Gene annotation
Transcriptome id Sobic.001G007200.3,Sobic.001G007200.2
Synonym ATHSF3, HSF3, HSFA1B, Sb01g000730, ATHSFA1B
Functional annotation HSF-type DNA-binding domain containing protein, expressed
UniProt C5WRZ8
Pfam PF00447
Panther DB PTHR10015:SF149 PTHR10015 PTHR10015 PTHR10015:SF149
NCBI CDD -
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity GO:0003700DNA-binding transcription factor activity GO:0005634nucleus GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT5G16820 : heat shock factor 3
RAP-DB (Rice) LOC_Os03g63750.1 : HSF-type DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005373 , Zm00025a040051 , Zm00025a016308 , Zm00025a009095 , Zm00025a020360
Brachypodium KQK12029 , KQK12030
Barley HORVU5Hr1G123770.4 , HORVU5Hr1G123770.1 , HORVU5Hr1G123770.3 , HORVU5Hr1G123770.2 , HORVU6Hr1G017910.1
Wheat TraesCS4A02G322300 , TraesCS5B02G556200 , TraesCS6B02G127000 , TraesCS6A02G098800 , TraesCS5D02G553300 , TraesCS6D02G083800
Populus -


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cDNA sequences
Sobic.001G007200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
2 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
3 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
4 Sobic.010G253800 expressed protein -
5 Sobic.004G086600 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
6 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
7 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
8 Sobic.004G141700 expressed protein -
9 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
10 Sobic.001G054200 green ripe-like, putative, expressed -
11 Sobic.004G104900 CGMC_GSK.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
12 Sobic.002G256300 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.002G247500 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
14 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
15 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
16 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
17 Sobic.010G168600 ethylene-responsive element-binding protein, putative, expressed -
18 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
20 Sobic.009G232400 expressed protein -


Gene co-expression network
sample Sobic001G007200 Sobic001G007200 Sobic010G083700 Sobic010G083700 Sobic001G007200--Sobic010G083700 Sobic001G415500 Sobic001G415500 Sobic001G007200--Sobic001G415500 Sobic007G186300 Sobic007G186300 Sobic001G007200--Sobic007G186300 Sobic010G253800 Sobic010G253800 Sobic001G007200--Sobic010G253800 Sobic004G086600 Sobic004G086600 Sobic001G007200--Sobic004G086600 Sobic001G073000 Sobic001G073000 Sobic001G007200--Sobic001G073000 Sobic009G246950 Sobic009G246950 Sobic001G007200--Sobic009G246950 Sobic004G141700 Sobic004G141700 Sobic001G007200--Sobic004G141700 Sobic009G146100 Sobic009G146100 Sobic001G007200--Sobic009G146100 Sobic006G263900 Sobic006G263900 Sobic010G083700--Sobic006G263900 Sobic010G168600 Sobic010G168600 Sobic010G083700--Sobic010G168600 Sobic001G054200 Sobic001G054200 Sobic010G083700--Sobic001G054200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic004G293700 Sobic004G293700 Sobic010G083700--Sobic004G293700 Sobic010G083700--Sobic010G253800 Sobic002G256300 Sobic002G256300 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic001G415500--Sobic001G007200 Sobic008G161800 Sobic008G161800 Sobic001G415500--Sobic008G161800 Sobic003G253000 Sobic003G253000 Sobic001G415500--Sobic003G253000 Sobic001G415500--Sobic009G146100 Sobic006G108400 Sobic006G108400 Sobic001G415500--Sobic006G108400 Sobic006G141500 Sobic006G141500 Sobic001G415500--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic001G415500--Sobic004G049900 Sobic001G415500--Sobic004G293700 Sobic010G121300 Sobic010G121300 Sobic001G415500--Sobic010G121300 Sobic007G186300--Sobic003G007500 Sobic007G186300--Sobic001G054200 Sobic003G115800 Sobic003G115800 Sobic007G186300--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic007G186300--Sobic003G248600 Sobic007G186300--Sobic001G007200 Sobic007G186300--Sobic009G246950 Sobic007G186300--Sobic010G083700 Sobic007G186300--Sobic009G146100 Sobic009G152200 Sobic009G152200 Sobic007G186300--Sobic009G152200 Sobic010G253800--Sobic009G146100 Sobic010G253800--Sobic004G293700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic002G352700 Sobic002G352700 Sobic010G253800--Sobic002G352700 Sobic010G253800--Sobic001G007200 Sobic010G253800--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic010G253800--Sobic009G171700 Sobic010G253800--Sobic001G054200 Sobic007G168600 Sobic007G168600 Sobic004G086600--Sobic007G168600 Sobic007G045600 Sobic007G045600 Sobic004G086600--Sobic007G045600 Sobic004G086600--Sobic001G007200 Sobic001G502200 Sobic001G502200 Sobic004G086600--Sobic001G502200 Sobic006G232200 Sobic006G232200 Sobic004G086600--Sobic006G232200 Sobic001G461900 Sobic001G461900 Sobic004G086600--Sobic001G461900 Sobic003G124800 Sobic003G124800 Sobic004G086600--Sobic003G124800 Sobic004G086600--Sobic001G415500 Sobic003G015900 Sobic003G015900 Sobic004G086600--Sobic003G015900 Sobic009G228800 Sobic009G228800 Sobic001G073000--Sobic009G228800 Sobic001G073000--Sobic010G083700 Sobic001G073000--Sobic001G007200 Sobic001G073000--Sobic001G415500 Sobic001G073000--Sobic007G186300 Sobic001G073000--Sobic001G054200 Sobic001G073000--Sobic009G246950 Sobic001G073000--Sobic010G253800 Sobic001G073000--Sobic003G248600 Sobic009G246950--Sobic002G256300 Sobic007G203700 Sobic007G203700 Sobic009G246950--Sobic007G203700 Sobic009G246950--Sobic010G168600 Sobic009G246950--Sobic010G083700 Sobic009G246950--Sobic001G054200 Sobic009G246950--Sobic007G186300 Sobic009G246950--Sobic009G171700 Sobic008G180900 Sobic008G180900 Sobic009G246950--Sobic008G180900 Sobic009G246950--Sobic001G007200 Sobic009G232400 Sobic009G232400 Sobic004G141700--Sobic009G232400 Sobic004G141700--Sobic001G007200 Sobic010G193800 Sobic010G193800 Sobic004G141700--Sobic010G193800 Sobic001G402300 Sobic001G402300 Sobic004G141700--Sobic001G402300 Sobic001G226100 Sobic001G226100 Sobic004G141700--Sobic001G226100 Sobic004G141700--Sobic001G054200 Sobic010G018700 Sobic010G018700 Sobic004G141700--Sobic010G018700 Sobic004G141700--Sobic010G083700 Sobic001G439600 Sobic001G439600 Sobic004G141700--Sobic001G439600 Sobic009G146100--Sobic010G253800 Sobic009G146100--Sobic003G253000 Sobic009G146100--Sobic001G415500 Sobic001G433400 Sobic001G433400 Sobic009G146100--Sobic001G433400 Sobic009G135600 Sobic009G135600 Sobic009G146100--Sobic009G135600 Sobic009G146100--Sobic008G161800 Sobic009G146100--Sobic007G186300 Sobic009G146100--Sobic001G461900 Sobic009G146100--Sobic007G045600
Octagon: transcription factors


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