Gene annotation
Transcriptome id Sobic.007G161500.1
Synonym Sb07g023470, PGR5
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
PGR5, putative, expressed
UniProt C5YMP9
Pfam -
Panther DB PTHR35709 PTHR35709:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G05620 : proton gradient regulation 5
RAP-DB (Rice) LOC_Os08g45190.1 : PGR5, putative, expressed
MaizeGDB (Corn) Zm00025a005491 , Zm00025a030485
Brachypodium -
Barley HORVU7Hr1G064100.2 , HORVU7Hr1G064100.3 , HORVU7Hr1G064100.1
Wheat TraesCS7B02G179200 , TraesCS7A02G282100
Populus -


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cDNA sequences
Sobic.007G161500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G056400 Fructose-bisphosphate aldolase(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Fructose-bisphosphate aldolase, putative (Os)"(PubMedID : 27208977)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
2 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.010G188300 fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
4 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
5 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
6 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
7 Sobic.001G289500 kinase, pfkB family, putative, expressed -
8 Sobic.004G305800 expressed protein -
9 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
10 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
11 Sobic.002G314300 OsAPRL1 adenosine 5\'-phosphosulfate reductase-like OsAPRL1, expressed K05907: adenylyl-sulfate reductase (glutathione)
12 Sobic.010G039500 genetic modifier, putative, expressed -
13 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
14 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
15 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
16 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.001G020100 expressed protein -
18 Sobic.001G100000 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
19 Sobic.006G057866 - K12129: pseudo-response regulator 7
20 Sobic.002G370600 - -


Gene co-expression network
sample Sobic007G161500 Sobic007G161500 Sobic005G056400 Sobic005G056400 Sobic007G161500--Sobic005G056400 Sobic003G127800 Sobic003G127800 Sobic007G161500--Sobic003G127800 Sobic010G188300 Sobic010G188300 Sobic007G161500--Sobic010G188300 Sobic001G329400 Sobic001G329400 Sobic007G161500--Sobic001G329400 Sobic003G370000 Sobic003G370000 Sobic007G161500--Sobic003G370000 Sobic001G491000 Sobic001G491000 Sobic007G161500--Sobic001G491000 Sobic001G289500 Sobic001G289500 Sobic007G161500--Sobic001G289500 Sobic004G305800 Sobic004G305800 Sobic007G161500--Sobic004G305800 Sobic003G024300 Sobic003G024300 Sobic007G161500--Sobic003G024300 Sobic005G056400--Sobic007G161500 Sobic005G056400--Sobic004G305800 Sobic005G056400--Sobic003G127800 Sobic005G056400--Sobic003G370000 Sobic005G056400--Sobic010G188300 Sobic001G076900 Sobic001G076900 Sobic005G056400--Sobic001G076900 Sobic005G056400--Sobic001G491000 Sobic005G056400--Sobic001G329400 Sobic006G057866 Sobic006G057866 Sobic005G056400--Sobic006G057866 Sobic003G127800--Sobic007G161500 Sobic004G059800 Sobic004G059800 Sobic003G127800--Sobic004G059800 Sobic010G039500 Sobic010G039500 Sobic003G127800--Sobic010G039500 Sobic003G127800--Sobic001G491000 Sobic009G129300 Sobic009G129300 Sobic003G127800--Sobic009G129300 Sobic003G127800--Sobic005G056400 Sobic003G127800--Sobic001G329400 Sobic003G367500 Sobic003G367500 Sobic003G127800--Sobic003G367500 Sobic006G153400 Sobic006G153400 Sobic003G127800--Sobic006G153400 Sobic010G188300--Sobic007G161500 Sobic010G188300--Sobic005G056400 Sobic010G188300--Sobic010G039500 Sobic010G188300--Sobic003G127800 Sobic010G188300--Sobic003G367500 Sobic010G188300--Sobic001G289500 Sobic010G188300--Sobic004G305800 Sobic010G188300--Sobic001G491000 Sobic010G188300--Sobic003G024300 Sobic001G329400--Sobic003G024300 Sobic001G329400--Sobic007G161500 Sobic006G244000 Sobic006G244000 Sobic001G329400--Sobic006G244000 Sobic001G329400--Sobic003G127800 Sobic001G329400--Sobic009G129300 Sobic007G140800 Sobic007G140800 Sobic001G329400--Sobic007G140800 Sobic004G283100 Sobic004G283100 Sobic001G329400--Sobic004G283100 Sobic001G329400--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic001G329400--Sobic009G104800 Sobic003G370000--Sobic007G161500 Sobic003G370000--Sobic001G289500 Sobic003G370000--Sobic005G056400 Sobic002G370600 Sobic002G370600 Sobic003G370000--Sobic002G370600 Sobic002G314300 Sobic002G314300 Sobic003G370000--Sobic002G314300 Sobic003G370000--Sobic004G305800 Sobic001G020100 Sobic001G020100 Sobic003G370000--Sobic001G020100 Sobic004G238600 Sobic004G238600 Sobic003G370000--Sobic004G238600 Sobic003G370000--Sobic001G076900 Sobic006G238200 Sobic006G238200 Sobic001G491000--Sobic006G238200 Sobic010G181300 Sobic010G181300 Sobic001G491000--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic001G491000--Sobic001G100000 Sobic002G275300 Sobic002G275300 Sobic001G491000--Sobic002G275300 Sobic001G491000--Sobic001G289500 Sobic001G491000--Sobic009G129300 Sobic001G491000--Sobic002G370600 Sobic009G237100 Sobic009G237100 Sobic001G491000--Sobic009G237100 Sobic001G491000--Sobic004G305800 Sobic003G005000 Sobic003G005000 Sobic001G289500--Sobic003G005000 Sobic001G289500--Sobic001G491000 Sobic004G202200 Sobic004G202200 Sobic001G289500--Sobic004G202200 Sobic001G289500--Sobic006G238200 Sobic006G102000 Sobic006G102000 Sobic001G289500--Sobic006G102000 Sobic001G289500--Sobic010G181300 Sobic007G108900 Sobic007G108900 Sobic001G289500--Sobic007G108900 Sobic003G094100 Sobic003G094100 Sobic001G289500--Sobic003G094100 Sobic001G289500--Sobic002G275300 Sobic004G305800--Sobic002G370600 Sobic004G305800--Sobic001G491000 Sobic004G305800--Sobic005G056400 Sobic004G305800--Sobic009G129300 Sobic004G268000 Sobic004G268000 Sobic004G305800--Sobic004G268000 Sobic010G201700 Sobic010G201700 Sobic004G305800--Sobic010G201700 Sobic004G305800--Sobic007G161500 Sobic003G431900 Sobic003G431900 Sobic004G305800--Sobic003G431900 Sobic004G305800--Sobic006G238200 Sobic007G009200 Sobic007G009200 Sobic003G024300--Sobic007G009200 Sobic006G077400 Sobic006G077400 Sobic003G024300--Sobic006G077400 Sobic003G024300--Sobic001G329400 Sobic003G024300--Sobic001G491000 Sobic003G024300--Sobic009G104800 Sobic003G398800 Sobic003G398800 Sobic003G024300--Sobic003G398800 Sobic004G125700 Sobic004G125700 Sobic003G024300--Sobic004G125700 Sobic003G024300--Sobic007G161500 Sobic003G024300--Sobic010G201700
Octagon: transcription factors


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