Gene annotation
Transcriptome id Sobic.004G123600.2,Sobic.004G123600.6,Sobic.004G123600.4,Sobic.004G123600.5
Synonym PRORP1, Sb04g010320
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
PPR repeat domain containing protein, putative, expressed
UniProt A0A1Z5RM09
Pfam PF11977 PF13812
Panther DB PTHR13547 PTHR13547:SF1
NCBI CDD -
KEGG Orthology K18213; proteinaceous RNase P
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32230 : proteinaceous RNase P 1
RAP-DB (Rice) LOC_Os02g17360.2 : PPR repeat domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a019819
Brachypodium KQJ94371 , KQJ94368 , KQJ94366 , KQJ94367 , KQJ94365 , PNT66325 , PNT66324 , PNT66323
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G123600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G381900 PRC-barrel domain protein, putative, expressed -
2 Sobic.009G157000 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
3 Sobic.006G111500 expressed protein -
4 Sobic.006G248700 AAA-type ATPase family protein, putative, expressed -
5 Sobic.003G211500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.003G132300 MYB family transcription factor, putative, expressed -
7 Sobic.004G123300 oxidoreductase/ transition metal ion binding protein, putative, expressed -
8 Sobic.006G122900 expressed protein K15360: STRA13, CENPX, centromere protein X
9 Sobic.004G132400 lectin-like receptor kinase, putative, expressed -
10 Sobic.004G119500 peptidase, putative, expressed K03100: signal peptidase I
11 Sobic.006G073001 - -
12 Sobic.004G310700 glutaredoxin 2, putative, expressed -
13 Sobic.009G251300 endonuclease, putative, expressed -
14 Sobic.005G003900 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase
15 Sobic.002G285450 - -
16 Sobic.002G283800 AIG2-like family domain containing protein, expressed -
17 Sobic.003G305300 - -
18 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
19 Sobic.007G090448 - -
20 Sobic.010G267650 - -


Gene co-expression network
sample Sobic004G123600 Sobic004G123600 Sobic001G381900 Sobic001G381900 Sobic004G123600--Sobic001G381900 Sobic009G157000 Sobic009G157000 Sobic004G123600--Sobic009G157000 Sobic006G111500 Sobic006G111500 Sobic004G123600--Sobic006G111500 Sobic006G248700 Sobic006G248700 Sobic004G123600--Sobic006G248700 Sobic003G211500 Sobic003G211500 Sobic004G123600--Sobic003G211500 Sobic003G132300 Sobic003G132300 Sobic004G123600--Sobic003G132300 Sobic004G123300 Sobic004G123300 Sobic004G123600--Sobic004G123300 Sobic006G122900 Sobic006G122900 Sobic004G123600--Sobic006G122900 Sobic004G132400 Sobic004G132400 Sobic004G123600--Sobic004G132400 Sobic004G204500 Sobic004G204500 Sobic001G381900--Sobic004G204500 Sobic001G381900--Sobic004G123600 Sobic001G381900--Sobic003G211500 Sobic010G268100 Sobic010G268100 Sobic001G381900--Sobic010G268100 Sobic004G119500 Sobic004G119500 Sobic001G381900--Sobic004G119500 Sobic001G381900--Sobic004G123300 Sobic001G381900--Sobic006G248700 Sobic001G381900--Sobic003G132300 Sobic009G237800 Sobic009G237800 Sobic001G381900--Sobic009G237800 Sobic009G157000--Sobic006G111500 Sobic002G285450 Sobic002G285450 Sobic009G157000--Sobic002G285450 Sobic009G157000--Sobic004G123600 Sobic007G139000 Sobic007G139000 Sobic009G157000--Sobic007G139000 Sobic002G283800 Sobic002G283800 Sobic009G157000--Sobic002G283800 Sobic003G191800 Sobic003G191800 