Gene annotation
Transcriptome id Sobic.009G113000.1,Sobic.009G113000.2
Synonym Sb09g018100
Functional annotation chaperone protein dnaJ 49, putative, expressed
UniProt C5YWV6
Pfam PF09320 PF00226
Panther DB PTHR24078 PTHR24078:SF193
NCBI CDD KOG0714; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09518; DnaJ homolog subfamily B member 12
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57340 : Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977)
RAP-DB (Rice) LOC_Os05g30130.1 : chaperone protein dnaJ 49, putative, expressed
MaizeGDB (Corn) Zm00025a036981
Brachypodium KQK06683 , KQK06682 , KQK06685 , KQK06684 , KQK06687 , KQK06686
Barley HORVU1Hr1G058700.1
Wheat -
Populus -


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cDNA sequences
Sobic.009G113000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -
2 Sobic.004G264400 TBC domain containing protein, expressed -
3 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
4 Sobic.007G075400 expressed protein -
5 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
6 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
8 Sobic.004G200200 joka2, putative, expressed K17987: next to BRCA1 gene 1 protein
9 Sobic.001G146800 expressed protein -
10 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
11 Sobic.010G224000 molybdenum cofactor sulfurase, putative, expressed K15631: molybdenum cofactor sulfurtransferase
12 Sobic.002G419800 structural constituent of ribosome, putative, expressed -
13 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
14 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
15 Sobic.006G115600 expressed protein -
16 Sobic.009G191000 MATH domain containing protein, expressed -
17 Sobic.001G207000 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
18 Sobic.003G195000 OsFtsH5 FtsH protease, homologue of AtFtsH4, expressed K08955: ATP-dependent metalloprotease
19 Sobic.001G050200 expressed protein -
20 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic009G113000 Sobic009G113000 Sobic003G118200 Sobic003G118200 Sobic009G113000--Sobic003G118200 Sobic004G264400 Sobic004G264400 Sobic009G113000--Sobic004G264400 Sobic009G053900 Sobic009G053900 Sobic009G113000--Sobic009G053900 Sobic007G075400 Sobic007G075400 Sobic009G113000--Sobic007G075400 Sobic004G347400 Sobic004G347400 Sobic009G113000--Sobic004G347400 Sobic001G121200 Sobic001G121200 Sobic009G113000--Sobic001G121200 Sobic004G331100 Sobic004G331100 Sobic009G113000--Sobic004G331100 Sobic004G200200 Sobic004G200200 Sobic009G113000--Sobic004G200200 Sobic001G146800 Sobic001G146800 Sobic009G113000--Sobic001G146800 Sobic003G118200--Sobic009G053900 Sobic009G191000 Sobic009G191000 Sobic003G118200--Sobic009G191000 Sobic003G118200--Sobic009G113000 Sobic003G422500 Sobic003G422500 Sobic003G118200--Sobic003G422500 Sobic002G008900 Sobic002G008900 Sobic003G118200--Sobic002G008900 Sobic003G118200--Sobic004G347400 Sobic003G118200--Sobic007G075400 Sobic001G451400 Sobic001G451400 Sobic003G118200--Sobic001G451400 Sobic003G313500 Sobic003G313500 Sobic003G118200--Sobic003G313500 Sobic001G109800 Sobic001G109800 Sobic004G264400--Sobic001G109800 Sobic004G264400--Sobic009G113000 Sobic002G132000 Sobic002G132000 Sobic004G264400--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G264400--Sobic007G024700 