Gene annotation
Transcriptome id Sobic.007G042400.1,Sobic.007G042400.2
Synonym Sb07g003505
Functional annotation HEAT repeat family protein, putative, expressed
UniProt A0A1Z5R8Y5 , A0A1Z5R839
Pfam PF13251
Panther DB PTHR13366
NCBI CDD KOG4535; HEAT and armadillo repeat-containing protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38120 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os08g05670.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a055191
Brachypodium KQJ95405 , KQJ95406
Barley HORVU7Hr1G071900.18 , HORVU7Hr1G071900.19 , HORVU7Hr1G071900.12 , HORVU7Hr1G071900.13 , HORVU7Hr1G071900.10 , HORVU7Hr1G071900.16 , HORVU7Hr1G071900.17 , HORVU7Hr1G071900.14 , HORVU7Hr1G071900.15 , HORVU7Hr1G071900.11 , HORVU7Hr1G071900.1 , HORVU7Hr1G071900.2 , HORVU7Hr1G071900.3 , HORVU7Hr1G071900.4 , HORVU7Hr1G071900.5 , HORVU7Hr1G071900.6 , HORVU7Hr1G071900.7 , HORVU7Hr1G071900.9 , HORVU7Hr1G071900.43 , HORVU7Hr1G071900.42 , HORVU7Hr1G071900.23 , HORVU7Hr1G071900.22 , HORVU7Hr1G071900.21 , HORVU7Hr1G071900.20 , HORVU7Hr1G071900.27 , HORVU7Hr1G071900.26 , HORVU7Hr1G071900.25 , HORVU7Hr1G071900.24 , HORVU7Hr1G071900.29 , HORVU7Hr1G071900.28 , HORVU7Hr1G071900.30 , HORVU7Hr1G071900.31 , HORVU7Hr1G071900.32 , HORVU7Hr1G071900.33 , HORVU7Hr1G071900.34 , HORVU7Hr1G071900.35 , HORVU7Hr1G071900.36 , HORVU7Hr1G071900.37 , HORVU7Hr1G071900.38 , HORVU7Hr1G071900.39
Wheat TraesCS7D02G298700 , TraesCS7D02G298700 , TraesCS7A02G303300 , TraesCS7A02G303300 , TraesCS7B02G203500 , TraesCS7B02G203500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G444800 expressed protein -
2 Sobic.006G234700 FGGY family of carbohydrate kinases, putative, expressed -
3 Sobic.009G084900 expressed protein -
4 Sobic.003G152400 WD domain containing protein, putative, expressed K17601: WD repeat-containing protein 81
5 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
6 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
7 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
8 Sobic.004G357100 expressed protein -
9 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
10 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
11 Sobic.K028600 expressed protein -
12 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
13 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
14 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
15 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
16 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
17 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
18 Sobic.004G223600 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
19 Sobic.002G397500 SAC3/GANP family protein, expressed -
20 Sobic.010G166400 initiator tRNA phosphoribosyl transferase family protein, putative, expressed K15463: tRNA A64-2'-O-ribosylphosphate transferase


Gene co-expression network
sample Sobic007G042400 Sobic007G042400 Sobic003G444800 Sobic003G444800 Sobic007G042400--Sobic003G444800 Sobic006G234700 Sobic006G234700 Sobic007G042400--Sobic006G234700 Sobic009G084900 Sobic009G084900 Sobic007G042400--Sobic009G084900 Sobic003G152400 Sobic003G152400 Sobic007G042400--Sobic003G152400 Sobic010G059500 Sobic010G059500 Sobic007G042400--Sobic010G059500 Sobic009G247400 Sobic009G247400 Sobic007G042400--Sobic009G247400 Sobic003G059750 Sobic003G059750 Sobic007G042400--Sobic003G059750 Sobic004G357100 Sobic004G357100 Sobic007G042400--Sobic004G357100 Sobic001G311500 Sobic001G311500 Sobic007G042400--Sobic001G311500 SobicK028600 SobicK028600 Sobic003G444800--SobicK028600 Sobic003G444800--Sobic003G059750 Sobic002G103600 Sobic002G103600 Sobic003G444800--Sobic002G103600 Sobic003G444800--Sobic004G357100 Sobic003G444800--Sobic007G042400 Sobic002G112700 Sobic002G112700 