Gene annotation
Transcriptome id Sobic.005G126300.1,Sobic.005G126300.2
Synonym Sb05g018810
Functional annotation expressed protein
UniProt A0A1B6PS17
Pfam PF03097
Panther DB PTHR23032 PTHR23032:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14020 : Endosomal targeting BRO1-like domain-containing protein
RAP-DB (Rice) LOC_Os11g31570.1,LOC_Os11g31570.2 : expressed protein
MaizeGDB (Corn) Zm00025a029788
Brachypodium KQJ88458 , PNT63603 , PNT63604
Barley HORVU3Hr1G014210.15 , HORVU3Hr1G014210.14 , HORVU3Hr1G014210.16 , HORVU3Hr1G014210.11 , HORVU3Hr1G014210.10 , HORVU3Hr1G014210.13 , HORVU3Hr1G014210.12 , HORVU3Hr1G014210.9 , HORVU3Hr1G014210.8 , HORVU3Hr1G014210.1 , HORVU3Hr1G014210.2 , HORVU3Hr1G014210.5 , HORVU3Hr1G014210.4 , HORVU3Hr1G014210.7 , HORVU3Hr1G014210.6
Wheat TraesCS3B02G093500 , TraesCS3A02G078600 , TraesCS3B02G093500
Populus -


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cDNA sequences
Sobic.005G126300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G097100 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
2 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
3 Sobic.003G327000 bZIP transcription factor domain containing protein, expressed -
4 Sobic.004G059800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsHKT1@3 - Na+ transporter, expressed -
5 Sobic.003G398800 expressed protein -
6 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
7 Sobic.005G188600 - -
8 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
9 Sobic.003G185700 zinc finger family protein, putative, expressed -
10 Sobic.004G270600 MYB family transcription factor, putative, expressed -
11 Sobic.003G185100 peptide transporter PTR2, putative, expressed -
12 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
13 Sobic.001G504400 expressed protein -
14 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
15 Sobic.004G121400 CAX 1c(PubMedID : 22196357)@cation exchanger 3(PubMedID : 26320239)@sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
16 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3
17 Sobic.002G324500 PPDK regulatory protein(PubMedID : 26465154)@PPDK regulatory protein(PubMedID : 26465154)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
18 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
19 Sobic.004G154200 expressed protein -
20 Sobic.007G136200 expressed protein -


