Gene annotation
Transcriptome id Sobic.006G130300.1,Sobic.006G130300.2
Synonym PGLP1, ATPGLP1, PGLP1, Sb06g021010
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
- (PubMedID : 26976818)
4-nitrophenylphosphatase, putative, expressed
UniProt C5YBC8 , A0A1Z5RE35
Pfam PF13344 PF13242
Panther DB PTHR19288 PTHR19288:SF33
NCBI CDD KOG2882; p-Nitrophenyl phosphatase
KEGG Orthology K19269; PGP, phosphoglycolate phosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G36700 : 2-phosphoglycolate phosphatase 1
RAP-DB (Rice) LOC_Os04g41340.1 : 4-nitrophenylphosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a056362
Brachypodium KQJ83303 , KQJ83304
Barley HORVU2Hr1G084750.7 , HORVU2Hr1G084750.8 , HORVU2Hr1G084750.9 , HORVU2Hr1G084750.4 , HORVU2Hr1G084750.5 , HORVU2Hr1G084750.6 , HORVU2Hr1G084750.1 , HORVU2Hr1G084750.2 , HORVU2Hr1G084750.3 , HORVU2Hr1G084750.11 , HORVU2Hr1G084750.10
Wheat TraesCS2A02G348500 , TraesCS2B02G366900 , TraesCS2B02G366900 , TraesCS2D02G346900 , TraesCS2D02G346900
Populus -


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cDNA sequences
Sobic.006G130300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G100000 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
2 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
4 Sobic.001G020100 expressed protein -
5 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
6 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
7 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
8 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
9 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
10 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
11 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
12 Sobic.010G201700 GA16396-PA, putative, expressed -
13 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
14 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
15 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
16 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
17 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
18 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
19 Sobic.006G221000 starch synthase 3(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@soluble starch synthase 3, chloroplast precursor, putative, expressed -
20 Sobic.001G289500 kinase, pfkB family, putative, expressed -


