic001G116600--Sobic001G289900 Sobic001G116600--Sobic006G160200 Sobic002G196500 Sobic002G196500 Sobic001G116600--Sobic002G196500 Sobic006G202100 Sobic006G202100 Sobic001G116600--Sobic006G202100 Sobic001G116600--Sobic004G267600 Sobic001G116600--Sobic001G440900 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic004G267600--Sobic010G129700 Sobic006G142500 Sobic006G142500 Sobic004G267600--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic004G267600--Sobic005G062600 Sobic004G257600 Sobic004G257600 Sobic003G013000--Sobic004G257600 Sobic003G260700 Sobic003G260700 Sobic003G013000--Sobic003G260700 Sobic003G410600 Sobic003G410600 Sobic003G013000--Sobic003G410600 Sobic007G168900 Sobic007G168900 Sobic003G013000--Sobic007G168900 Sobic003G013000--Sobic003G444100 Sobic001G177900 Sobic001G177900 Sobic003G013000--Sobic001G177900 Sobic006G144300 Sobic006G144300 Sobic003G013000--Sobic006G144300 Sobic003G102000 Sobic003G102000 Sobic003G013000--Sobic003G102000 Sobic003G314900 Sobic003G314900 Sobic003G013000--Sobic003G314900 Sobic001G522300--Sobic001G074000 Sobic007G116800 Sobic007G116800 Sobic001G522300--Sobic007G116800 Sobic001G522300--Sobic001G493900 Sobic003G031700 Sobic003G031700 Sobic001G522300--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G522300--Sobic002G362700 Sobic001G286400 Sobic001G286400 Sobic001G522300--Sobic001G286400 Sobic009G235700 Sobic009G235700 Sobic001G522300--Sobic009G235700 Sobic009G129700 Sobic009G129700 Sobic001G522300--Sobic009G129700 Sobic004G283800 Sobic004G283800 Sobic001G522300--Sobic004G283800 Sobic002G351100 Sobic002G351100 Sobic001G440900--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic001G440900--Sobic001G300400 Sobic010G001800 Sobic010G001800 Sobic001G440900--Sobic010G001800 Sobic001G440900--Sobic001G289900 Sobic004G327600 Sobic004G327600 Sobic001G440900--Sobic004G327600 Sobic001G235700 Sobic001G235700 Sobic001G440900--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic001G440900--Sobic001G107300 Sobic002G289800 Sobic002G289800 Sobic001G440900--Sobic002G289800 Sobic007G153700 Sobic007G153700 Sobic001G440900--Sobic007G153700 Sobic004G315700 Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic009G212100 Sobic009G212100 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200
Octagon: transcription factors


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