Gene co-expression network
sample Sobic005G126300 Sobic005G126300 Sobic001G097100 Sobic001G097100 Sobic005G126300--Sobic001G097100 Sobic010G067100 Sobic010G067100 Sobic005G126300--Sobic010G067100 Sobic003G327000 Sobic003G327000 Sobic005G126300--Sobic003G327000 Sobic004G059800 Sobic004G059800 Sobic005G126300--Sobic004G059800 Sobic003G398800 Sobic003G398800 Sobic005G126300--Sobic003G398800 Sobic009G129300 Sobic009G129300 Sobic005G126300--Sobic009G129300 Sobic005G188600 Sobic005G188600 Sobic005G126300--Sobic005G188600 Sobic003G185900 Sobic003G185900 Sobic005G126300--Sobic003G185900 Sobic003G185700 Sobic003G185700 Sobic005G126300--Sobic003G185700 Sobic010G085100 Sobic010G085100 Sobic001G097100--Sobic010G085100 Sobic001G097100--Sobic010G067100 Sobic001G097100--Sobic003G185900 Sobic008G033000 Sobic008G033000 Sobic001G097100--Sobic008G033000 Sobic004G154200 Sobic004G154200 Sobic001G097100--Sobic004G154200 Sobic002G091600 Sobic002G091600 Sobic001G097100--Sobic002G091600 Sobic001G097100--Sobic005G126300 Sobic003G332700 Sobic003G332700 Sobic001G097100--Sobic003G332700 Sobic008G117000 Sobic008G117000 Sobic001G097100--Sobic008G117000 Sobic010G067100--Sobic003G185900 Sobic001G504400 Sobic001G504400 Sobic010G067100--Sobic001G504400 Sobic010G067100--Sobic003G398800 Sobic001G258200 Sobic001G258200 Sobic010G067100--Sobic001G258200 Sobic007G105500 Sobic007G105500 Sobic010G067100--Sobic007G105500 Sobic006G158100 Sobic006G158100 Sobic010G067100--Sobic006G158100 Sobic002G206300 Sobic002G206300 Sobic010G067100--Sobic002G206300 Sobic009G038701 Sobic009G038701 Sobic010G067100--Sobic009G038701 Sobic010G067100--Sobic008G033000 Sobic009G207900 Sobic009G207900 Sobic003G327000--Sobic009G207900 Sobic003G094100 Sobic003G094100 Sobic003G327000--Sobic003G094100 Sobic003G327000--Sobic001G504400 Sobic001G393300 Sobic001G393300 Sobic003G327000--Sobic001G393300 Sobic002G298800 Sobic002G298800 Sobic003G327000--Sobic002G298800 Sobic003G327000--Sobic009G038701 Sobic007G135800 Sobic007G135800 Sobic003G327000--Sobic007G135800 Sobic002G198300 Sobic002G198300 Sobic003G327000--Sobic002G198300 Sobic010G125833 Sobic010G125833 Sobic003G327000--Sobic010G125833 Sobic003G127800 Sobic003G127800 Sobic004G059800--Sobic003G127800 Sobic009G256100 Sobic009G256100 Sobic004G059800--Sobic009G256100 Sobic004G059800--Sobic009G129300 Sobic003G367500 Sobic003G367500 Sobic004G059800--Sobic003G367500 Sobic004G059800--Sobic003G185900 Sobic004G112100 Sobic004G112100 Sobic004G059800--Sobic004G112100 Sobic006G153400 Sobic006G153400 Sobic004G059800--Sobic006G153400 Sobic010G039500 Sobic010G039500 Sobic004G059800--Sobic010G039500 Sobic004G215800 Sobic004G215800 Sobic004G059800--Sobic004G215800 Sobic006G238200 Sobic006G238200 Sobic003G398800--Sobic006G238200 Sobic003G306200 Sobic003G306200 Sobic003G398800--Sobic003G306200 Sobic009G056700 Sobic009G056700 Sobic003G398800--Sobic009G056700 Sobic007G009200 Sobic007G009200 Sobic003G398800--Sobic007G009200 Sobic007G103400 Sobic007G103400 Sobic003G398800--Sobic007G103400 Sobic003G398800--Sobic009G129300 Sobic002G220900 Sobic002G220900 Sobic003G398800--Sobic002G220900 Sobic003G431700 Sobic003G431700 Sobic003G398800--Sobic003G431700 Sobic001G491000 Sobic001G491000 Sobic003G398800--Sobic001G491000 Sobic009G129300--Sobic001G491000 Sobic010G181300 Sobic010G181300 Sobic009G129300--Sobic010G181300 Sobic009G129300--Sobic003G398800 Sobic009G129300--Sobic003G127800 Sobic004G305800 Sobic004G305800 Sobic009G129300--Sobic004G305800 Sobic009G129300--Sobic006G238200 Sobic002G275300 Sobic002G275300 Sobic009G129300--Sobic002G275300 Sobic004G268000 Sobic004G268000 Sobic009G129300--Sobic004G268000 Sobic007G161500 Sobic007G161500 Sobic009G129300--Sobic007G161500 Sobic001G065600 Sobic001G065600 Sobic005G188600--Sobic001G065600 Sobic001G158900 Sobic001G158900 Sobic005G188600--Sobic001G158900 Sobic006G188000 Sobic006G188000 Sobic005G188600--Sobic006G188000 Sobic003G443500 Sobic003G443500 Sobic005G188600--Sobic003G443500 Sobic006G114900 Sobic006G114900 Sobic005G188600--Sobic006G114900 Sobic006G101500 Sobic006G101500 Sobic005G188600--Sobic006G101500 Sobic008G115900 Sobic008G115900 Sobic005G188600--Sobic008G115900 Sobic001G098301 Sobic001G098301 Sobic005G188600--Sobic001G098301 Sobic006G160400 Sobic006G160400 Sobic005G188600--Sobic006G160400 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic003G185900--Sobic010G067100 Sobic003G185900--Sobic007G105500 Sobic003G185900--Sobic004G215800 Sobic005G068700 Sobic005G068700 Sobic003G185900--Sobic005G068700 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic003G185700--Sobic005G126300 Sobic003G185700--Sobic006G160400 Sobic010G164200 Sobic010G164200 Sobic003G185700--Sobic010G164200 Sobic003G185700--Sobic005G188600 Sobic003G185700--Sobic003G398800 Sobic005G165500 Sobic005G165500 Sobic003G185700--Sobic005G165500 Sobic003G185700--Sobic001G158900 Sobic003G185700--Sobic001G097100 Sobic003G185700--Sobic009G056700
Octagon: transcription factors


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