Gene annotation
Transcriptome id Sobic.004G096400.2,Sobic.004G096400.1
Synonym ATBBETA, Sb04g007940
Functional annotation serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed
UniProt A0A194YNR0 , A0A194YNN2
Pfam -
Panther DB PTHR11871 PTHR11871:SF11
NCBI CDD -
KEGG Orthology K04354; serine/threonine-protein phosphatase 2A regulatory subunit B
Gene Ontology GO:0000159; protein phosphatase type 2A complex


Orthologs (automatic annotation)
TAIR AT1G17720 : Protein phosphatase 2A, regulatory subunit PR55
RAP-DB (Rice) LOC_Os02g13110.2 : serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed
MaizeGDB (Corn) Zm00025a051002 , Zm00025a034544
Brachypodium KQK17955 , KQK17954 , KQJ94089 , KQJ94088
Barley HORVU7Hr1G087940.3 , HORVU6Hr1G039910.21 , HORVU6Hr1G039910.20 , HORVU6Hr1G039910.23 , HORVU6Hr1G039910.22 , HORVU6Hr1G039910.2 , HORVU6Hr1G039910.3 , HORVU6Hr1G039910.1 , HORVU6Hr1G039910.6 , HORVU6Hr1G039910.7 , HORVU6Hr1G039910.4 , HORVU6Hr1G039910.5 , HORVU6Hr1G039910.8 , HORVU6Hr1G039910.9 , HORVU7Hr1G087940.11 , HORVU7Hr1G087940.10 , HORVU7Hr1G087940.12 , HORVU7Hr1G087940.5 , HORVU7Hr1G087940.4 , HORVU7Hr1G087940.7 , HORVU7Hr1G087940.6 , HORVU7Hr1G087940.1 , HORVU7Hr1G087940.9 , HORVU7Hr1G087940.2 , HORVU7Hr1G087940.8 , HORVU6Hr1G039910.10 , HORVU6Hr1G039910.11 , HORVU6Hr1G039910.12 , HORVU6Hr1G039910.13 , HORVU6Hr1G039910.14 , HORVU6Hr1G039910.15 , HORVU6Hr1G039910.16 , HORVU6Hr1G039910.17 , HORVU6Hr1G039910.18 , HORVU6Hr1G039910.19
Wheat TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6D02G178300 , TraesCS6B02G216800 , TraesCS6B02G216800 , TraesCS6B02G216800 , TraesCS6B02G216800 , TraesCS6B02G216800 , TraesCS7A02G358700 , TraesCS6B02G216800 , TraesCS7A02G358700 , TraesCS6A02G187800 , TraesCS6A02G187800 , TraesCS6A02G187800 , TraesCS6A02G187800 , TraesCS6A02G187800 , TraesCS6D02G178300 , TraesCS7B02G268700 , TraesCS7B02G268700 , TraesCS7D02G364000 , TraesCS7D02G364000
Populus -


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cDNA sequences
Sobic.004G096400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
2 Sobic.009G192300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
3 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
4 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
5 Sobic.009G084900 expressed protein -
6 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
7 Sobic.003G249600 vacuolar protein sorting-associated protein 16, putative, expressed -
8 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
9 Sobic.007G132100 myrosinase precursor, putative, expressed -
10 Sobic.003G095900 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
11 Sobic.004G322400 WD40-like, putative, expressed -
12 Sobic.004G357100 expressed protein -
13 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
14 Sobic.002G063900 zinc ion binding protein, putative, expressed -
15 Sobic.001G214600 expressed protein -
16 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
17 Sobic.003G416700 homeobox domain containing protein, expressed -
18 Sobic.002G154000 EDM2, putative, expressed -
19 Sobic.001G308400 expressed protein -
20 Sobic.004G265500 SET domain protein SDG117, putative, expressed -


