Gene annotation
Transcriptome id Sobic.009G139500.1
Synonym Sb09g020510
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
-
UniProt C5YXW5
Pfam -
Panther DB PTHR33429 PTHR33429:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57500 : -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G139500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G010300 - -
2 Sobic.005G033600 heavy-metal-associated domain-containing protein, putative, expressed -
3 Sobic.003G076400 ZOS1-07 - C2H2 zinc finger protein, expressed -
4 Sobic.002G058900 OsFBX237 - F-box domain containing protein, expressed -
5 Sobic.002G267700 bZIP family transcription factor, putative, expressed -
6 Sobic.002G101200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
7 Sobic.006G031000 MYB family transcription factor, putative, expressed -
8 Sobic.002G015400 OsFBD13 - F-box and FBD domain containing protein, expressed -
9 Sobic.008G159300 KUN1 - Kunitz-type trypsin inhibitor precursor, expressed -
10 Sobic.005G174200 - -
11 Sobic.006G070830 - K01193: INV, beta-fructofuranosidase
12 Sobic.005G032500 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
13 Sobic.001G374600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@desiccation-related protein PCC13-62 precursor, putative, expressed -
14 Sobic.010G111400 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
15 Sobic.001G495700 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
16 Sobic.002G217000 expressed protein -
17 Sobic.007G037200 expressed protein -
18 Sobic.008G031400 OsSub63 - Putative Subtilisin homologue, expressed -
19 Sobic.007G032500 WD domain, G-beta repeat domain containing protein, expressed K11462: polycomb protein EED
20 Sobic.001G511400 BES1/BZR1 homolog protein, putative, expressed -


Gene co-expression network
sample Sobic009G139500 Sobic009G139500 Sobic010G010300 Sobic010G010300 Sobic009G139500--Sobic010G010300 Sobic005G033600 Sobic005G033600 Sobic009G139500--Sobic005G033600 Sobic003G076400 Sobic003G076400 Sobic009G139500--Sobic003G076400 Sobic002G058900 Sobic002G058900 Sobic009G139500--Sobic002G058900 Sobic002G267700 Sobic002G267700 Sobic009G139500--Sobic002G267700 Sobic002G101200 Sobic002G101200 Sobic009G139500--Sobic002G101200 Sobic006G031000 Sobic006G031000 Sobic009G139500--Sobic006G031000 Sobic002G015400 Sobic002G015400 Sobic009G139500--Sobic002G015400 Sobic008G159300 Sobic008G159300 Sobic009G139500--Sobic008G159300 Sobic010G010300--Sobic006G031000 Sobic010G010300--Sobic009G139500 Sobic006G117300 Sobic006G117300 Sobic010G010300--Sobic006G117300 Sobic010G010300--Sobic002G267700 Sobic005G153500 Sobic005G153500 Sobic010G010300--Sobic005G153500 Sobic005G075000 Sobic005G075000 Sobic010G010300--Sobic005G075000 Sobic010G010300--Sobic002G101200 Sobic007G040000 Sobic007G040000 Sobic010G010300--Sobic007G040000 Sobic010G010300--Sobic005G033600 Sobic005G174200 Sobic005G174200 Sobic005G033600--Sobic005G174200 Sobic005G033600--Sobic002G267700 Sobic007G032500 Sobic007G032500 Sobic005G033600--Sobic007G032500 Sobic005G033600--Sobic009G139500 Sobic003G211600 Sobic003G211600 Sobic005G033600--Sobic003G211600 Sobic006G070830 Sobic006G070830 Sobic005G033600--Sobic006G070830 