Gene annotation
Transcriptome id Sobic.010G234600.1
Synonym Sb10g027660
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
wound induced protein, putative, expressed
UniProt C5Z885
Pfam PF12609
Panther DB PTHR33090 PTHR33090:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10270 : Wound-responsive family protein
RAP-DB (Rice) LOC_Os06g46970.1 : wound induced protein, putative, expressed
MaizeGDB (Corn) Zm00025a018162 , Zm00025a034849
Brachypodium KQK17212 , KQJ84831
Barley HORVU2Hr1G108780.1 , HORVU7Hr1G101580.2 , HORVU2Hr1G108730.1 , HORVU7Hr1G101580.1
Wheat TraesCS7B02G348300 , TraesCS7B02G348900 , TraesCS7A02G449200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G234700 expressed protein -
2 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
3 Sobic.001G077700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
5 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
6 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
7 Sobic.006G231332 - -
8 Sobic.009G071800 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
9 Sobic.002G248100 expressed protein -
10 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
11 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
13 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
14 Sobic.004G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@activator of 90 kDa heat shock protein ATPase homolog, putative, expressed -
15 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
16 Sobic.004G199300 hypoxia-responsive family protein, putative, expressed -
17 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
18 Sobic.002G282300 expressed protein -
19 Sobic.010G246000 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.009G255500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase


Gene co-expression network
sample Sobic010G234600 Sobic010G234600 Sobic010G234700 Sobic010G234700 Sobic010G234600--Sobic010G234700 Sobic008G177800 Sobic008G177800 Sobic010G234600--Sobic008G177800 Sobic001G077700 Sobic001G077700 Sobic010G234600--Sobic001G077700 Sobic006G231100 Sobic006G231100 Sobic010G234600--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic010G234600--Sobic002G294700 Sobic002G415600 Sobic002G415600 Sobic010G234600--Sobic002G415600 Sobic006G231332 Sobic006G231332 Sobic010G234600--Sobic006G231332 Sobic009G071800 Sobic009G071800 Sobic010G234600--Sobic009G071800 Sobic002G248100 Sobic002G248100 Sobic010G234600--Sobic002G248100 Sobic010G234700--Sobic010G234600 Sobic010G234700--Sobic002G415600 Sobic004G199300 Sobic004G199300 Sobic010G234700--Sobic004G199300 Sobic010G234700--Sobic001G077700 Sobic010G217800 Sobic010G217800 Sobic010G234700--Sobic010G217800 Sobic006G230900 Sobic006G230900 Sobic010G234700--Sobic006G230900 Sobic010G234700--Sobic008G177800 Sobic003G123600 Sobic003G123600 Sobic010G234700--Sobic003G123600 Sobic006G190500 Sobic006G190500 Sobic010G234700--Sobic006G190500 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic008G177800--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic008G177800--Sobic004G286600 Sobic008G177800--Sobic002G415600 Sobic008G177800--Sobic010G217800 Sobic009G255500 Sobic009G255500 Sobic008G177800--Sobic009G255500 Sobic008G177800--Sobic006G230900 Sobic008G177800--Sobic001G077700 Sobic001G077700--Sobic009G071800 Sobic001G077700--Sobic010G234600 Sobic002G203000 Sobic002G203000 Sobic001G077700--Sobic002G203000 Sobic001G077700--Sobic002G248100 Sobic001G077700--Sobic002G294700 Sobic001G077700--Sobic008G177800 Sobic001G077700--Sobic004G286600 Sobic001G077700--Sobic010G234700 Sobic001G489600 Sobic001G489600 Sobic001G077700--Sobic001G489600 Sobic006G231100--Sobic008G177800 Sobic006G231100--Sobic006G230900 Sobic006G231200 Sobic006G231200 Sobic006G231100--Sobic006G231200 Sobic006G231100--Sobic010G217800 Sobic006G231100--Sobic002G415600 Sobic006G231100--Sobic010G234600 Sobic006G231100--Sobic004G286600 Sobic006G231100--Sobic002G294700 Sobic002G282300 Sobic002G282300 Sobic006G231100--Sobic002G282300 Sobic002G294700--Sobic008G177800 Sobic002G294700--Sobic010G234600 Sobic002G294700--Sobic006G231100 Sobic002G374100 Sobic002G374100 Sobic002G294700--Sobic002G374100 Sobic002G294700--Sobic004G286600 Sobic002G294700--Sobic001G077700 Sobic010G246000 Sobic010G246000 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500 Sobic002G415600--Sobic010G217800 Sobic002G415600--Sobic003G123600 Sobic002G415600--Sobic006G230900 Sobic003G144700 Sobic003G144700 Sobic002G415600--Sobic003G144700 Sobic002G415600--Sobic010G234700 Sobic002G415600--Sobic006G190500 Sobic002G415600--Sobic006G231100 Sobic002G415600--Sobic008G177800 Sobic002G415600--Sobic010G234600 Sobic006G231332--Sobic010G234600 Sobic006G231332--Sobic002G415600 Sobic006G231332--Sobic006G231100 Sobic006G231332--Sobic006G231200 Sobic006G231332--Sobic008G177800 Sobic006G231332--Sobic010G217800 Sobic009G111200 Sobic009G111200 Sobic006G231332--Sobic009G111200 Sobic006G231332--Sobic006G230900 Sobic001G424200 Sobic001G424200 Sobic006G231332--Sobic001G424200 Sobic009G071800--Sobic001G077700 Sobic009G071800--Sobic002G203000 Sobic009G071800--Sobic010G234600 Sobic009G071800--Sobic002G248100 Sobic009G071800--Sobic002G294700 Sobic010G076700 Sobic010G076700 Sobic009G071800--Sobic010G076700 Sobic001G398500 Sobic001G398500 Sobic009G071800--Sobic001G398500 Sobic001G473900 Sobic001G473900 Sobic009G071800--Sobic001G473900 Sobic006G095600 Sobic006G095600 Sobic009G071800--Sobic006G095600 Sobic002G248100--Sobic001G077700 Sobic002G248100--Sobic008G177800 Sobic002G248100--Sobic010G234600 Sobic002G248100--Sobic002G294700 Sobic002G248100--Sobic009G071800 Sobic002G248100--Sobic004G286600 Sobic002G248100--Sobic002G203000 Sobic002G248100--Sobic009G255500 Sobic002G248100--Sobic006G231100
Octagon: transcription factors


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