Gene annotation
Transcriptome id Sobic.009G155200.1
Synonym Sb09g021850, WIP4
Functional annotation ZOS5-08 - C2H2 zinc finger protein, expressed
UniProt C5YYT0 , Q9XEQ7
Pfam -
Panther DB PTHR10593 PTHR10593:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57670 : C2H2-type zinc finger family protein
RAP-DB (Rice) LOC_Os05g37190.1 : ZOS5-08 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a037244 , Zm00025a046409 , Zm00025a033793 , Zm00025a051571 , Zm00025a043815 , Zm00025a026771 , Zm00025a013702 , Zm00025a047434 , Zm00025a005046 , Zm00025a042128
Brachypodium KQK10684 , KQK17682 , KQJ89685 , KQK06003 , KQJ90731 , KQJ98896
Barley -
Wheat TraesCS1A02G276800 , TraesCS7B02G304000 , TraesCS7D02G242600 , TraesCS5D02G179700 , TraesCS3D02G364800 , TraesCS3B02G404000 , TraesCS1D02G276200 , TraesCS5D02G270700 , TraesCS3A02G371700 , TraesCS7A02G404400 , TraesCS5B02G262400 , TraesCS7D02G397800 , TraesCS1B02G285900 , TraesCS7B02G147400
Populus PNT46666


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G171000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
2 Sobic.001G119000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.001G054400 expressed protein -
4 Sobic.002G359300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ZOS7-07 - C2H2 zinc finger protein, expressed -
5 Sobic.008G111100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
6 Sobic.009G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
8 Sobic.009G036700 EGG APPARATUS-1, putative, expressed -
9 Sobic.001G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAC domain-containing protein 67, putative, expressed -
10 Sobic.002G195900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.003G429300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NADPH quinone oxidoreductase, putative, expressed -
12 Sobic.004G147900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
13 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
14 Sobic.002G222800 galactosyltransferase, putative, expressed -
15 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
17 Sobic.001G206400 fiber protein Fb34, putative, expressed -
18 Sobic.004G195300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.001G281400 expressed protein -


