Gene annotation
Transcriptome id Sobic.007G078500.2,Sobic.007G078500.1
Synonym Sb07g006320
Functional annotation serine/threonine-protein kinase HT1, putative, expressed
UniProt C5YIX5 , A0A1Z5R8L8
Pfam PF07714
Panther DB PTHR23257 PTHR23257:SF541
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs KOG3087Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G31170 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os08g12750.1 : serine/threonine-protein kinase HT1, putative, expressed
MaizeGDB (Corn) Zm00025a054908 , Zm00025a029901
Brachypodium KQJ95612
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G078500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
2 Sobic.007G078600 YT521-B, putative, expressed -
3 Sobic.004G121100 expressed protein -
4 Sobic.009G179700 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
5 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
6 Sobic.008G076800 expressed protein -
7 Sobic.001G080700 casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha
8 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
9 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
10 Sobic.002G110700 uncharacterized ACR, YggU family COG1872 containing protein, expressed K09131: uncharacterized protein
11 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
12 Sobic.004G200200 joka2, putative, expressed K17987: next to BRCA1 gene 1 protein
13 Sobic.002G347000 WD domain, G-beta repeat domain containing protein, expressed K14963: WDR5, SWD3, COMPASS component SWD3
14 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
15 Sobic.007G084100 expressed protein -
16 Sobic.006G252300 BSD domain-containing protein, putative, expressed -
17 Sobic.006G200600 expressed protein -
18 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
19 Sobic.001G392300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12820: DHX15, pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
20 Sobic.007G115200 hydrolase, NUDIX family, domain containing protein, expressed -


Gene co-expression network
sample Sobic007G078500 Sobic007G078500 Sobic001G281600 Sobic001G281600 Sobic007G078500--Sobic001G281600 Sobic007G078600 Sobic007G078600 Sobic007G078500--Sobic007G078600 Sobic004G121100 Sobic004G121100 Sobic007G078500--Sobic004G121100 Sobic009G179700 Sobic009G179700 Sobic007G078500--Sobic009G179700 Sobic008G179700 Sobic008G179700 Sobic007G078500--Sobic008G179700 Sobic008G076800 Sobic008G076800 Sobic007G078500--Sobic008G076800 Sobic001G080700 Sobic001G080700 Sobic007G078500--Sobic001G080700 Sobic010G279700 Sobic010G279700 Sobic007G078500--Sobic010G279700 Sobic001G375700 Sobic001G375700 Sobic007G078500--Sobic001G375700 Sobic001G281600--Sobic010G279700 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic003G401100 Sobic003G401100 Sobic001G281600--Sobic003G401100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic001G281600--Sobic008G179700 Sobic008G047800 Sobic008G047800 Sobic007G078600--Sobic008G047800 Sobic003G394300 Sobic003G394300 Sobic007G078600--Sobic003G394300 Sobic003G084700 Sobic003G084700 Sobic007G078600--Sobic003G084700 Sobic006G118700 Sobic006G118700 Sobic007G078600--Sobic006G118700 Sobic007G078600--Sobic006G200600 Sobic007G078600--Sobic009G179700 Sobic007G078600--Sobic007G078500 Sobic002G134200 Sobic002G134200 Sobic007G078600--Sobic002G134200 Sobic002G133400 Sobic002G133400 Sobic007G078600--Sobic002G133400 Sobic009G205200 