Sobic003G444800--Sobic002G112700 Sobic010G279450 Sobic010G279450 Sobic003G444800--Sobic010G279450 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 Sobic004G096400 Sobic004G096400 Sobic006G234700--Sobic004G096400 Sobic006G234700--Sobic010G059500 Sobic009G192300 Sobic009G192300 Sobic006G234700--Sobic009G192300 Sobic006G234700--Sobic007G042400 Sobic006G234700--Sobic003G444800 Sobic001G493200 Sobic001G493200 Sobic006G234700--Sobic001G493200 Sobic006G234700--Sobic009G084900 Sobic001G433800 Sobic001G433800 Sobic006G234700--Sobic001G433800 Sobic002G083500 Sobic002G083500 Sobic006G234700--Sobic002G083500 Sobic009G084900--Sobic010G059500 Sobic003G072200 Sobic003G072200 Sobic009G084900--Sobic003G072200 Sobic009G084900--Sobic001G493200 Sobic009G084900--Sobic001G433800 Sobic009G131300 Sobic009G131300 Sobic009G084900--Sobic009G131300 Sobic002G133300 Sobic002G133300 Sobic009G084900--Sobic002G133300 Sobic006G077200 Sobic006G077200 Sobic009G084900--Sobic006G077200 Sobic008G082500 Sobic008G082500 Sobic009G084900--Sobic008G082500 Sobic004G260100 Sobic004G260100 Sobic009G084900--Sobic004G260100 Sobic003G152400--Sobic004G357100 Sobic003G152400--Sobic007G042400 Sobic002G430300 Sobic002G430300 Sobic003G152400--Sobic002G430300 Sobic004G223600 Sobic004G223600 Sobic003G152400--Sobic004G223600 Sobic008G098300 Sobic008G098300 Sobic003G152400--Sobic008G098300 Sobic003G152400--Sobic009G084900 Sobic002G063900 Sobic002G063900 Sobic003G152400--Sobic002G063900 Sobic004G246100 Sobic004G246100 Sobic003G152400--Sobic004G246100 Sobic001G145400 Sobic001G145400 Sobic003G152400--Sobic001G145400 Sobic010G059500--Sobic009G084900 Sobic010G059500--Sobic009G131300 Sobic001G035200 Sobic001G035200 Sobic010G059500--Sobic001G035200 Sobic010G059500--Sobic004G096400 Sobic010G059500--Sobic006G234700 Sobic010G059500--Sobic001G145400 Sobic010G034100 Sobic010G034100 Sobic010G059500--Sobic010G034100 Sobic010G059500--Sobic006G077200 Sobic010G059500--Sobic001G493200 Sobic009G247400--Sobic001G311500 Sobic009G247400--Sobic010G279450 Sobic009G260500 Sobic009G260500 Sobic009G247400--Sobic009G260500 Sobic004G009600 Sobic004G009600 Sobic009G247400--Sobic004G009600 Sobic001G214600 Sobic001G214600 Sobic009G247400--Sobic001G214600 Sobic001G363500 Sobic001G363500 Sobic009G247400--Sobic001G363500 Sobic001G219600 Sobic001G219600 Sobic009G247400--Sobic001G219600 Sobic002G317200 Sobic002G317200 Sobic009G247400--Sobic002G317200 Sobic004G314000 Sobic004G314000 Sobic009G247400--Sobic004G314000 Sobic007G103600 Sobic007G103600 Sobic003G059750--Sobic007G103600 Sobic005G207500 Sobic005G207500 Sobic003G059750--Sobic005G207500 Sobic005G112300 Sobic005G112300 Sobic003G059750--Sobic005G112300 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G059750--Sobic003G444800 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic002G071500 Sobic002G071500 Sobic003G059750--Sobic002G071500 Sobic004G357100--SobicK028600 Sobic004G357100--Sobic003G444800 Sobic004G357100--Sobic002G063900 Sobic004G357100--Sobic003G152400 Sobic003G043000 Sobic003G043000 Sobic004G357100--Sobic003G043000 Sobic004G265500 Sobic004G265500 Sobic004G357100--Sobic004G265500 Sobic001G308400 Sobic001G308400 Sobic004G357100--Sobic001G308400 Sobic004G357100--Sobic007G042400 Sobic004G357100--Sobic006G234700 Sobic010G139000 Sobic010G139000 Sobic001G311500--Sobic010G139000 Sobic001G311500--Sobic009G247400 Sobic001G311500--Sobic005G112300 Sobic001G311500--Sobic003G059750 Sobic008G009700 Sobic008G009700 Sobic001G311500--Sobic008G009700 Sobic001G311500--Sobic004G314000 Sobic001G311500--Sobic010G279450 Sobic008G028700 Sobic008G028700 Sobic001G311500--Sobic008G028700 Sobic001G311500--Sobic001G363500
Octagon: transcription factors


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