Gene annotation
Transcriptome id Sobic.007G070300.1
Synonym Sb07g005560
Functional annotation OsFBL41 - F-box domain and LRR containing protein, expressed
UniProt C5YIE0
Pfam PF12937
Panther DB PTHR24006 PTHR24006:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G05460 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os08g09450.1 : OsFBL41 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G020470.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G205100 helicase, putative, expressed K11136: regulator of telomere elongation helicase 1
2 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
3 Sobic.010G046400 glyoxalase/bleomycin resistance protein/dioxygenase, putative, expressed -
4 Sobic.010G237650 - -
5 Sobic.002G268900 flap endonuclease, putative, expressed K15338: GEN1, flap endonuclease GEN
6 Sobic.004G353400 leucine-rich repeat-containing protein 40, putative, expressed -
7 Sobic.003G028400 OsFBX234 - F-box domain containing protein, expressed -
8 Sobic.001G247200 - -
9 Sobic.008G090300 - -
10 Sobic.007G053400 nuclear matrix protein 1, putative, expressed -
11 Sobic.001G335201 - -
12 Sobic.006G170900 growth regulator related protein, putative, expressed -
13 Sobic.001G100800 mitochondrial carrier protein, putative, expressed -
14 Sobic.008G039000 expressed protein -
15 Sobic.007G139400 OsFBL33 - F-box domain and LRR containing protein, expressed -
16 Sobic.002G380100 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
17 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
18 Sobic.009G108400 CAAX amino terminal protease family protein, putative, expressed K08658: RCE1, prenyl protein peptidase
19 Sobic.002G334600 OsFBX251 - F-box domain containing protein, expressed -
20 Sobic.002G033600 Leucine Rich Repeat family protein, expressed -


Gene co-expression network
sample Sobic007G070300 Sobic007G070300 Sobic003G205100 Sobic003G205100 Sobic007G070300--Sobic003G205100 Sobic009G040800 Sobic009G040800 Sobic007G070300--Sobic009G040800 Sobic010G046400 Sobic010G046400 Sobic007G070300--Sobic010G046400 Sobic010G237650 Sobic010G237650 Sobic007G070300--Sobic010G237650 Sobic002G268900 Sobic002G268900 Sobic007G070300--Sobic002G268900 Sobic004G353400 Sobic004G353400 Sobic007G070300--Sobic004G353400 Sobic003G028400 Sobic003G028400 Sobic007G070300--Sobic003G028400 Sobic001G247200 Sobic001G247200 Sobic007G070300--Sobic001G247200 Sobic008G090300 Sobic008G090300 Sobic007G070300--Sobic008G090300 Sobic003G194800 Sobic003G194800 Sobic003G205100--Sobic003G194800 Sobic001G043200 Sobic001G043200 Sobic003G205100--Sobic001G043200 Sobic001G343000 Sobic001G343000 Sobic003G205100--Sobic001G343000 Sobic007G140100 Sobic007G140100 Sobic003G205100--Sobic007G140100 Sobic001G242300 Sobic001G242300 Sobic003G205100--Sobic001G242300 Sobic009G108400 Sobic009G108400 Sobic003G205100--Sobic009G108400 Sobic009G120400 Sobic009G120400 Sobic003G205100--Sobic009G120400 Sobic003G205100--Sobic007G070300 Sobic003G397100 Sobic003G397100 Sobic003G205100--Sobic003G397100 Sobic010G278600 Sobic010G278600 Sobic009G040800--Sobic010G278600 Sobic006G091000 Sobic006G091000 Sobic009G040800--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic004G246100 Sobic004G246100 Sobic009G040800--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic009G040800--Sobic001G042200 Sobic009G040800--Sobic004G353400 Sobic010G173900 Sobic010G173900 Sobic010G046400--Sobic010G173900 Sobic004G227500 Sobic004G227500 Sobic010G046400--Sobic004G227500 