Sobic004G264400--Sobic004G331100 Sobic006G115600 Sobic006G115600 Sobic004G264400--Sobic006G115600 Sobic001G065000 Sobic001G065000 Sobic004G264400--Sobic001G065000 Sobic004G274200 Sobic004G274200 Sobic004G264400--Sobic004G274200 Sobic004G264400--Sobic007G075400 Sobic009G053900--Sobic009G191000 Sobic009G053900--Sobic003G118200 Sobic009G053900--Sobic002G008900 Sobic009G053900--Sobic003G422500 Sobic001G365900 Sobic001G365900 Sobic009G053900--Sobic001G365900 Sobic001G289600 Sobic001G289600 Sobic009G053900--Sobic001G289600 Sobic010G206900 Sobic010G206900 Sobic009G053900--Sobic010G206900 Sobic009G053900--Sobic007G075400 Sobic001G540400 Sobic001G540400 Sobic009G053900--Sobic001G540400 Sobic010G139600 Sobic010G139600 Sobic007G075400--Sobic010G139600 Sobic007G075400--Sobic009G053900 Sobic007G075400--Sobic004G331100 Sobic007G075400--Sobic002G008900 Sobic007G075400--Sobic009G191000 Sobic002G146300 Sobic002G146300 Sobic007G075400--Sobic002G146300 Sobic007G075400--Sobic003G422500 Sobic007G075400--Sobic003G313500 Sobic004G065000 Sobic004G065000 Sobic007G075400--Sobic004G065000 Sobic004G347400--Sobic003G422500 Sobic001G058700 Sobic001G058700 Sobic004G347400--Sobic001G058700 Sobic004G347400--Sobic003G118200 Sobic001G114000 Sobic001G114000 Sobic004G347400--Sobic001G114000 Sobic007G172400 Sobic007G172400 Sobic004G347400--Sobic007G172400 Sobic004G347400--Sobic004G331100 Sobic004G347400--Sobic009G053900 Sobic004G347400--Sobic001G065000 Sobic001G474600 Sobic001G474600 Sobic004G347400--Sobic001G474600 Sobic001G390800 Sobic001G390800 Sobic001G121200--Sobic001G390800 Sobic010G205800 Sobic010G205800 Sobic001G121200--Sobic010G205800 Sobic001G268200 Sobic001G268200 Sobic001G121200--Sobic001G268200 Sobic001G121200--Sobic009G113000 Sobic002G111000 Sobic002G111000 Sobic001G121200--Sobic002G111000 Sobic010G147100 Sobic010G147100 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic004G331100--Sobic007G075400 Sobic009G027300 Sobic009G027300 Sobic004G331100--Sobic009G027300 Sobic002G419800 Sobic002G419800 Sobic004G331100--Sobic002G419800 Sobic003G101400 Sobic003G101400 Sobic004G331100--Sobic003G101400 Sobic001G290100 Sobic001G290100 Sobic004G331100--Sobic001G290100 Sobic001G050200 Sobic001G050200 Sobic004G331100--Sobic001G050200 Sobic004G331100--Sobic004G347400 Sobic004G331100--Sobic003G118200 Sobic004G331100--Sobic004G065000 Sobic002G045600 Sobic002G045600 Sobic004G200200--Sobic002G045600 Sobic004G200200--Sobic001G146800 Sobic003G139900 Sobic003G139900 Sobic004G200200--Sobic003G139900 Sobic003G408600 Sobic003G408600 Sobic004G200200--Sobic003G408600 Sobic004G200200--Sobic002G008900 Sobic004G200200--Sobic009G191000 Sobic004G200200--Sobic001G058700 Sobic001G289800 Sobic001G289800 Sobic004G200200--Sobic001G289800 Sobic004G200200--Sobic003G422500 Sobic001G146800--Sobic001G058700 Sobic001G146800--Sobic004G200200 Sobic001G498600 Sobic001G498600 Sobic001G146800--Sobic001G498600 Sobic001G146800--Sobic004G347400 Sobic010G112000 Sobic010G112000 Sobic001G146800--Sobic010G112000 Sobic001G178700 Sobic001G178700 Sobic001G146800--Sobic001G178700 Sobic004G113400 Sobic004G113400 Sobic001G146800--Sobic004G113400 Sobic006G131500 Sobic006G131500 Sobic001G146800--Sobic006G131500 Sobic001G146800--Sobic007G172400
Octagon: transcription factors


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