Gene co-expression network
sample Sobic009G155200 Sobic009G155200 Sobic007G171000 Sobic007G171000 Sobic009G155200--Sobic007G171000 Sobic001G119000 Sobic001G119000 Sobic009G155200--Sobic001G119000 Sobic001G054400 Sobic001G054400 Sobic009G155200--Sobic001G054400 Sobic002G359300 Sobic002G359300 Sobic009G155200--Sobic002G359300 Sobic008G111100 Sobic008G111100 Sobic009G155200--Sobic008G111100 Sobic009G177800 Sobic009G177800 Sobic009G155200--Sobic009G177800 Sobic005G103300 Sobic005G103300 Sobic009G155200--Sobic005G103300 Sobic009G036700 Sobic009G036700 Sobic009G155200--Sobic009G036700 Sobic001G040200 Sobic001G040200 Sobic009G155200--Sobic001G040200 Sobic007G171000--Sobic009G155200 Sobic002G195900 Sobic002G195900 Sobic007G171000--Sobic002G195900 Sobic003G429300 Sobic003G429300 Sobic007G171000--Sobic003G429300 Sobic007G171000--Sobic001G119000 Sobic007G171000--Sobic009G177800 Sobic007G171000--Sobic002G359300 Sobic002G046100 Sobic002G046100 Sobic007G171000--Sobic002G046100 Sobic007G171000--Sobic008G111100 Sobic007G137700 Sobic007G137700 Sobic007G171000--Sobic007G137700 Sobic001G119100 Sobic001G119100 Sobic001G119000--Sobic001G119100 Sobic005G091500 Sobic005G091500 Sobic001G119000--Sobic005G091500 Sobic002G183200 Sobic002G183200 Sobic001G119000--Sobic002G183200 Sobic002G245100 Sobic002G245100 Sobic001G119000--Sobic002G245100 Sobic001G252300 Sobic001G252300 Sobic001G119000--Sobic001G252300 Sobic002G055600 Sobic002G055600 Sobic001G119000--Sobic002G055600 Sobic004G189400 Sobic004G189400 Sobic001G119000--Sobic004G189400 Sobic004G166700 Sobic004G166700 Sobic001G119000--Sobic004G166700 Sobic001G389000 Sobic001G389000 Sobic001G119000--Sobic001G389000 Sobic001G054400--Sobic009G155200 Sobic001G054400--Sobic001G119000 Sobic003G423500 Sobic003G423500 Sobic001G054400--Sobic003G423500 Sobic004G195300 Sobic004G195300 Sobic001G054400--Sobic004G195300 Sobic001G054400--Sobic009G177800 Sobic001G054400--Sobic007G171000 Sobic001G054400--Sobic002G359300 Sobic003G035700 Sobic003G035700 Sobic001G054400--Sobic003G035700 Sobic001G054400--Sobic001G119100 Sobic002G359300--Sobic001G040200 Sobic006G179500 Sobic006G179500 Sobic002G359300--Sobic006G179500 Sobic002G140300 Sobic002G140300 Sobic002G359300--Sobic002G140300 Sobic006G183400 Sobic006G183400 Sobic002G359300--Sobic006G183400 Sobic002G359300--Sobic002G195900 Sobic003G430400 Sobic003G430400 Sobic002G359300--Sobic003G430400 Sobic003G264500 Sobic003G264500 Sobic002G359300--Sobic003G264500 Sobic006G089300 Sobic006G089300 Sobic002G359300--Sobic006G089300 Sobic009G183300 Sobic009G183300 Sobic002G359300--Sobic009G183300 Sobic008G111100--Sobic009G177800 Sobic008G111100--Sobic003G429300 Sobic004G307000 Sobic004G307000 Sobic008G111100--Sobic004G307000 Sobic003G019200 Sobic003G019200 Sobic008G111100--Sobic003G019200 Sobic008G111100--Sobic009G155200 Sobic008G111100--Sobic007G171000 Sobic008G111100--Sobic002G195900 Sobic010G224200 Sobic010G224200 Sobic008G111100--Sobic010G224200 Sobic002G423300 Sobic002G423300 Sobic008G111100--Sobic002G423300 Sobic009G177800--Sobic002G183200 Sobic009G177800--Sobic004G307000 Sobic009G177800--Sobic008G111100 Sobic009G177800--Sobic001G119100 Sobic009G177800--Sobic002G195900 Sobic009G177800--Sobic001G119000 Sobic006G173900 Sobic006G173900 Sobic009G177800--Sobic006G173900 Sobic004G167800 Sobic004G167800 Sobic009G177800--Sobic004G167800 Sobic009G177800--Sobic007G171000 Sobic002G414600 Sobic002G414600 Sobic005G103300--Sobic002G414600 Sobic005G103500 Sobic005G103500 Sobic005G103300--Sobic005G103500 Sobic003G334600 Sobic003G334600 Sobic005G103300--Sobic003G334600 Sobic003G387000 Sobic003G387000 Sobic005G103300--Sobic003G387000 Sobic005G103300--Sobic001G252300 Sobic001G097600 Sobic001G097600 Sobic005G103300--Sobic001G097600 Sobic005G103300--Sobic001G119000 Sobic002G082600 Sobic002G082600 Sobic005G103300--Sobic002G082600 Sobic005G103300--Sobic002G359300 Sobic003G285800 Sobic003G285800 Sobic009G036700--Sobic003G285800 Sobic009G023200 Sobic009G023200 Sobic009G036700--Sobic009G023200 Sobic009G036700--Sobic002G046100 Sobic010G052700 Sobic010G052700 Sobic009G036700--Sobic010G052700 Sobic008G185400 Sobic008G185400 Sobic009G036700--Sobic008G185400 Sobic001G477300 Sobic001G477300 Sobic009G036700--Sobic001G477300 Sobic002G187500 Sobic002G187500 Sobic009G036700--Sobic002G187500 Sobic004G192100 Sobic004G192100 Sobic009G036700--Sobic004G192100 Sobic009G036700--Sobic001G252300 Sobic001G040200--Sobic002G140300 Sobic001G040200--Sobic002G359300 Sobic003G324400 Sobic003G324400 Sobic001G040200--Sobic003G324400 Sobic001G040200--Sobic003G430400 Sobic001G538866 Sobic001G538866 Sobic001G040200--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic001G040200--Sobic009G036100 Sobic003G158500 Sobic003G158500 Sobic001G040200--Sobic003G158500 Sobic001G040200--Sobic006G179500 Sobic002G245800 Sobic002G245800 Sobic001G040200--Sobic002G245800
Octagon: transcription factors


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