Gene co-expression network
sample Sobic004G096400 Sobic004G096400 Sobic006G234700 Sobic006G234700 Sobic004G096400--Sobic006G234700 Sobic009G192300 Sobic009G192300 Sobic004G096400--Sobic009G192300 Sobic010G059500 Sobic010G059500 Sobic004G096400--Sobic010G059500 Sobic001G493200 Sobic001G493200 Sobic004G096400--Sobic001G493200 Sobic009G084900 Sobic009G084900 Sobic004G096400--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic004G096400--Sobic001G433800 Sobic003G249600 Sobic003G249600 Sobic004G096400--Sobic003G249600 Sobic006G077200 Sobic006G077200 Sobic004G096400--Sobic006G077200 Sobic007G132100 Sobic007G132100 Sobic004G096400--Sobic007G132100 Sobic006G234700--Sobic004G096400 Sobic006G234700--Sobic010G059500 Sobic006G234700--Sobic009G192300 Sobic007G042400 Sobic007G042400 Sobic006G234700--Sobic007G042400 Sobic003G444800 Sobic003G444800 Sobic006G234700--Sobic003G444800 Sobic006G234700--Sobic001G493200 Sobic006G234700--Sobic009G084900 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic009G192300--Sobic004G096400 Sobic009G192300--Sobic006G234700 Sobic009G192300--Sobic010G059500 Sobic010G034100 Sobic010G034100 Sobic009G192300--Sobic010G034100 Sobic009G192300--Sobic009G084900 Sobic009G192300--Sobic003G444800 Sobic002G260400 Sobic002G260400 Sobic009G192300--Sobic002G260400 SobicK028600 SobicK028600 Sobic009G192300--SobicK028600 Sobic007G125000 Sobic007G125000 Sobic009G192300--Sobic007G125000 Sobic010G059500--Sobic009G084900 Sobic009G131300 Sobic009G131300 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic010G059500--Sobic004G096400 Sobic010G059500--Sobic006G234700 Sobic001G145400 Sobic001G145400 Sobic010G059500--Sobic001G145400 Sobic010G059500--Sobic010G034100 Sobic010G059500--Sobic006G077200 Sobic010G059500--Sobic001G493200 Sobic001G493200--Sobic009G084900 Sobic003G266001 Sobic003G266001 Sobic001G493200--Sobic003G266001 Sobic001G493200--Sobic010G059500 Sobic001G493200--Sobic001G433800 Sobic004G072100 Sobic004G072100 Sobic001G493200--Sobic004G072100 Sobic001G493200--Sobic004G096400 Sobic001G493200--Sobic007G132100 Sobic001G493200--Sobic006G077200 Sobic003G408600 Sobic003G408600 Sobic001G493200--Sobic003G408600 Sobic009G084900--Sobic010G059500 Sobic003G072200 Sobic003G072200 Sobic009G084900--Sobic003G072200 Sobic009G084900--Sobic001G493200 Sobic009G084900--Sobic001G433800 Sobic009G084900--Sobic009G131300 Sobic002G133300 Sobic002G133300 Sobic009G084900--Sobic002G133300 Sobic009G084900--Sobic006G077200 Sobic008G082500 Sobic008G082500 Sobic009G084900--Sobic008G082500 Sobic004G260100 Sobic004G260100 Sobic009G084900--Sobic004G260100 Sobic010G112100 Sobic010G112100 Sobic001G433800--Sobic010G112100 Sobic003G360400 Sobic003G360400 Sobic001G433800--Sobic003G360400 Sobic007G063000 Sobic007G063000 Sobic001G433800--Sobic007G063000 Sobic005G112300 Sobic005G112300 Sobic001G433800--Sobic005G112300 Sobic004G242400 Sobic004G242400 Sobic001G433800--Sobic004G242400 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic003G249600--Sobic006G077200 Sobic003G249600--Sobic004G096400 Sobic007G120500 Sobic007G120500 Sobic003G249600--Sobic007G120500 Sobic003G249600--Sobic007G132100 Sobic003G126600 Sobic003G126600 Sobic003G249600--Sobic003G126600 Sobic003G249600--Sobic004G072100 Sobic004G322400 Sobic004G322400 Sobic003G249600--Sobic004G322400 Sobic008G124800 Sobic008G124800 Sobic003G249600--Sobic008G124800 Sobic004G039600 Sobic004G039600 Sobic003G249600--Sobic004G039600 Sobic006G077200--Sobic009G084900 Sobic010G185400 Sobic010G185400 Sobic006G077200--Sobic010G185400 Sobic006G077200--Sobic010G059500 Sobic006G077200--Sobic001G145400 Sobic006G077200--Sobic001G493200 Sobic006G077200--Sobic003G249600 Sobic006G077200--Sobic008G082500 Sobic003G189600 Sobic003G189600 Sobic006G077200--Sobic003G189600 Sobic006G077200--Sobic004G096400 Sobic007G218000 Sobic007G218000 Sobic007G132100--Sobic007G218000 Sobic007G132100--Sobic004G072100 Sobic007G132100--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic007G132100--Sobic004G178200 Sobic006G131000 Sobic006G131000 Sobic007G132100--Sobic006G131000 Sobic006G012500 Sobic006G012500 Sobic007G132100--Sobic006G012500 Sobic009G044800 Sobic009G044800 Sobic007G132100--Sobic009G044800 Sobic008G099800 Sobic008G099800 Sobic007G132100--Sobic008G099800 Sobic010G204400 Sobic010G204400 Sobic007G132100--Sobic010G204400
Octagon: transcription factors


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