Gene annotation
Transcriptome id Sobic.002G077500.1
Synonym Sb02g006470
Functional annotation LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5XDC3 , P81368
Pfam PF00234
Panther DB PTHR34481 PTHR34481:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g12080.1 : LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.002G077500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G186400 SSA1 - 2S albumin seed storage family protein precursor, expressed -
2 Sobic.005G112066 - -
3 Sobic.001G326000 expressed protein -
4 Sobic.007G049400 OsFBX381 - F-box domain containing protein, expressed -
5 Sobic.003G105600 no apical meristem protein, putative, expressed -
6 Sobic.007G083300 paired amphipathic helix repeat-containing protein, putative, expressed -
7 Sobic.K043500 MYB family transcription factor, putative, expressed -
8 Sobic.005G140400 - -
9 Sobic.007G070700 OsFBX265 - F-box domain containing protein, expressed -
10 Sobic.002G091800 peptide transporter PTR2, putative, expressed -
11 Sobic.002G077600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.007G156300 similar to Abscisic acid 8'-hydroxylase 2(PubMedID : 29862293)@cytochrome P450, putative, expressed -
13 Sobic.002G344900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
14 Sobic.001G253501 - -
15 Sobic.009G245750 - -
16 Sobic.006G031600 expressed protein -
17 Sobic.010G031600 early nodulin 93 ENOD93 protein, putative, expressed -
18 Sobic.003G247700 cold acclimation protein WCOR413, putative, expressed -
19 Sobic.001G112250 - -
20 Sobic.010G136300 osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -


Gene co-expression network
sample Sobic002G077500 Sobic002G077500 Sobic009G186400 Sobic009G186400 Sobic002G077500--Sobic009G186400 Sobic005G112066 Sobic005G112066 Sobic002G077500--Sobic005G112066 Sobic001G326000 Sobic001G326000 Sobic002G077500--Sobic001G326000 Sobic007G049400 Sobic007G049400 Sobic002G077500--Sobic007G049400 Sobic003G105600 Sobic003G105600 Sobic002G077500--Sobic003G105600 Sobic007G083300 Sobic007G083300 Sobic002G077500--Sobic007G083300 SobicK043500 SobicK043500 Sobic002G077500--SobicK043500 Sobic005G140400 Sobic005G140400 Sobic002G077500--Sobic005G140400 Sobic007G070700 Sobic007G070700 Sobic002G077500--Sobic007G070700 Sobic009G186400--Sobic002G077500 Sobic009G186400--SobicK043500 Sobic009G186400--Sobic003G105600 Sobic009G186400--Sobic001G326000 Sobic009G186400--Sobic007G083300 Sobic009G186400--Sobic005G112066 Sobic009G186400--Sobic007G049400 Sobic009G186400--Sobic007G070700 Sobic002G077600 Sobic002G077600 Sobic009G186400--Sobic002G077600 Sobic005G112066--Sobic002G077500 Sobic005G112066--Sobic007G049400 Sobic005G112066--Sobic001G326000 Sobic005G112066--Sobic005G140400 Sobic002G091800 Sobic002G091800 Sobic005G112066--Sobic002G091800 Sobic005G112066--Sobic009G186400 Sobic007G156300 Sobic007G156300 Sobic005G112066--Sobic007G156300 Sobic002G344900 Sobic002G344900 Sobic005G112066--Sobic002G344900 Sobic006G031600 Sobic006G031600 Sobic005G112066--Sobic006G031600 Sobic001G326000--Sobic002G077500 Sobic001G326000--Sobic007G156300 Sobic001G326000--Sobic005G112066 Sobic001G326000--Sobic009G186400 Sobic001G326000--Sobic003G105600 Sobic001G326000--Sobic006G031600 Sobic004G313800 Sobic004G313800 Sobic001G326000--Sobic004G313800 Sobic005G223200 Sobic005G223200 Sobic001G326000--Sobic005G223200 Sobic001G326000--Sobic002G344900 Sobic007G049400--Sobic005G112066 Sobic007G049400--Sobic002G077500 Sobic007G049400--Sobic002G077600 Sobic001G253501 Sobic001G253501 Sobic007G049400--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic007G049400--Sobic009G245750 Sobic007G049400--Sobic005G140400 Sobic007G049400--Sobic007G070700 Sobic007G049400--Sobic007G083300 Sobic001G112250 Sobic001G112250 Sobic007G049400--Sobic001G112250 Sobic003G105600--Sobic009G186400 Sobic003G105600--Sobic001G326000 Sobic003G105600--Sobic002G077500 Sobic008G013100 Sobic008G013100 Sobic003G105600--Sobic008G013100 Sobic009G022700 Sobic009G022700 Sobic003G105600--Sobic009G022700 Sobic003G105600--Sobic007G156300 Sobic006G059900 Sobic006G059900 Sobic003G105600--Sobic006G059900 Sobic003G105600--SobicK043500 Sobic003G105600--Sobic005G112066 Sobic007G083300--Sobic007G070700 Sobic007G083300--Sobic002G077600 Sobic003G247700 Sobic003G247700 Sobic007G083300--Sobic003G247700 Sobic007G083300--SobicK043500 Sobic002G211700 Sobic002G211700 Sobic007G083300--Sobic002G211700 Sobic007G083300--Sobic001G253501 Sobic007G083300--Sobic009G245750 Sobic009G001600 Sobic009G001600 Sobic007G083300--Sobic009G001600 Sobic001G535900 Sobic001G535900 Sobic007G083300--Sobic001G535900 SobicK043500--Sobic007G083300 SobicK043500--Sobic007G070700 SobicK043500--Sobic009G186400 SobicK043500--Sobic002G077600 SobicK043500--Sobic003G247700 SobicK043500--Sobic002G077500 SobicK043500--Sobic007G049400 SobicK043500--Sobic002G211700 SobicK043500--Sobic001G253501 Sobic005G174900 Sobic005G174900 Sobic005G140400--Sobic005G174900 Sobic005G140400--Sobic002G091800 Sobic005G140400--Sobic007G049400 Sobic010G148600 Sobic010G148600 Sobic005G140400--Sobic010G148600 Sobic001G249233 Sobic001G249233 Sobic005G140400--Sobic001G249233 Sobic006G062700 Sobic006G062700 Sobic005G140400--Sobic006G062700 Sobic005G140400--Sobic005G112066 Sobic005G140400--Sobic007G070700 Sobic005G140400--Sobic002G077500 Sobic007G070700--Sobic002G077600 Sobic007G070700--Sobic007G083300 Sobic007G070700--Sobic003G247700 Sobic007G070700--Sobic001G253501 Sobic007G070700--Sobic009G245750 Sobic007G070700--Sobic002G211700 Sobic007G070700--Sobic009G001600 Sobic007G070700--Sobic001G112250 Sobic007G070700--SobicK043500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.