Gene annotation
Transcriptome id Sobic.009G001100.1
Synonym Sb09g000310
Functional annotation expressed protein
UniProt C5YXX9
Pfam -
Panther DB PTHR33384 PTHR33384:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68490 : -
RAP-DB (Rice) LOC_Os05g01210.1 : expressed protein
MaizeGDB (Corn) Zm00025a041016 , Zm00025a038299
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G001100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G025800 dual specificity protein phosphatase, putative, expressed K14819: DUSP12, dual specificity phosphatase 12
2 Sobic.007G191700 expressed protein K08507: unconventional SNARE in the endoplasmic reticulum protein 1
3 Sobic.003G121300 expressed protein K15170: mediator of RNA polymerase II transcription subunit 27
4 Sobic.001G472100 frigida, putative, expressed -
5 Sobic.010G232900 surp module family protein, putative, expressed -
6 Sobic.001G042200 ATP/GTP/Ca++ binding protein, putative, expressed K07870: RHOT1, mitochondrial Rho GTPase 1
7 Sobic.006G049100 expressed protein -
8 Sobic.006G248500 expressed protein -
9 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
10 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2
11 Sobic.001G038100 protein kinase PKN/PRK1, effector, putative, expressed -
12 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
13 Sobic.009G195200 ESP1, putative, expressed -
14 Sobic.001G469800 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
15 Sobic.007G027700 expressed protein -
16 Sobic.006G183000 RING zinc finger protein, putative, expressed -
17 Sobic.001G526300 WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
18 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
19 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
20 Sobic.007G119900 signal recognition particle receptor subunit beta, putative, expressed K12272: SRPRB, signal recognition particle receptor subunit beta


Gene co-expression network
sample Sobic009G001100 Sobic009G001100 Sobic005G025800 Sobic005G025800 Sobic009G001100--Sobic005G025800 Sobic007G191700 Sobic007G191700 Sobic009G001100--Sobic007G191700 Sobic003G121300 Sobic003G121300 Sobic009G001100--Sobic003G121300 Sobic001G472100 Sobic001G472100 Sobic009G001100--Sobic001G472100 Sobic010G232900 Sobic010G232900 Sobic009G001100--Sobic010G232900 Sobic001G042200 Sobic001G042200 Sobic009G001100--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic009G001100--Sobic006G049100 Sobic006G248500 Sobic006G248500 Sobic009G001100--Sobic006G248500 Sobic010G237900 Sobic010G237900 Sobic009G001100--Sobic010G237900 Sobic007G027700 Sobic007G027700 Sobic005G025800--Sobic007G027700 Sobic001G226000 Sobic001G226000 Sobic005G025800--Sobic001G226000 Sobic005G025800--Sobic009G001100 Sobic003G253400 Sobic003G253400 Sobic005G025800--Sobic003G253400 Sobic007G119900 Sobic007G119900 Sobic005G025800--Sobic007G119900 Sobic004G133700 Sobic004G133700 Sobic005G025800--Sobic004G133700 Sobic005G025800--Sobic007G191700 Sobic001G469800 Sobic001G469800 Sobic005G025800--Sobic001G469800 Sobic006G267300 Sobic006G267300 Sobic005G025800--Sobic006G267300 Sobic007G191700--Sobic010G237900 Sobic007G091600 Sobic007G091600 Sobic007G191700--Sobic007G091600 Sobic004G129300 Sobic004G129300 Sobic007G191700--Sobic004G129300 Sobic001G395100 Sobic001G395100 Sobic007G191700--Sobic001G395100 Sobic005G079800 Sobic005G079800 Sobic007G191700--Sobic005G079800 Sobic010G279700 Sobic010G279700 Sobic007G191700--Sobic010G279700 Sobic006G118700 Sobic006G118700 Sobic007G191700--Sobic006G118700 Sobic007G041300 Sobic007G041300 Sobic007G191700--Sobic007G041300 Sobic001G473600 