Sobic002G334600 Sobic002G334600 Sobic010G046400--Sobic002G334600 Sobic002G218700 Sobic002G218700 Sobic010G046400--Sobic002G218700 Sobic010G046400--Sobic007G070300 Sobic002G367300 Sobic002G367300 Sobic010G046400--Sobic002G367300 Sobic009G011500 Sobic009G011500 Sobic010G046400--Sobic009G011500 Sobic008G099500 Sobic008G099500 Sobic010G046400--Sobic008G099500 Sobic010G046400--Sobic001G247200 Sobic002G033600 Sobic002G033600 Sobic010G237650--Sobic002G033600 Sobic003G092066 Sobic003G092066 Sobic010G237650--Sobic003G092066 Sobic010G237650--Sobic002G268900 Sobic006G144000 Sobic006G144000 Sobic010G237650--Sobic006G144000 Sobic007G139400 Sobic007G139400 Sobic010G237650--Sobic007G139400 Sobic006G215100 Sobic006G215100 Sobic010G237650--Sobic006G215100 Sobic010G073600 Sobic010G073600 Sobic010G237650--Sobic010G073600 Sobic005G128000 Sobic005G128000 Sobic010G237650--Sobic005G128000 Sobic009G102000 Sobic009G102000 Sobic010G237650--Sobic009G102000 Sobic002G268900--Sobic002G033600 Sobic001G522400 Sobic001G522400 Sobic002G268900--Sobic001G522400 Sobic002G268900--Sobic010G237650 Sobic004G085300 Sobic004G085300 Sobic002G268900--Sobic004G085300 Sobic002G268900--Sobic009G129600 Sobic004G347100 Sobic004G347100 Sobic002G268900--Sobic004G347100 Sobic002G268900--Sobic007G139400 Sobic003G343600 Sobic003G343600 Sobic002G268900--Sobic003G343600 Sobic001G346700 Sobic001G346700 Sobic002G268900--Sobic001G346700 Sobic004G353400--Sobic006G091000 Sobic004G353400--Sobic009G040800 Sobic005G178950 Sobic005G178950 Sobic004G353400--Sobic005G178950 Sobic004G042900 Sobic004G042900 Sobic004G353400--Sobic004G042900 Sobic007G053400 Sobic007G053400 Sobic004G353400--Sobic007G053400 Sobic001G100800 Sobic001G100800 Sobic004G353400--Sobic001G100800 Sobic007G016900 Sobic007G016900 Sobic004G353400--Sobic007G016900 Sobic004G353400--Sobic006G144000 Sobic002G299100 Sobic002G299100 Sobic004G353400--Sobic002G299100 Sobic004G129500 Sobic004G129500 Sobic003G028400--Sobic004G129500 Sobic003G331000 Sobic003G331000 Sobic003G028400--Sobic003G331000 Sobic003G259600 Sobic003G259600 Sobic003G028400--Sobic003G259600 Sobic001G123600 Sobic001G123600 Sobic003G028400--Sobic001G123600 Sobic007G031300 Sobic007G031300 Sobic003G028400--Sobic007G031300 Sobic002G123600 Sobic002G123600 Sobic003G028400--Sobic002G123600 Sobic001G465500 Sobic001G465500 Sobic003G028400--Sobic001G465500 Sobic007G030600 Sobic007G030600 Sobic003G028400--Sobic007G030600 Sobic003G028400--Sobic001G242300 Sobic001G247200--Sobic009G040800 Sobic004G242700 Sobic004G242700 Sobic001G247200--Sobic004G242700 Sobic006G082900 Sobic006G082900 Sobic001G247200--Sobic006G082900 Sobic001G247200--Sobic007G139400 Sobic001G247200--Sobic009G108400 Sobic009G030300 Sobic009G030300 Sobic001G247200--Sobic009G030300 Sobic004G061900 Sobic004G061900 Sobic001G247200--Sobic004G061900 Sobic001G247200--Sobic002G218700 Sobic004G232000 Sobic004G232000 Sobic001G247200--Sobic004G232000 Sobic008G090300--Sobic008G099500 Sobic008G090300--Sobic003G397100 Sobic006G066000 Sobic006G066000 Sobic008G090300--Sobic006G066000 Sobic004G189700 Sobic004G189700 Sobic008G090300--Sobic004G189700 Sobic008G084401 Sobic008G084401 Sobic008G090300--Sobic008G084401 Sobic008G090400 Sobic008G090400 Sobic008G090300--Sobic008G090400 Sobic008G090300--Sobic010G237650 Sobic008G169400 Sobic008G169400 Sobic008G090300--Sobic008G169400 Sobic008G090300--Sobic007G070300
Octagon: transcription factors


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