Gene annotation
Transcriptome id Sobic.009G253800.1
Synonym Sb09g030430
Functional annotation aspartic proteinase, putative, expressed
UniProt A0A1B6PAB4 , A0A120GUX1
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF355
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G01300 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os05g51220.1 : aspartic proteinase, putative, expressed
MaizeGDB (Corn) Zm00025a028616
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G253800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G294500 expansin precursor, putative, expressed -
2 Sobic.004G190200 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
3 Sobic.009G007500 DNA binding protein, putative, expressed -
4 Sobic.007G091200 wax synthase isoform 1, putative, expressed -
5 Sobic.001G518700 DEF8 - Defensin and Defensin-like DEFL family, expressed -
6 Sobic.002G141450 "TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054) -
7 Sobic.001G170500 expressed protein -
8 Sobic.008G088450 - -
9 Sobic.007G023600 ATP binding protein, putative, expressed -
10 Sobic.010G118200 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
11 Sobic.008G088881 - -
12 Sobic.009G033500 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.009G039900 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
14 Sobic.002G345400 DEF1 - Defensin and Defensin-like DEFL family, expressed -
15 Sobic.006G062700 transferase family protein, putative, expressed -
16 Sobic.007G205200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.005G102451 - -
18 Sobic.003G024700 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G096500 phosphoesterase, putative, expressed K08073: bifunctional polynucleotide phosphatase/kinase
20 Sobic.001G328900 expressed protein -


Gene co-expression network
sample Sobic009G253800 Sobic009G253800 Sobic004G294500 Sobic004G294500 Sobic009G253800--Sobic004G294500 Sobic004G190200 Sobic004G190200 Sobic009G253800--Sobic004G190200 Sobic009G007500 Sobic009G007500 Sobic009G253800--Sobic009G007500 Sobic007G091200 Sobic007G091200 Sobic009G253800--Sobic007G091200 Sobic001G518700 Sobic001G518700 Sobic009G253800--Sobic001G518700 Sobic002G141450 Sobic002G141450 Sobic009G253800--Sobic002G141450 Sobic001G170500 Sobic001G170500 Sobic009G253800--Sobic001G170500 Sobic008G088450 Sobic008G088450 Sobic009G253800--Sobic008G088450 Sobic007G023600 Sobic007G023600 Sobic009G253800--Sobic007G023600 Sobic004G294500--Sobic009G007500 Sobic004G294500--Sobic001G518700 Sobic004G294500--Sobic008G088450 Sobic008G088881 Sobic008G088881 Sobic004G294500--Sobic008G088881 Sobic004G294500--Sobic009G253800 Sobic006G062700 Sobic006G062700 Sobic004G294500--Sobic006G062700 Sobic001G112250 Sobic001G112250 Sobic004G294500--Sobic001G112250 Sobic003G024700 Sobic003G024700 Sobic004G294500--Sobic003G024700 Sobic008G103066 Sobic008G103066 Sobic004G294500--Sobic008G103066 Sobic006G121700 Sobic006G121700 Sobic004G190200--Sobic006G121700 Sobic001G243666 Sobic001G243666 Sobic004G190200--Sobic001G243666 Sobic004G190200--Sobic009G253800 Sobic004G190200--Sobic004G294500 Sobic010G164100 Sobic010G164100 Sobic004G190200--Sobic010G164100 Sobic009G191801 Sobic009G191801 Sobic004G190200--Sobic009G191801 Sobic004G190200--Sobic002G141450 Sobic007G075301 Sobic007G075301 Sobic004G190200--Sobic007G075301 Sobic004G190200--Sobic001G518700 Sobic009G007500--Sobic008G088450 Sobic009G007500--Sobic004G294500 Sobic009G007500--Sobic001G518700 Sobic009G007500--Sobic006G062700 Sobic009G007500--Sobic008G103066 Sobic009G007500--Sobic001G112250 Sobic001G249233 Sobic001G249233 Sobic009G007500--Sobic001G249233 Sobic005G174900 Sobic005G174900 Sobic009G007500--Sobic005G174900 Sobic009G007500--Sobic003G024700 Sobic009G033500 Sobic009G033500 Sobic007G091200--Sobic009G033500 Sobic007G091200--Sobic001G518700 Sobic007G091200--Sobic009G007500 Sobic007G091200--Sobic004G294500 Sobic003G189466 Sobic003G189466 Sobic007G091200--Sobic003G189466 Sobic008G081700 Sobic008G081700 Sobic007G091200--Sobic008G081700 Sobic007G091200--Sobic008G088450 Sobic010G118200 Sobic010G118200 Sobic007G091200--Sobic010G118200 Sobic007G091200--Sobic009G253800 Sobic001G518700--Sobic009G007500 Sobic001G518700--Sobic004G294500 Sobic001G518700--Sobic001G112250 Sobic001G518700--Sobic008G088450 Sobic001G518700--Sobic008G103066 Sobic001G518700--Sobic007G091200 Sobic003G156100 Sobic003G156100 Sobic001G518700--Sobic003G156100 Sobic002G077600 Sobic002G077600 Sobic001G518700--Sobic002G077600 Sobic007G070700 Sobic007G070700 Sobic001G518700--Sobic007G070700 Sobic010G274200 Sobic010G274200 Sobic002G141450--Sobic010G274200 Sobic002G141450--Sobic004G294500 Sobic009G040100 Sobic009G040100 Sobic002G141450--Sobic009G040100 Sobic002G141450--Sobic009G007500 Sobic002G141450--Sobic009G253800 Sobic002G141450--Sobic004G190200 Sobic005G116000 Sobic005G116000 Sobic002G141450--Sobic005G116000 Sobic002G141450--Sobic010G164100 Sobic005G051700 Sobic005G051700 Sobic002G141450--Sobic005G051700 Sobic009G025100 Sobic009G025100 Sobic001G170500--Sobic009G025100 Sobic001G170500--Sobic009G007500 Sobic001G170500--Sobic008G088450 Sobic001G170500--Sobic010G118200 Sobic001G170500--Sobic009G253800 Sobic009G227000 Sobic009G227000 Sobic001G170500--Sobic009G227000 Sobic001G170500--Sobic004G294500 Sobic001G170500--Sobic003G024700 Sobic001G170500--Sobic001G518700 Sobic008G088450--Sobic009G007500 Sobic008G088450--Sobic006G062700 Sobic010G109700 Sobic010G109700 Sobic008G088450--Sobic010G109700 Sobic005G056100 Sobic005G056100 Sobic008G088450--Sobic005G056100 Sobic007G025300 Sobic007G025300 Sobic008G088450--Sobic007G025300 Sobic008G081000 Sobic008G081000 Sobic008G088450--Sobic008G081000 Sobic008G088450--Sobic001G249233 Sobic008G088450--Sobic008G103066 Sobic010G200400 Sobic010G200400 Sobic008G088450--Sobic010G200400 Sobic007G023600--Sobic009G253800 Sobic006G261200 Sobic006G261200 Sobic007G023600--Sobic006G261200 Sobic003G402100 Sobic003G402100 Sobic007G023600--Sobic003G402100 Sobic007G023600--Sobic004G190200 Sobic007G023600--Sobic010G118200 Sobic007G023600--Sobic001G170500 Sobic007G023600--Sobic007G091200 Sobic004G250600 Sobic004G250600 Sobic007G023600--Sobic004G250600 Sobic007G023600--Sobic004G294500
Octagon: transcription factors


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