Gene annotation
Transcriptome id Sobic.008G035800.1
Synonym Sb08g003090
Functional annotation glycosyltransferase, putative, expressed
UniProt C5YRR0
Pfam PF05637
Panther DB PTHR31311 PTHR31311:SF8
NCBI CDD KOG4748; Subunit of Golgi mannosyltransferase complex
KEGG Orthology K08238; xyloglucan 6-xylosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G74380 : xyloglucan xylosyltransferase 5
RAP-DB (Rice) LOC_Os12g05380.1 : glycosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a053874 , Zm00025a053875 , Zm00025a053889 , Zm00025a053888
Brachypodium KQJ92275
Barley HORVU4Hr1G054910.1 , HORVU4Hr1G054910.2 , HORVU6Hr1G040960.2 , HORVU6Hr1G040960.1 , HORVU5Hr1G042000.1
Wheat TraesCS4A02G116100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G240400 leaf senescence related protein, putative, expressed -
2 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
3 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
4 Sobic.004G322000 hypro1, putative, expressed -
5 Sobic.009G208700 POEI45 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.010G152400 glycosyltransferase, putative, expressed -
7 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.004G271800 WRKY66, expressed -
9 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
10 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
11 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
12 Sobic.001G232000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
14 Sobic.010G130500 SAM dependent carboxyl methyltransferase, putative, expressed -
15 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
16 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
18 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
19 Sobic.002G343100 protein kinase, putative, expressed -
20 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -


Gene co-expression network
sample Sobic008G035800 Sobic008G035800 Sobic003G240400 Sobic003G240400 Sobic008G035800--Sobic003G240400 Sobic003G282300 Sobic003G282300 Sobic008G035800--Sobic003G282300 Sobic007G090600 Sobic007G090600 Sobic008G035800--Sobic007G090600 Sobic004G322000 Sobic004G322000 Sobic008G035800--Sobic004G322000 Sobic009G208700 Sobic009G208700 Sobic008G035800--Sobic009G208700 Sobic010G152400 Sobic010G152400 Sobic008G035800--Sobic010G152400 Sobic003G140200 Sobic003G140200 Sobic008G035800--Sobic003G140200 Sobic004G271800 Sobic004G271800 Sobic008G035800--Sobic004G271800 Sobic010G082000 Sobic010G082000 Sobic008G035800--Sobic010G082000 Sobic003G240400--Sobic010G082000 Sobic003G215300 Sobic003G215300 Sobic003G240400--Sobic003G215300 Sobic001G263300 Sobic001G263300 Sobic003G240400--Sobic001G263300 Sobic006G196400 Sobic006G196400 Sobic003G240400--Sobic006G196400 Sobic003G240400--Sobic007G090600 Sobic003G240400--Sobic010G152400 Sobic006G028500 Sobic006G028500 Sobic003G240400--Sobic006G028500 Sobic003G000100 Sobic003G000100 Sobic003G240400--Sobic003G000100 Sobic003G240400--Sobic008G035800 Sobic003G282300--Sobic007G090600 Sobic006G085700 Sobic006G085700 Sobic003G282300--Sobic006G085700 Sobic003G282300--Sobic003G140200 Sobic004G106100 Sobic004G106100 Sobic003G282300--Sobic004G106100 Sobic003G282300--Sobic008G035800 Sobic006G205700 Sobic006G205700 Sobic003G282300--Sobic006G205700 Sobic006G031100 Sobic006G031100 Sobic003G282300--Sobic006G031100 Sobic003G095100 Sobic003G095100 Sobic003G282300--Sobic003G095100 Sobic003G282300--Sobic004G322000 Sobic007G090600--Sobic006G031100 Sobic007G090600--Sobic003G282300 Sobic007G090600--Sobic004G322000 Sobic007G090600--Sobic003G215300 Sobic004G014600 Sobic004G014600 Sobic007G090600--Sobic004G014600 Sobic007G090600--Sobic006G196400 Sobic007G090600--Sobic006G205700 Sobic007G090600--Sobic003G240400 Sobic002G115600 Sobic002G115600 Sobic007G090600--Sobic002G115600 Sobic004G322000--Sobic007G090600 Sobic004G322000--Sobic003G215300 Sobic004G322000--Sobic006G031100 Sobic004G322000--Sobic003G140200 Sobic004G322000--Sobic003G282300 Sobic004G322000--Sobic003G240400 Sobic004G322000--Sobic008G035800 Sobic004G322000--Sobic010G082000 Sobic004G322000--Sobic004G014600 Sobic002G343100 Sobic002G343100 Sobic009G208700--Sobic002G343100 Sobic009G208700--Sobic003G282300 Sobic009G208700--Sobic008G035800 Sobic009G208700--Sobic007G090600 Sobic009G208700--Sobic004G322000 Sobic009G181600 Sobic009G181600 Sobic009G208700--Sobic009G181600 Sobic010G130500 Sobic010G130500 Sobic009G208700--Sobic010G130500 Sobic009G208700--Sobic006G085700 Sobic009G208700--Sobic003G240400 Sobic010G152400--Sobic003G000100 Sobic004G322100 Sobic004G322100 Sobic010G152400--Sobic004G322100 Sobic010G152400--Sobic003G240400 Sobic004G306900 Sobic004G306900 Sobic010G152400--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic010G152400--Sobic006G092700 Sobic010G152400--Sobic010G082000 Sobic006G003100 Sobic006G003100 Sobic010G152400--Sobic006G003100 Sobic010G152400--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic010G152400--Sobic006G019700 Sobic003G140200--Sobic003G282300 Sobic003G140200--Sobic004G322000 Sobic003G140200--Sobic007G090600 Sobic003G140200--Sobic006G031100 Sobic003G140200--Sobic006G085700 Sobic003G140200--Sobic008G035800 Sobic008G077900 Sobic008G077900 Sobic003G140200--Sobic008G077900 Sobic003G140200--Sobic001G263300 Sobic003G140200--Sobic003G215300 Sobic004G271800--Sobic003G000100 Sobic004G271800--Sobic003G240400 Sobic004G271800--Sobic010G152400 Sobic004G271800--Sobic004G322100 Sobic004G271800--Sobic006G019700 Sobic004G271800--Sobic006G092700 Sobic004G271800--Sobic003G215300 Sobic004G271800--Sobic008G035800 Sobic004G271800--Sobic004G106100 Sobic010G082000--Sobic006G092700 Sobic010G082000--Sobic003G240400 Sobic006G135300 Sobic006G135300 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic010G082000--Sobic006G028500 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic007G073000 Sobic007G073000 Sobic010G082000--Sobic007G073000 Sobic010G082000--Sobic006G196400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.