Sobic009G157000--Sobic003G191800 Sobic004G310700 Sobic004G310700 Sobic009G157000--Sobic004G310700 Sobic002G406400 Sobic002G406400 Sobic009G157000--Sobic002G406400 Sobic009G157000--Sobic004G132400 Sobic006G111500--Sobic009G157000 Sobic001G516200 Sobic001G516200 Sobic006G111500--Sobic001G516200 Sobic006G111500--Sobic004G123600 Sobic006G111500--Sobic007G139000 Sobic010G267650 Sobic010G267650 Sobic006G111500--Sobic010G267650 Sobic006G111500--Sobic002G285450 Sobic006G111500--Sobic004G310700 Sobic006G111500--Sobic003G191800 Sobic006G111500--Sobic004G132400 Sobic006G248700--Sobic004G123600 Sobic006G248700--Sobic001G381900 Sobic001G316700 Sobic001G316700 Sobic006G248700--Sobic001G316700 Sobic003G028800 Sobic003G028800 Sobic006G248700--Sobic003G028800 Sobic008G093500 Sobic008G093500 Sobic006G248700--Sobic008G093500 Sobic006G248700--Sobic003G211500 Sobic003G037900 Sobic003G037900 Sobic006G248700--Sobic003G037900 Sobic006G248700--Sobic004G310700 Sobic007G062100 Sobic007G062100 Sobic006G248700--Sobic007G062100 Sobic007G132000 Sobic007G132000 Sobic003G211500--Sobic007G132000 Sobic003G211500--Sobic003G132300 Sobic003G211500--Sobic001G381900 Sobic003G211500--Sobic004G132400 Sobic003G211500--Sobic004G204500 Sobic006G229300 Sobic006G229300 Sobic003G211500--Sobic006G229300 Sobic003G211500--Sobic004G119500 Sobic004G023400 Sobic004G023400 Sobic003G211500--Sobic004G023400 Sobic001G147400 Sobic001G147400 Sobic003G211500--Sobic001G147400 Sobic003G132300--Sobic006G229300 Sobic003G305300 Sobic003G305300 Sobic003G132300--Sobic003G305300 Sobic003G132300--Sobic004G132400 Sobic003G132300--Sobic003G211500 Sobic004G202600 Sobic004G202600 Sobic003G132300--Sobic004G202600 Sobic009G212000 Sobic009G212000 Sobic003G132300--Sobic009G212000 Sobic009G179800 Sobic009G179800 Sobic003G132300--Sobic009G179800 Sobic002G215000 Sobic002G215000 Sobic003G132300--Sobic002G215000 Sobic003G132300--Sobic004G023400 Sobic007G027000 Sobic007G027000 Sobic004G123300--Sobic007G027000 Sobic004G123300--Sobic001G381900 Sobic007G123600 Sobic007G123600 Sobic004G123300--Sobic007G123600 Sobic003G019000 Sobic003G019000 Sobic004G123300--Sobic003G019000 Sobic004G241700 Sobic004G241700 Sobic004G123300--Sobic004G241700 Sobic004G123300--Sobic004G119500 Sobic004G123300--Sobic004G123600 Sobic003G396300 Sobic003G396300 Sobic004G123300--Sobic003G396300 Sobic009G137000 Sobic009G137000 Sobic004G123300--Sobic009G137000 Sobic006G122900--Sobic003G396300 Sobic006G073001 Sobic006G073001 Sobic006G122900--Sobic006G073001 Sobic008G081150 Sobic008G081150 Sobic006G122900--Sobic008G081150 Sobic006G122900--Sobic003G037900 Sobic006G122900--Sobic004G123600 Sobic004G307700 Sobic004G307700 Sobic006G122900--Sobic004G307700 Sobic006G266600 Sobic006G266600 Sobic006G122900--Sobic006G266600 Sobic003G284500 Sobic003G284500 Sobic006G122900--Sobic003G284500 Sobic002G166500 Sobic002G166500 Sobic006G122900--Sobic002G166500 Sobic004G132400--Sobic001G147400 Sobic004G132400--Sobic003G132300 Sobic004G132400--Sobic003G211500 Sobic004G132400--Sobic002G285450 Sobic004G132400--Sobic002G283800 Sobic001G516800 Sobic001G516800 Sobic004G132400--Sobic001G516800 Sobic004G132400--Sobic004G204500 Sobic008G147101 Sobic008G147101 Sobic004G132400--Sobic008G147101 Sobic004G132400--Sobic006G229300
Octagon: transcription factors


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