Sobic009G205200 Sobic004G121100--Sobic009G205200 Sobic004G121100--Sobic006G200600 Sobic006G228500 Sobic006G228500 Sobic004G121100--Sobic006G228500 Sobic004G121100--Sobic001G281600 Sobic009G259400 Sobic009G259400 Sobic004G121100--Sobic009G259400 Sobic004G121100--Sobic007G078500 Sobic004G121100--Sobic001G080700 Sobic002G350300 Sobic002G350300 Sobic004G121100--Sobic002G350300 Sobic010G251000 Sobic010G251000 Sobic004G121100--Sobic010G251000 Sobic009G179700--Sobic002G350300 Sobic001G356600 Sobic001G356600 Sobic009G179700--Sobic001G356600 Sobic009G179700--Sobic007G078600 Sobic010G018700 Sobic010G018700 Sobic009G179700--Sobic010G018700 Sobic009G179700--Sobic008G179700 Sobic009G179700--Sobic007G078500 Sobic003G029100 Sobic003G029100 Sobic009G179700--Sobic003G029100 Sobic007G061000 Sobic007G061000 Sobic009G179700--Sobic007G061000 Sobic001G512700 Sobic001G512700 Sobic009G179700--Sobic001G512700 Sobic008G179700--Sobic002G350300 Sobic003G248200 Sobic003G248200 Sobic008G179700--Sobic003G248200 Sobic008G179700--Sobic001G281600 Sobic008G179700--Sobic001G356600 Sobic008G179700--Sobic009G179700 Sobic008G179700--Sobic004G084300 Sobic008G179700--Sobic003G401100 Sobic002G126500 Sobic002G126500 Sobic008G179700--Sobic002G126500 Sobic008G179700--Sobic001G512700 Sobic008G076800--Sobic007G078500 Sobic002G347000 Sobic002G347000 Sobic008G076800--Sobic002G347000 Sobic010G265300 Sobic010G265300 Sobic008G076800--Sobic010G265300 Sobic001G207000 Sobic001G207000 Sobic008G076800--Sobic001G207000 Sobic003G053800 Sobic003G053800 Sobic008G076800--Sobic003G053800 Sobic001G121200 Sobic001G121200 Sobic008G076800--Sobic001G121200 Sobic008G076800--Sobic010G251000 Sobic001G085100 Sobic001G085100 Sobic008G076800--Sobic001G085100 Sobic008G076800--Sobic001G281600 Sobic001G392300 Sobic001G392300 Sobic001G080700--Sobic001G392300 Sobic009G165800 Sobic009G165800 Sobic001G080700--Sobic009G165800 Sobic001G080700--Sobic010G251000 Sobic004G066200 Sobic004G066200 Sobic001G080700--Sobic004G066200 Sobic003G264200 Sobic003G264200 Sobic001G080700--Sobic003G264200 Sobic009G222500 Sobic009G222500 Sobic001G080700--Sobic009G222500 Sobic006G101700 Sobic006G101700 Sobic001G080700--Sobic006G101700 Sobic001G332500 Sobic001G332500 Sobic001G080700--Sobic001G332500 Sobic001G007000 Sobic001G007000 Sobic001G080700--Sobic001G007000 Sobic010G279700--Sobic001G281600 Sobic008G083000 Sobic008G083000 Sobic010G279700--Sobic008G083000 Sobic010G279700--Sobic003G401100 Sobic001G094900 Sobic001G094900 Sobic010G279700--Sobic001G094900 Sobic007G191700 Sobic007G191700 Sobic010G279700--Sobic007G191700 Sobic005G106500 Sobic005G106500 Sobic010G279700--Sobic005G106500 Sobic008G092300 Sobic008G092300 Sobic010G279700--Sobic008G092300 Sobic007G203200 Sobic007G203200 Sobic010G279700--Sobic007G203200 Sobic004G021200 Sobic004G021200 Sobic010G279700--Sobic004G021200 Sobic001G375700--Sobic004G084300 Sobic001G375700--Sobic002G126500 Sobic001G375700--Sobic001G281600 Sobic003G197800 Sobic003G197800 Sobic001G375700--Sobic003G197800 Sobic001G107500 Sobic001G107500 Sobic001G375700--Sobic001G107500 Sobic007G136800 Sobic007G136800 Sobic001G375700--Sobic007G136800 Sobic007G054400 Sobic007G054400 Sobic001G375700--Sobic007G054400 Sobic008G113100 Sobic008G113100 Sobic001G375700--Sobic008G113100 Sobic001G227200 Sobic001G227200 Sobic001G375700--Sobic001G227200
Octagon: transcription factors


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