Gene annotation
Transcriptome id Sobic.006G146500.1,Sobic.006G146500.2
Synonym Sb06g022540, RPS2
Functional annotation NB-ARC/LRR disease resistance protein, putative, expressed
UniProt A0A1Z5RDZ1 , C5YC26
Pfam PF13191 PF13855
Panther DB PTHR23155 PTHR23155:SF482
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13459; disease resistance protein RPS2
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G26090 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os04g43440.1 : NB-ARC/LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a056503 , Zm00025a056501 , Zm00025a010689
Brachypodium KQJ83570 , KQJ83569
Barley HORVU2Hr1G089020.20 , HORVU2Hr1G089020.19 , HORVU2Hr1G089020.18 , HORVU2Hr1G089020.11 , HORVU2Hr1G089020.10 , HORVU2Hr1G089020.13 , HORVU2Hr1G089020.15 , HORVU2Hr1G089020.14 , HORVU2Hr1G089020.17 , HORVU2Hr1G089020.16 , HORVU2Hr1G089020.9 , HORVU2Hr1G089020.8 , HORVU2Hr1G089020.5 , HORVU2Hr1G089020.4 , HORVU2Hr1G089020.7 , HORVU2Hr1G089020.6 , HORVU2Hr1G089020.1 , HORVU2Hr1G089020.3 , HORVU2Hr1G089020.2 , HORVU2Hr1G089020.12
Wheat TraesCS2A02G384100 , TraesCS2D02G380800 , TraesCS2D02G380500 , TraesCS2B02G401300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G425200 Calmodulin-like protein 1(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
2 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
3 Sobic.007G145700 expressed protein -
4 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
5 Sobic.002G207300 tetraspanin family protein, putative, expressed -
6 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
7 Sobic.007G201100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxysterol-binding protein, putative, expressed -
8 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
9 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
10 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.001G314700 uncharacterized Cys-rich domain containing protein, putative, expressed -
13 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
14 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
17 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
18 Sobic.001G370600 expressed protein -
19 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
20 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase


Gene co-expression network
sample Sobic006G146500 Sobic006G146500 Sobic003G425200 Sobic003G425200 Sobic006G146500--Sobic003G425200 Sobic004G065900 Sobic004G065900 Sobic006G146500--Sobic004G065900 Sobic007G145700 Sobic007G145700 Sobic006G146500--Sobic007G145700 Sobic003G341100 Sobic003G341100 Sobic006G146500--Sobic003G341100 Sobic002G207300 Sobic002G207300 Sobic006G146500--Sobic002G207300 Sobic002G294600 Sobic002G294600 Sobic006G146500--Sobic002G294600 Sobic007G201100 Sobic007G201100 Sobic006G146500--Sobic007G201100 Sobic002G367900 Sobic002G367900 Sobic006G146500--Sobic002G367900 Sobic001G081600 Sobic001G081600 Sobic006G146500--Sobic001G081600 Sobic003G425200--Sobic006G146500 Sobic003G425200--Sobic003G341100 Sobic003G425200--Sobic007G201100 Sobic003G425200--Sobic002G207300 Sobic007G011000 Sobic007G011000 Sobic003G425200--Sobic007G011000 Sobic003G425200--Sobic004G065900 Sobic001G370600 Sobic001G370600 Sobic003G425200--Sobic001G370600 Sobic003G425200--Sobic007G145700 Sobic002G118600 Sobic002G118600 Sobic003G425200--Sobic002G118600 Sobic004G065900--Sobic002G207300 Sobic001G095700 Sobic001G095700 Sobic004G065900--Sobic001G095700 Sobic004G065900--Sobic002G367900 Sobic001G118900 Sobic001G118900 Sobic004G065900--Sobic001G118900 Sobic004G065900--Sobic002G294600 Sobic004G065900--Sobic006G146500 Sobic004G065900--Sobic007G201100 Sobic004G065900--Sobic007G145700 Sobic009G010400 Sobic009G010400 Sobic004G065900--Sobic009G010400 Sobic007G145700--Sobic003G341100 Sobic007G145700--Sobic002G294600 Sobic010G102000 Sobic010G102000 Sobic007G145700--Sobic010G102000 Sobic001G462800 Sobic001G462800 Sobic007G145700--Sobic001G462800 Sobic007G145700--Sobic006G146500 Sobic009G217500 Sobic009G217500 Sobic007G145700--Sobic009G217500 Sobic007G145700--Sobic001G095700 Sobic009G044400 Sobic009G044400 Sobic007G145700--Sobic009G044400 Sobic006G273800 Sobic006G273800 Sobic007G145700--Sobic006G273800 Sobic003G341100--Sobic009G217500 Sobic003G341100--Sobic007G145700 Sobic003G341100--Sobic009G044400 Sobic007G077100 Sobic007G077100 Sobic003G341100--Sobic007G077100 Sobic003G341100--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G341100--Sobic001G341600 Sobic003G341100--Sobic006G273800 Sobic010G023200 Sobic010G023200 Sobic003G341100--Sobic010G023200 Sobic003G341100--Sobic002G118600 Sobic002G207300--Sobic004G065900 Sobic002G207300--Sobic002G367900 Sobic002G207300--Sobic007G201100 Sobic002G207300--Sobic006G146500 Sobic002G207300--Sobic001G118900 Sobic002G207300--Sobic003G425200 Sobic002G207300--Sobic002G294600 Sobic001G410100 Sobic001G410100 Sobic002G207300--Sobic001G410100 Sobic002G207300--Sobic001G095700 Sobic002G294600--Sobic007G145700 Sobic002G294600--Sobic001G462800 Sobic002G294600--Sobic001G095700 Sobic002G294600--Sobic002G367900 Sobic002G294600--Sobic004G065900 Sobic002G217100 Sobic002G217100 Sobic002G294600--Sobic002G217100 Sobic002G294600--Sobic003G341100 Sobic002G294600--Sobic006G146500 Sobic002G294600--Sobic001G118900 Sobic007G201100--Sobic002G207300 Sobic007G201100--Sobic004G065900 Sobic007G201100--Sobic003G425200 Sobic007G201100--Sobic003G341100 Sobic007G201100--Sobic007G077100 Sobic007G201100--Sobic009G217500 Sobic007G201100--Sobic006G146500 Sobic007G201100--Sobic002G367900 Sobic007G201100--Sobic007G145700 Sobic002G367900--Sobic002G207300 Sobic002G367900--Sobic004G065900 Sobic003G268900 Sobic003G268900 Sobic002G367900--Sobic003G268900 Sobic002G367900--Sobic001G095700 Sobic002G367900--Sobic001G462800 Sobic002G367900--Sobic002G294600 Sobic002G197600 Sobic002G197600 Sobic002G367900--Sobic002G197600 Sobic006G210300 Sobic006G210300 Sobic002G367900--Sobic006G210300 Sobic004G244100 Sobic004G244100 Sobic002G367900--Sobic004G244100 Sobic001G081600--Sobic001G462800 Sobic001G081600--Sobic002G217100 Sobic001G081600--Sobic006G210300 Sobic004G283300 Sobic004G283300 Sobic001G081600--Sobic004G283300 Sobic001G081600--Sobic002G197600 Sobic004G281200 Sobic004G281200 Sobic001G081600--Sobic004G281200 Sobic002G344700 Sobic002G344700 Sobic001G081600--Sobic002G344700 Sobic004G025000 Sobic004G025000 Sobic001G081600--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic001G081600--Sobic001G476400
Octagon: transcription factors


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