Sobic001G473600 Sobic007G191700--Sobic001G473600 Sobic001G114500 Sobic001G114500 Sobic003G121300--Sobic001G114500 Sobic003G121300--Sobic010G237900 Sobic010G029900 Sobic010G029900 Sobic003G121300--Sobic010G029900 Sobic005G160400 Sobic005G160400 Sobic003G121300--Sobic005G160400 Sobic003G132000 Sobic003G132000 Sobic003G121300--Sobic003G132000 Sobic001G487100 Sobic001G487100 Sobic003G121300--Sobic001G487100 Sobic004G156800 Sobic004G156800 Sobic003G121300--Sobic004G156800 Sobic002G361400 Sobic002G361400 Sobic003G121300--Sobic002G361400 Sobic009G164000 Sobic009G164000 Sobic003G121300--Sobic009G164000 Sobic005G040900 Sobic005G040900 Sobic001G472100--Sobic005G040900 Sobic009G059400 Sobic009G059400 Sobic001G472100--Sobic009G059400 Sobic005G198200 Sobic005G198200 Sobic001G472100--Sobic005G198200 Sobic009G125000 Sobic009G125000 Sobic001G472100--Sobic009G125000 Sobic008G058800 Sobic008G058800 Sobic001G472100--Sobic008G058800 Sobic004G345400 Sobic004G345400 Sobic001G472100--Sobic004G345400 Sobic009G129600 Sobic009G129600 Sobic001G472100--Sobic009G129600 Sobic007G139400 Sobic007G139400 Sobic001G472100--Sobic007G139400 Sobic003G354100 Sobic003G354100 Sobic001G472100--Sobic003G354100 Sobic010G232900--Sobic001G042200 Sobic010G232900--Sobic007G027700 Sobic008G127400 Sobic008G127400 Sobic010G232900--Sobic008G127400 Sobic010G239800 Sobic010G239800 Sobic010G232900--Sobic010G239800 Sobic002G280600 Sobic002G280600 Sobic010G232900--Sobic002G280600 Sobic003G187200 Sobic003G187200 Sobic010G232900--Sobic003G187200 Sobic003G006400 Sobic003G006400 Sobic010G232900--Sobic003G006400 Sobic006G204800 Sobic006G204800 Sobic010G232900--Sobic006G204800 Sobic001G526300 Sobic001G526300 Sobic010G232900--Sobic001G526300 Sobic010G077500 Sobic010G077500 Sobic001G042200--Sobic010G077500 Sobic001G042200--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic001G042200--Sobic007G187600 Sobic001G042200--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic001G042200--Sobic007G056500 Sobic003G212900 Sobic003G212900 Sobic001G042200--Sobic003G212900 Sobic007G042900 Sobic007G042900 Sobic001G042200--Sobic007G042900 Sobic009G249700 Sobic009G249700 Sobic001G042200--Sobic009G249700 Sobic006G281700 Sobic006G281700 Sobic001G042200--Sobic006G281700 Sobic006G049100--Sobic010G077500 Sobic006G049100--Sobic001G042200 Sobic006G049100--Sobic001G487100 Sobic006G049100--Sobic007G056500 Sobic001G168900 Sobic001G168900 Sobic006G049100--Sobic001G168900 Sobic006G049100--Sobic004G345400 Sobic006G049100--Sobic007G187600 Sobic006G049100--Sobic003G132000 Sobic006G049100--Sobic001G395100 Sobic006G248500--Sobic001G469800 Sobic002G259800 Sobic002G259800 Sobic006G248500--Sobic002G259800 Sobic003G433500 Sobic003G433500 Sobic006G248500--Sobic003G433500 Sobic009G151200 Sobic009G151200 Sobic006G248500--Sobic009G151200 Sobic006G248500--Sobic008G058800 Sobic004G013600 Sobic004G013600 Sobic006G248500--Sobic004G013600 Sobic007G026000 Sobic007G026000 Sobic006G248500--Sobic007G026000 Sobic004G347100 Sobic004G347100 Sobic006G248500--Sobic004G347100 Sobic009G044900 Sobic009G044900 Sobic006G248500--Sobic009G044900 Sobic010G237900--Sobic004G129300 Sobic010G237900--Sobic007G191700 Sobic001G002600 Sobic001G002600 Sobic010G237900--Sobic001G002600 Sobic007G084100 Sobic007G084100 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic006G014100 Sobic006G014100 Sobic010G237900--Sobic006G014100 Sobic010G237900--Sobic003G121300 Sobic010G237900--Sobic004G156800 Sobic010G145800 Sobic010G145800 Sobic010G237900--Sobic010G145800
Octagon: transcription factors


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