Gene annotation
Transcriptome id Sobic.009G217500.1
Synonym Sb09g027260, MAPKKK17
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1B6P9V8
Pfam PF14531
Panther DB PTHR24361 PTHR24361:SF420
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55090 : mitogen-activated protein kinase kinase kinase 15
RAP-DB (Rice) LOC_Os05g46750.1 : STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a023549 , Zm00025a027899 , Zm00025a027900 , Zm00025a038903 , Zm00025a038904 , Zm00025a044432
Brachypodium PNT72663 , PNT72660 , PNT67117 , KQK05073 , KQK05075 , KQK05074
Barley HORVU1Hr1G078790.1 , HORVU1Hr1G078860.6 , HORVU1Hr1G078860.4 , HORVU1Hr1G078860.5 , HORVU1Hr1G078860.2 , HORVU1Hr1G078860.3 , HORVU1Hr1G078720.5 , HORVU1Hr1G078720.4 , HORVU1Hr1G078720.1 , HORVU1Hr1G078720.3 , HORVU1Hr1G078720.2 , HORVU0Hr1G030380.1 , HORVU0Hr1G030360.4 , HORVU0Hr1G030360.1 , HORVU0Hr1G030360.2 , HORVU0Hr1G030360.3
Wheat TraesCS1D02G372800 , TraesCS3B02G288300 , TraesCS1A02G117800
Populus -


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cDNA sequences
Sobic.009G217500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
2 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
4 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
6 Sobic.003G416500 SRC2 protein, putative, expressed -
7 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
9 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
10 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
11 Sobic.001G192800 AAA-type ATPase family protein, putative, expressed -
12 Sobic.010G209100 WRKY28, expressed -
13 Sobic.010G071000 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.007G145700 expressed protein -
15 Sobic.001G489500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G044400 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
17 Sobic.007G077200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
19 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
20 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -


Gene co-expression network
sample Sobic009G217500 Sobic009G217500 Sobic006G273800 Sobic006G273800 Sobic009G217500--Sobic006G273800 Sobic007G077100 Sobic007G077100 Sobic009G217500--Sobic007G077100 Sobic003G341100 Sobic003G341100 Sobic009G217500--Sobic003G341100 Sobic010G023200 Sobic010G023200 Sobic009G217500--Sobic010G023200 Sobic010G102000 Sobic010G102000 Sobic009G217500--Sobic010G102000 Sobic003G416500 Sobic003G416500 Sobic009G217500--Sobic003G416500 Sobic001G341600 Sobic001G341600 Sobic009G217500--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic009G217500--Sobic001G035000 Sobic001G064900 Sobic001G064900 Sobic009G217500--Sobic001G064900 Sobic006G273800--Sobic009G217500 Sobic006G273800--Sobic010G023200 Sobic006G273800--Sobic007G077100 Sobic006G273800--Sobic003G341100 Sobic001G370600 Sobic001G370600 Sobic006G273800--Sobic001G370600 Sobic006G273800--Sobic003G416500 Sobic006G273800--Sobic001G064900 Sobic006G273800--Sobic001G035000 Sobic010G234000 Sobic010G234000 Sobic006G273800--Sobic010G234000 Sobic007G077100--Sobic010G023200 Sobic007G077100--Sobic009G217500 Sobic007G077100--Sobic006G273800 Sobic007G077100--Sobic003G416500 Sobic007G077100--Sobic003G341100 Sobic006G259000 Sobic006G259000 Sobic007G077100--Sobic006G259000 Sobic007G077200 Sobic007G077200 Sobic007G077100--Sobic007G077200 Sobic010G071000 Sobic010G071000 Sobic007G077100--Sobic010G071000 Sobic001G489500 Sobic001G489500 Sobic007G077100--Sobic001G489500 Sobic003G341100--Sobic009G217500 Sobic007G145700 Sobic007G145700 Sobic003G341100--Sobic007G145700 Sobic009G044400 Sobic009G044400 Sobic003G341100--Sobic009G044400 Sobic003G341100--Sobic007G077100 Sobic003G341100--Sobic010G102000 Sobic003G341100--Sobic001G341600 Sobic003G341100--Sobic006G273800 Sobic003G341100--Sobic010G023200 Sobic002G118600 Sobic002G118600 Sobic003G341100--Sobic002G118600 Sobic010G023200--Sobic007G077100 Sobic010G023200--Sobic009G217500 Sobic010G023200--Sobic003G416500 Sobic010G023200--Sobic006G273800 Sobic010G023200--Sobic006G259000 Sobic010G023200--Sobic010G071000 Sobic010G023200--Sobic003G341100 Sobic010G023200--Sobic001G064900 Sobic010G023200--Sobic001G489500 Sobic010G102000--Sobic009G217500 Sobic010G105300 Sobic010G105300 Sobic010G102000--Sobic010G105300 Sobic010G102000--Sobic003G341100 Sobic002G232800 Sobic002G232800 Sobic010G102000--Sobic002G232800 Sobic010G102000--Sobic001G064900 Sobic010G102000--Sobic007G145700 Sobic010G102000--Sobic010G023200 Sobic010G102000--Sobic007G077100 Sobic010G102000--Sobic006G273800 Sobic003G416500--Sobic001G489500 Sobic003G416500--Sobic010G023200 Sobic003G416500--Sobic006G259000 Sobic003G416500--Sobic007G077100 Sobic003G416500--Sobic009G217500 Sobic003G416500--Sobic006G273800 Sobic009G120800 Sobic009G120800 Sobic003G416500--Sobic009G120800 Sobic002G323900 Sobic002G323900 Sobic003G416500--Sobic002G323900 Sobic003G416500--Sobic010G105300 Sobic009G217600 Sobic009G217600 Sobic001G341600--Sobic009G217600 Sobic001G441100 Sobic001G441100 Sobic001G341600--Sobic001G441100 Sobic001G341600--Sobic001G035000 Sobic001G077400 Sobic001G077400 Sobic001G341600--Sobic001G077400 Sobic004G280900 Sobic004G280900 Sobic001G341600--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic001G341600--Sobic002G140300 Sobic003G353800 Sobic003G353800 Sobic001G341600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic001G341600--Sobic002G278500 Sobic001G538866 Sobic001G538866 Sobic001G341600--Sobic001G538866 Sobic001G035000--Sobic001G441100 Sobic001G035000--Sobic001G077400 Sobic001G035000--Sobic009G217600 Sobic005G037000 Sobic005G037000 Sobic001G035000--Sobic005G037000 Sobic001G035000--Sobic001G341600 Sobic001G209800 Sobic001G209800 Sobic001G035000--Sobic001G209800 Sobic007G122500 Sobic007G122500 Sobic001G035000--Sobic007G122500 Sobic007G126300 Sobic007G126300 Sobic001G035000--Sobic007G126300 Sobic001G035000--Sobic004G280900 Sobic001G064900--Sobic010G102000 Sobic001G064900--Sobic009G217500 Sobic001G064900--Sobic006G273800 Sobic001G064900--Sobic010G023200 Sobic006G257700 Sobic006G257700 Sobic001G064900--Sobic006G257700 Sobic001G064900--Sobic006G259000 Sobic001G064900--Sobic007G077100 Sobic001G095700 Sobic001G095700 Sobic001G064900--Sobic001G095700 Sobic001G064900--Sobic003G341100
Octagon: transcription factors


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