Sobic001G374600 Sobic001G374600 Sobic005G033600--Sobic001G374600 Sobic005G033600--Sobic002G015400 Sobic003G091500 Sobic003G091500 Sobic005G033600--Sobic003G091500 Sobic010G111400 Sobic010G111400 Sobic003G076400--Sobic010G111400 Sobic003G076400--Sobic009G139500 Sobic001G029700 Sobic001G029700 Sobic003G076400--Sobic001G029700 Sobic005G035500 Sobic005G035500 Sobic003G076400--Sobic005G035500 Sobic010G137600 Sobic010G137600 Sobic003G076400--Sobic010G137600 Sobic003G076400--Sobic002G058900 Sobic001G495700 Sobic001G495700 Sobic003G076400--Sobic001G495700 Sobic007G025100 Sobic007G025100 Sobic003G076400--Sobic007G025100 Sobic002G059500 Sobic002G059500 Sobic003G076400--Sobic002G059500 Sobic002G058900--Sobic008G159300 Sobic007G037200 Sobic007G037200 Sobic002G058900--Sobic007G037200 Sobic002G217000 Sobic002G217000 Sobic002G058900--Sobic002G217000 Sobic005G032500 Sobic005G032500 Sobic002G058900--Sobic005G032500 Sobic002G058900--Sobic002G015400 Sobic006G004100 Sobic006G004100 Sobic002G058900--Sobic006G004100 Sobic002G058900--Sobic002G101200 Sobic003G266100 Sobic003G266100 Sobic002G058900--Sobic003G266100 Sobic002G058900--Sobic002G059500 Sobic002G267700--Sobic005G033600 Sobic002G267700--Sobic006G070830 Sobic008G031400 Sobic008G031400 Sobic002G267700--Sobic008G031400 Sobic002G267700--Sobic006G031000 Sobic005G174500 Sobic005G174500 Sobic002G267700--Sobic005G174500 Sobic002G089500 Sobic002G089500 Sobic002G267700--Sobic002G089500 Sobic002G267700--Sobic005G032500 Sobic002G267700--Sobic003G091500 Sobic002G267700--Sobic006G117300 Sobic002G101200--Sobic002G217000 Sobic002G101200--Sobic005G032500 Sobic002G101200--Sobic002G058900 Sobic002G101200--Sobic007G037200 Sobic002G166800 Sobic002G166800 Sobic002G101200--Sobic002G166800 Sobic002G100000 Sobic002G100000 Sobic002G101200--Sobic002G100000 Sobic003G225800 Sobic003G225800 Sobic002G101200--Sobic003G225800 Sobic002G101200--Sobic006G031000 Sobic009G051201 Sobic009G051201 Sobic002G101200--Sobic009G051201 Sobic006G031000--Sobic002G166800 Sobic006G031000--Sobic010G010300 Sobic006G031000--Sobic006G117300 Sobic006G031000--Sobic002G101200 Sobic006G031000--Sobic002G267700 Sobic006G031000--Sobic009G139500 Sobic006G031000--Sobic005G032500 Sobic001G392900 Sobic001G392900 Sobic006G031000--Sobic001G392900 Sobic002G053100 Sobic002G053100 Sobic006G031000--Sobic002G053100 Sobic002G015400--Sobic008G159300 Sobic001G511400 Sobic001G511400 Sobic002G015400--Sobic001G511400 Sobic002G015400--Sobic003G266100 Sobic002G172200 Sobic002G172200 Sobic002G015400--Sobic002G172200 Sobic002G172100 Sobic002G172100 Sobic002G015400--Sobic002G172100 Sobic002G015400--Sobic002G058900 Sobic009G058300 Sobic009G058300 Sobic002G015400--Sobic009G058300 Sobic002G015400--Sobic001G495700 Sobic002G015400--Sobic002G059500 Sobic008G159300--Sobic002G015400 Sobic008G159300--Sobic002G058900 Sobic008G159300--Sobic001G511400 Sobic008G159300--Sobic003G266100 Sobic008G159300--Sobic007G037200 Sobic008G159300--Sobic005G032500 Sobic008G159300--Sobic002G172200 Sobic008G159300--Sobic002G172100 Sobic004G220900 Sobic004G220900 Sobic008G159300--Sobic004G220900
Octagon: transcription factors


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