Gene annotation
Transcriptome id Sobic.009G077600.2,Sobic.009G077600.1
Synonym Sb09g006500, MNS3
Functional annotation glycosyl hydrolase family 47 domain contain protein, expressed
UniProt C5YUN6
Pfam PF01532
Panther DB PTHR11742 PTHR11742:SF7
NCBI CDD -
KEGG Orthology K01230; MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
Gene Ontology GO:0016020; membrane GO:0005509calcium ion binding GO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activity


Orthologs (automatic annotation)
TAIR AT1G30000 : alpha-mannosidase 3
RAP-DB (Rice) LOC_Os05g11850.1 : glycosyl hydrolase family 47 domain contain protein, expressed
MaizeGDB (Corn) Zm00025a037599
Brachypodium PNT71620 , KQK07052 , KQK07051
Barley HORVU1Hr1G029490.20 , HORVU1Hr1G029490.21 , HORVU1Hr1G029490.22 , HORVU1Hr1G029490.23 , HORVU1Hr1G029490.15 , HORVU1Hr1G029490.14 , HORVU1Hr1G029490.17 , HORVU1Hr1G029490.16 , HORVU1Hr1G029490.11 , HORVU1Hr1G029490.10 , HORVU1Hr1G029490.13 , HORVU1Hr1G029490.12 , HORVU1Hr1G029490.19 , HORVU1Hr1G029490.18 , HORVU1Hr1G029490.1 , HORVU1Hr1G029490.3 , HORVU1Hr1G029490.2 , HORVU1Hr1G029490.5 , HORVU1Hr1G029490.4 , HORVU1Hr1G029490.7 , HORVU1Hr1G029490.6 , HORVU1Hr1G029490.9 , HORVU1Hr1G029490.8
Wheat TraesCS1B02G145500 , TraesCS1B02G145500 , TraesCS1D02G127200 , TraesCS1D02G127200 , TraesCS1A02G126300 , TraesCS1A02G126300 , TraesCS1A02G126300
Populus -


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cDNA sequences
Sobic.009G077600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
2 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
3 Sobic.006G260500 expressed protein -
4 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
5 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
6 Sobic.006G239400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11366: USP22_27_51, ubiquitin carboxyl-terminal hydrolase 22/27/51
7 Sobic.007G005500 ECT protein, putative, expressed -
8 Sobic.003G050900 dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed K03845: alpha-1,3-mannosyltransferase
9 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
10 Sobic.001G117800 coatomer alpha subunit, putative, expressed K05236: COPA, coatomer subunit alpha
11 Sobic.008G085700 exocyst complex component 5, putative, expressed -
12 Sobic.001G023100 ACBP4, putative, expressed -
13 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
14 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
15 Sobic.003G284000 CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
16 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
17 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
18 Sobic.001G211900 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase
19 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
20 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit


Gene co-expression network
sample Sobic009G077600 Sobic009G077600 Sobic003G209200 Sobic003G209200 Sobic009G077600--Sobic003G209200 Sobic008G055900 Sobic008G055900 Sobic009G077600--Sobic008G055900 Sobic006G260500 Sobic006G260500 Sobic009G077600--Sobic006G260500 Sobic004G207900 Sobic004G207900 Sobic009G077600--Sobic004G207900 Sobic004G100200 Sobic004G100200 Sobic009G077600--Sobic004G100200 Sobic006G239400 Sobic006G239400 Sobic009G077600--Sobic006G239400 Sobic007G005500 Sobic007G005500 Sobic009G077600--Sobic007G005500 Sobic003G050900 Sobic003G050900 Sobic009G077600--Sobic003G050900 Sobic010G223300 Sobic010G223300 Sobic009G077600--Sobic010G223300 Sobic003G209200--Sobic007G005500 Sobic003G209200--Sobic006G260500 Sobic006G077300 Sobic006G077300 Sobic003G209200--Sobic006G077300 Sobic006G021700 Sobic006G021700 Sobic003G209200--Sobic006G021700 Sobic005G062200 Sobic005G062200 Sobic003G209200--Sobic005G062200 Sobic004G241900 Sobic004G241900 Sobic003G209200--Sobic004G241900 Sobic004G261600 Sobic004G261600 Sobic003G209200--Sobic004G261600 Sobic005G110499 Sobic005G110499 Sobic003G209200--Sobic005G110499 Sobic003G209200--Sobic009G077600 Sobic002G020700 Sobic002G020700 Sobic008G055900--Sobic002G020700 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic010G020400 Sobic010G020400 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G085700 Sobic008G085700 Sobic008G055900--Sobic008G085700 Sobic006G056200 Sobic006G056200 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600 Sobic003G114400 Sobic003G114400 Sobic006G260500--Sobic003G114400 Sobic006G260500--Sobic006G077300 Sobic006G260500--Sobic004G241900 Sobic006G260500--Sobic003G209200 Sobic006G260500--Sobic010G223300 Sobic006G260500--Sobic005G062200 Sobic006G260500--Sobic007G005500 Sobic007G075500 Sobic007G075500 Sobic006G260500--Sobic007G075500 Sobic006G260500--Sobic006G021700 Sobic001G161700 Sobic001G161700 Sobic004G207900--Sobic001G161700 Sobic004G207900--Sobic009G077600 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic004G078700 Sobic004G078700 Sobic004G100200--Sobic004G078700 Sobic004G100200--Sobic007G005500 Sobic004G100200--Sobic006G260500 Sobic004G100200--Sobic003G209200 Sobic004G100200--Sobic009G077600 Sobic010G169900 Sobic010G169900 Sobic004G100200--Sobic010G169900 Sobic004G100200--Sobic003G346400 Sobic004G100200--Sobic004G207900 Sobic004G100200--Sobic004G241900 Sobic006G239400--Sobic003G209200 Sobic006G239400--Sobic009G077600 Sobic009G128500 Sobic009G128500 Sobic006G239400--Sobic009G128500 Sobic006G239400--Sobic007G005500 Sobic006G239400--Sobic006G077300 Sobic006G203300 Sobic006G203300 Sobic006G239400--Sobic006G203300 Sobic010G223400 Sobic010G223400 Sobic006G239400--Sobic010G223400 Sobic006G239400--Sobic006G021700 Sobic001G308400 Sobic001G308400 Sobic006G239400--Sobic001G308400 Sobic007G005500--Sobic003G209200 Sobic007G005500--Sobic004G241900 Sobic007G005500--Sobic005G062200 Sobic007G005500--Sobic006G260500 Sobic007G005500--Sobic006G021700 Sobic007G005500--Sobic010G169900 Sobic010G000800 Sobic010G000800 Sobic007G005500--Sobic010G000800 Sobic007G005500--Sobic004G261600 Sobic007G005500--Sobic006G077300 Sobic003G050900--Sobic005G110499 Sobic009G003700 Sobic009G003700 Sobic003G050900--Sobic009G003700 Sobic003G227100 Sobic003G227100 Sobic003G050900--Sobic003G227100 Sobic003G284000 Sobic003G284000 Sobic003G050900--Sobic003G284000 Sobic003G050900--Sobic003G209200 Sobic003G050900--Sobic009G077600 Sobic003G050900--Sobic008G055900 Sobic006G166200 Sobic006G166200 Sobic003G050900--Sobic006G166200 Sobic003G023300 Sobic003G023300 Sobic003G050900--Sobic003G023300 Sobic010G223300--Sobic008G055900 Sobic001G449900 Sobic001G449900 Sobic010G223300--Sobic001G449900 Sobic010G223300--Sobic002G020700 Sobic003G338500 Sobic003G338500 Sobic010G223300--Sobic003G338500 Sobic010G223300--Sobic006G260500 Sobic004G092500 Sobic004G092500 Sobic010G223300--Sobic004G092500 Sobic010G223300--Sobic010G020400 Sobic002G008800 Sobic002G008800 Sobic010G223300--Sobic002G008800 Sobic006G180000 Sobic006G180000 Sobic010G223300--Sobic006G180000
Octagon: transcription factors


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