Gene co-expression network
sample Sobic006G130300 Sobic006G130300 Sobic001G100000 Sobic001G100000 Sobic006G130300--Sobic001G100000 Sobic006G238200 Sobic006G238200 Sobic006G130300--Sobic006G238200 Sobic007G140800 Sobic007G140800 Sobic006G130300--Sobic007G140800 Sobic001G020100 Sobic001G020100 Sobic006G130300--Sobic001G020100 Sobic001G329400 Sobic001G329400 Sobic006G130300--Sobic001G329400 Sobic001G491000 Sobic001G491000 Sobic006G130300--Sobic001G491000 Sobic004G283100 Sobic004G283100 Sobic006G130300--Sobic004G283100 Sobic008G115900 Sobic008G115900 Sobic006G130300--Sobic008G115900 Sobic006G207800 Sobic006G207800 Sobic006G130300--Sobic006G207800 Sobic001G100000--Sobic001G491000 Sobic001G100000--Sobic006G238200 Sobic009G237100 Sobic009G237100 Sobic001G100000--Sobic009G237100 Sobic002G275300 Sobic002G275300 Sobic001G100000--Sobic002G275300 Sobic001G100000--Sobic006G207800 Sobic010G201700 Sobic010G201700 Sobic001G100000--Sobic010G201700 Sobic010G181300 Sobic010G181300 Sobic001G100000--Sobic010G181300 Sobic001G289500 Sobic001G289500 Sobic001G100000--Sobic001G289500 Sobic004G272100 Sobic004G272100 Sobic001G100000--Sobic004G272100 Sobic006G238200--Sobic001G491000 Sobic006G238200--Sobic002G275300 Sobic006G238200--Sobic010G181300 Sobic006G238200--Sobic001G100000 Sobic006G238200--Sobic009G237100 Sobic003G398800 Sobic003G398800 Sobic006G238200--Sobic003G398800 Sobic006G238200--Sobic001G289500 Sobic002G370600 Sobic002G370600 Sobic006G238200--Sobic002G370600 Sobic007G225500 Sobic007G225500 Sobic006G238200--Sobic007G225500 Sobic006G077400 Sobic006G077400 Sobic007G140800--Sobic006G077400 Sobic003G303700 Sobic003G303700 Sobic007G140800--Sobic003G303700 Sobic007G140800--Sobic010G201700 Sobic003G024300 Sobic003G024300 Sobic007G140800--Sobic003G024300 Sobic010G153900 Sobic010G153900 Sobic007G140800--Sobic010G153900 Sobic007G140800--Sobic001G329400 Sobic007G009200 Sobic007G009200 Sobic007G140800--Sobic007G009200 Sobic004G125700 Sobic004G125700 Sobic007G140800--Sobic004G125700 Sobic007G140800--Sobic009G237100 Sobic001G020100--Sobic001G491000 Sobic003G370000 Sobic003G370000 Sobic001G020100--Sobic003G370000 Sobic001G020100--Sobic001G289500 Sobic007G161500 Sobic007G161500 Sobic001G020100--Sobic007G161500 Sobic001G020100--Sobic006G130300 Sobic005G056400 Sobic005G056400 Sobic001G020100--Sobic005G056400 Sobic001G076900 Sobic001G076900 Sobic001G020100--Sobic001G076900 Sobic001G020100--Sobic006G238200 Sobic001G020100--Sobic001G100000 Sobic001G329400--Sobic003G024300 Sobic001G329400--Sobic007G161500 Sobic006G244000 Sobic006G244000 Sobic001G329400--Sobic006G244000 Sobic003G127800 Sobic003G127800 Sobic001G329400--Sobic003G127800 Sobic009G129300 Sobic009G129300 Sobic001G329400--Sobic009G129300 Sobic001G329400--Sobic007G140800 Sobic001G329400--Sobic004G283100 Sobic001G329400--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic001G329400--Sobic009G104800 Sobic001G491000--Sobic006G238200 Sobic001G491000--Sobic010G181300 Sobic001G491000--Sobic001G100000 Sobic001G491000--Sobic002G275300 Sobic001G491000--Sobic001G289500 Sobic001G491000--Sobic009G129300 Sobic001G491000--Sobic002G370600 Sobic001G491000--Sobic009G237100 Sobic004G305800 Sobic004G305800 Sobic001G491000--Sobic004G305800 Sobic004G283100--Sobic004G272100 Sobic008G053200 Sobic008G053200 Sobic004G283100--Sobic008G053200 Sobic004G283100--Sobic004G305800 Sobic004G238600 Sobic004G238600 Sobic004G283100--Sobic004G238600 Sobic004G283100--Sobic010G201700 Sobic004G283100--Sobic001G329400 Sobic004G283100--Sobic002G370600 Sobic009G043000 Sobic009G043000 Sobic004G283100--Sobic009G043000 Sobic004G283100--Sobic009G129300 Sobic007G136200 Sobic007G136200 Sobic008G115900--Sobic007G136200 Sobic006G158100 Sobic006G158100 Sobic008G115900--Sobic006G158100 Sobic008G115900--Sobic006G130300 Sobic008G115900--Sobic006G207800 Sobic004G356400 Sobic004G356400 Sobic008G115900--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic008G115900--Sobic001G017300 Sobic008G115900--Sobic010G153900 Sobic003G229300 Sobic003G229300 Sobic008G115900--Sobic003G229300 Sobic008G115900--Sobic001G491000 Sobic001G102800 Sobic001G102800 Sobic006G207800--Sobic001G102800 Sobic006G207800--Sobic009G237100 Sobic006G207800--Sobic007G009200 Sobic003G387100 Sobic003G387100 Sobic006G207800--Sobic003G387100 Sobic006G207800--Sobic009G043000 Sobic010G035400 Sobic010G035400 Sobic006G207800--Sobic010G035400 Sobic003G431700 Sobic003G431700 Sobic006G207800--Sobic003G431700 Sobic006G207800--Sobic010G201700 Sobic006G207800--Sobic006G238200
Octagon: transcription factors


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