Gene annotation
Transcriptome id Sobic.007G167500.2,Sobic.007G167500.1
Synonym Sb07g024040
Functional annotation expressed protein
UniProt A0A1Z5RBF0 , A0A1Z5RB89
Pfam PF01909
Panther DB PTHR12271 PTHR12271:SF38
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016779; nucleotidyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G45750 : Nucleotidyltransferase family protein
RAP-DB (Rice) LOC_Os08g44560.1 : expressed protein
MaizeGDB (Corn) Zm00025a030540
Brachypodium KQJ99389
Barley HORVU4Hr1G000070.48 , HORVU4Hr1G000070.49 , HORVU4Hr1G000070.40 , HORVU4Hr1G000070.41 , HORVU4Hr1G000070.42 , HORVU4Hr1G000070.43 , HORVU4Hr1G000070.44 , HORVU4Hr1G000070.45 , HORVU4Hr1G000070.46 , HORVU4Hr1G000070.1 , HORVU4Hr1G000070.9 , HORVU4Hr1G000070.8 , HORVU4Hr1G000070.7 , HORVU4Hr1G000070.5 , HORVU4Hr1G000070.4 , HORVU4Hr1G000070.3 , HORVU4Hr1G000070.2 , HORVU4Hr1G000070.60 , HORVU4Hr1G000070.59 , HORVU4Hr1G000070.17 , HORVU4Hr1G000070.16 , HORVU4Hr1G000070.15 , HORVU4Hr1G000070.14 , HORVU4Hr1G000070.11 , HORVU4Hr1G000070.10 , HORVU4Hr1G000070.19 , HORVU4Hr1G000070.18 , HORVU4Hr1G000070.38 , HORVU4Hr1G000070.31 , HORVU4Hr1G000070.30 , HORVU4Hr1G000070.33 , HORVU4Hr1G000070.32 , HORVU4Hr1G000070.35 , HORVU4Hr1G000070.34 , HORVU4Hr1G000070.37 , HORVU4Hr1G000070.36 , HORVU4Hr1G000070.53 , HORVU4Hr1G000070.52 , HORVU4Hr1G000070.51 , HORVU4Hr1G000070.50 , HORVU4Hr1G000070.57 , HORVU4Hr1G000070.56 , HORVU4Hr1G000070.55 , HORVU4Hr1G000070.54 , HORVU4Hr1G000070.28 , HORVU4Hr1G000070.29 , HORVU4Hr1G000070.26 , HORVU4Hr1G000070.27 , HORVU4Hr1G000070.22 , HORVU4Hr1G000070.23 , HORVU4Hr1G000070.20
Wheat TraesCS7A02G280800 , TraesCS7B02G180400 , TraesCS7D02G279400 , TraesCS7D02G279400
Populus -


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cDNA sequences
Sobic.007G167500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
2 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
4 Sobic.007G096600 - -
5 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
6 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11
7 Sobic.009G210500 expressed protein -
8 Sobic.003G332800 GTPase-activating protein, putative, expressed -
9 Sobic.003G372700 expressed protein -
10 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
11 Sobic.009G056500 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.002G180666 - -
13 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
14 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.006G048500 - -
16 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25
17 Sobic.001G205200 expressed protein -
18 Sobic.003G108700 RNA recognition motif, putative, expressed -
19 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
20 Sobic.002G053000 expressed protein -


