Gene annotation
Transcriptome id Sobic.004G293700.1
Synonym PEX19-1, AtPEX19-1, Sb04g032760
Functional annotation peroxisomal biogenesis factor 19, putative, expressed
UniProt C5Y1H6
Pfam PF04614
Panther DB PTHR12774
NCBI CDD KOG3133; 40 kDa farnesylated protein associated with peroxisomes
KEGG Orthology K13337; peroxin-19
Gene Ontology GO:0005777; peroxisome


Orthologs (automatic annotation)
TAIR AT3G03490 : peroxin 19-1
RAP-DB (Rice) LOC_Os02g44220.1 : peroxisomal biogenesis factor 19, putative, expressed
MaizeGDB (Corn) Zm00025a032224 , Zm00025a021391
Brachypodium KQK00638 , KQK00639
Barley HORVU0Hr1G023510.2 , HORVU0Hr1G023510.1
Wheat TraesCS6B02G276200 , TraesCS6D02G230600 , TraesCS6D02G230600 , TraesCS6D02G230600 , TraesCS6D02G230600 , TraesCS6B02G276200 , TraesCS6A02G248500 , TraesCS6A02G248500
Populus -


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cDNA sequences
Sobic.004G293700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G253800 expressed protein -
2 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
3 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
4 Sobic.001G054200 green ripe-like, putative, expressed -
5 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
6 Sobic.009G171700 SAG20, putative, expressed -
7 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
8 Sobic.006G141500 expressed protein -
9 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
10 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
11 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
12 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
13 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
14 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
15 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
16 Sobic.009G246950 - K12898: heterogeneous nuclear ribonucleoprotein F/H
17 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
18 Sobic.007G059900 DUF292 domain containing protein, expressed -
19 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
20 Sobic.010G121300 nitrate-induced NOI protein, putative, expressed -


Gene co-expression network
sample Sobic004G293700 Sobic004G293700 Sobic010G253800 Sobic010G253800 Sobic004G293700--Sobic010G253800 Sobic004G079100 Sobic004G079100 Sobic004G293700--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic004G293700--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic004G293700--Sobic001G054200 Sobic004G248800 Sobic004G248800 Sobic004G293700--Sobic004G248800 Sobic009G171700 Sobic009G171700 Sobic004G293700--Sobic009G171700 Sobic002G264400 Sobic002G264400 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic003G220600 Sobic003G220600 Sobic004G293700--Sobic003G220600 Sobic009G146100 Sobic009G146100 Sobic010G253800--Sobic009G146100 Sobic010G253800--Sobic004G293700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic002G352700 Sobic002G352700 Sobic010G253800--Sobic002G352700 Sobic001G007200 Sobic001G007200 Sobic010G253800--Sobic001G007200 Sobic006G263900 Sobic006G263900 Sobic010G253800--Sobic006G263900 Sobic010G253800--Sobic009G171700 Sobic010G253800--Sobic001G054200 Sobic004G079100--Sobic004G293700 Sobic001G138300 Sobic001G138300 Sobic004G079100--Sobic001G138300 Sobic004G079100--Sobic001G054200 Sobic004G079100--Sobic010G083700 Sobic003G115800 Sobic003G115800 Sobic004G079100--Sobic003G115800 Sobic007G186300 Sobic007G186300 Sobic004G079100--Sobic007G186300 Sobic009G246950 Sobic009G246950 Sobic004G079100--Sobic009G246950 Sobic004G079100--Sobic009G171700 Sobic001G371300 Sobic001G371300 Sobic004G079100--Sobic001G371300 Sobic010G083700--Sobic006G263900 Sobic010G168600 Sobic010G168600 Sobic010G083700--Sobic010G168600 Sobic010G083700--Sobic001G054200 Sobic010G083700--Sobic001G007200 Sobic010G083700--Sobic009G246950 Sobic010G083700--Sobic004G293700 Sobic010G083700--Sobic010G253800 Sobic002G256300 Sobic002G256300 Sobic010G083700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic010G083700--Sobic003G007500 Sobic001G054200--Sobic010G083700 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic001G054200--Sobic007G186300 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic001G054200--Sobic003G115800 Sobic004G248800--Sobic006G141500 Sobic001G529000 Sobic001G529000 Sobic004G248800--Sobic001G529000 Sobic010G039800 Sobic010G039800 Sobic004G248800--Sobic010G039800 Sobic003G253000 Sobic003G253000 Sobic004G248800--Sobic003G253000 Sobic004G248800--Sobic004G293700 Sobic008G161800 Sobic008G161800 Sobic004G248800--Sobic008G161800 Sobic002G263800 Sobic002G263800 Sobic004G248800--Sobic002G263800 Sobic002G218000 Sobic002G218000 Sobic004G248800--Sobic002G218000 Sobic003G249800 Sobic003G249800 Sobic004G248800--Sobic003G249800 Sobic001G078500 Sobic001G078500 Sobic009G171700--Sobic001G078500 Sobic009G171700--Sobic010G168600 Sobic009G171700--Sobic009G246950 Sobic009G171700--Sobic004G293700 Sobic009G171700--Sobic010G083700 Sobic009G171700--Sobic010G253800 Sobic008G180900 Sobic008G180900 Sobic009G171700--Sobic008G180900 Sobic009G171700--Sobic007G186300 Sobic009G171700--Sobic002G256300 Sobic006G264300 Sobic006G264300 Sobic002G264400--Sobic006G264300 Sobic002G264400--Sobic004G293700 Sobic002G267500 Sobic002G267500 Sobic002G264400--Sobic002G267500 Sobic002G180600 Sobic002G180600 Sobic002G264400--Sobic002G180600 Sobic002G264400--Sobic003G253000 Sobic002G202300 Sobic002G202300 Sobic002G264400--Sobic002G202300 Sobic002G264400--Sobic010G253800 Sobic005G034400 Sobic005G034400 Sobic002G264400--Sobic005G034400 Sobic003G075500 Sobic003G075500 Sobic002G264400--Sobic003G075500 Sobic006G141500--Sobic003G253000 Sobic010G243200 Sobic010G243200 Sobic006G141500--Sobic010G243200 Sobic002G282400 Sobic002G282400 Sobic006G141500--Sobic002G282400 Sobic006G141500--Sobic002G218000 Sobic004G300900 Sobic004G300900 Sobic006G141500--Sobic004G300900 Sobic003G350300 Sobic003G350300 Sobic006G141500--Sobic003G350300 Sobic006G141500--Sobic008G161800 Sobic006G141500--Sobic004G248800 Sobic002G046100 Sobic002G046100 Sobic006G141500--Sobic002G046100 Sobic003G248600 Sobic003G248600 Sobic003G220600--Sobic003G248600 Sobic003G220600--Sobic002G202300 Sobic003G220600--Sobic003G253000 Sobic003G220600--Sobic003G115800 Sobic007G059900 Sobic007G059900 Sobic003G220600--Sobic007G059900 Sobic003G220600--Sobic004G293700 Sobic003G220600--Sobic004G300900 Sobic003G367451 Sobic003G367451 Sobic003G220600--Sobic003G367451 Sobic003G220600--Sobic009G146100
Octagon: transcription factors


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