Gene co-expression network
sample Sobic007G167500 Sobic007G167500 Sobic003G119000 Sobic003G119000 Sobic007G167500--Sobic003G119000 Sobic002G006900 Sobic002G006900 Sobic007G167500--Sobic002G006900 Sobic003G397800 Sobic003G397800 Sobic007G167500--Sobic003G397800 Sobic007G096600 Sobic007G096600 Sobic007G167500--Sobic007G096600 Sobic010G101800 Sobic010G101800 Sobic007G167500--Sobic010G101800 Sobic007G065400 Sobic007G065400 Sobic007G167500--Sobic007G065400 Sobic009G210500 Sobic009G210500 Sobic007G167500--Sobic009G210500 Sobic003G332800 Sobic003G332800 Sobic007G167500--Sobic003G332800 Sobic003G372700 Sobic003G372700 Sobic007G167500--Sobic003G372700 Sobic003G119000--Sobic003G372700 Sobic002G071500 Sobic002G071500 Sobic003G119000--Sobic002G071500 Sobic003G280800 Sobic003G280800 Sobic003G119000--Sobic003G280800 Sobic003G119000--Sobic007G065400 Sobic003G119000--Sobic007G167500 Sobic007G126600 Sobic007G126600 Sobic003G119000--Sobic007G126600 Sobic001G511500 Sobic001G511500 Sobic003G119000--Sobic001G511500 Sobic002G309600 Sobic002G309600 Sobic003G119000--Sobic002G309600 Sobic001G241200 Sobic001G241200 Sobic003G119000--Sobic001G241200 Sobic008G047800 Sobic008G047800 Sobic002G006900--Sobic008G047800 Sobic002G006900--Sobic007G065400 Sobic003G200200 Sobic003G200200 Sobic002G006900--Sobic003G200200 Sobic002G006900--Sobic003G372700 Sobic009G040600 Sobic009G040600 Sobic002G006900--Sobic009G040600 Sobic001G155000 Sobic001G155000 Sobic002G006900--Sobic001G155000 Sobic002G006900--Sobic002G309600 Sobic001G214300 Sobic001G214300 Sobic002G006900--Sobic001G214300 Sobic001G512700 Sobic001G512700 Sobic002G006900--Sobic001G512700 Sobic002G297200 Sobic002G297200 Sobic003G397800--Sobic002G297200 Sobic001G409600 Sobic001G409600 Sobic003G397800--Sobic001G409600 Sobic002G353600 Sobic002G353600 Sobic003G397800--Sobic002G353600 Sobic003G397800--Sobic007G167500 Sobic003G445400 Sobic003G445400 Sobic003G397800--Sobic003G445400 Sobic001G206100 Sobic001G206100 Sobic003G397800--Sobic001G206100 Sobic007G185900 Sobic007G185900 Sobic003G397800--Sobic007G185900 Sobic003G397800--Sobic010G101800 Sobic008G054500 Sobic008G054500 Sobic003G397800--Sobic008G054500 Sobic002G243900 Sobic002G243900 Sobic007G096600--Sobic002G243900 Sobic003G268300 Sobic003G268300 Sobic007G096600--Sobic003G268300 Sobic003G176500 Sobic003G176500 Sobic007G096600--Sobic003G176500 Sobic001G274200 Sobic001G274200 Sobic007G096600--Sobic001G274200 Sobic007G096600--Sobic003G200200 Sobic005G144400 Sobic005G144400 Sobic007G096600--Sobic005G144400 Sobic003G148000 Sobic003G148000 Sobic007G096600--Sobic003G148000 Sobic007G096600--Sobic003G332800 Sobic001G420200 Sobic001G420200 Sobic007G096600--Sobic001G420200 Sobic010G101800--Sobic002G297200 Sobic010G101800--Sobic001G155000 Sobic010G101800--Sobic007G167500 Sobic010G028800 Sobic010G028800 Sobic010G101800--Sobic010G028800 Sobic010G101800--Sobic003G397800 Sobic010G101800--Sobic001G409600 Sobic002G310200 Sobic002G310200 Sobic010G101800--Sobic002G310200 Sobic010G053800 Sobic010G053800 Sobic010G101800--Sobic010G053800 Sobic010G101800--Sobic002G309600 Sobic007G065400--Sobic002G006900 Sobic002G191800 Sobic002G191800 Sobic007G065400--Sobic002G191800 Sobic008G009700 Sobic008G009700 Sobic007G065400--Sobic008G009700 Sobic007G065400--Sobic009G040600 Sobic004G145500 Sobic004G145500 Sobic007G065400--Sobic004G145500 Sobic007G065400--Sobic009G210500 Sobic007G065400--Sobic003G119000 Sobic007G065400--Sobic003G372700 Sobic008G028700 Sobic008G028700 Sobic007G065400--Sobic008G028700 Sobic002G320500 Sobic002G320500 Sobic009G210500--Sobic002G320500 Sobic009G210500--Sobic007G065400 Sobic002G157000 Sobic002G157000 Sobic009G210500--Sobic002G157000 Sobic006G032400 Sobic006G032400 Sobic009G210500--Sobic006G032400 Sobic009G210500--Sobic003G268300 Sobic001G407200 Sobic001G407200 Sobic009G210500--Sobic001G407200 Sobic009G210500--Sobic007G167500 Sobic001G090400 Sobic001G090400 Sobic009G210500--Sobic001G090400 Sobic009G210500--Sobic004G145500 Sobic003G332800--Sobic007G096600 Sobic006G216800 Sobic006G216800 Sobic003G332800--Sobic006G216800 Sobic003G332800--Sobic003G148000 Sobic003G332800--Sobic002G006900 Sobic003G332800--Sobic007G167500 Sobic009G209300 Sobic009G209300 Sobic003G332800--Sobic009G209300 Sobic003G332800--Sobic002G243900 Sobic003G332800--Sobic007G065400 Sobic003G332800--Sobic003G176500 Sobic003G372700--Sobic002G006900 Sobic003G372700--Sobic003G119000 Sobic003G372700--Sobic007G065400 Sobic005G112300 Sobic005G112300 Sobic003G372700--Sobic005G112300 Sobic003G372700--Sobic002G191800 Sobic003G372700--Sobic009G040600 Sobic003G372700--Sobic002G309600 Sobic003G372700--Sobic003G280800 Sobic001G474600 Sobic001G474600 Sobic003G372700--Sobic001G474600
Octagon: transcription factors


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