Gene annotation
Transcriptome id Sobic.006G155100.1
Synonym Sb06g023220
Functional annotation expressed protein
UniProt C5YCI7
Pfam -
Panther DB PTHR36793 PTHR36793:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G08540 : -
RAP-DB (Rice) LOC_Os04g44560.1 : expressed protein
MaizeGDB (Corn) Zm00025a010583
Brachypodium KQJ83702
Barley -
Wheat TraesCS2D02G371000 , TraesCS2A02G374600 , TraesCS2B02G391600
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G155100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G090900 expressed protein -
2 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
3 Sobic.001G433100 expressed protein -
4 Sobic.010G098200 peroxidase family protein, expressed -
5 Sobic.001G478600 uroporphyrinogen III synthase, putative, expressed K01719: hemD, uroporphyrinogen-III synthase
6 Sobic.004G171200 WD domain, G-beta repeat domain containing protein, expressed K13124: mitogen-activated protein kinase organizer 1
7 Sobic.002G356200 GCN5-related N-acetyltransferase, putative, expressed K14682: amino-acid N-acetyltransferase
8 Sobic.001G346600 kinesin heavy chain isolog, putative, expressed -
9 Sobic.002G298100 expressed protein -
10 Sobic.009G092900 N-dimethylguanosine tRNA methyltransferase, putative, expressed K00555: TRMT1, tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
11 Sobic.002G181132 - -
12 Sobic.004G018100 glutamyl-tRNA synthetase, putative, expressed K01885: EARS, glutamyl-tRNA synthetase
13 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
14 Sobic.008G104200 nitrilase, putative, expressed -
15 Sobic.001G155400 initiation factor 2 subunit family domain containing protein, expressed K03680: translation initiation factor eIF-2B subunit delta
16 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
17 Sobic.009G251200 expressed protein -
18 Sobic.003G345900 histone deacetylase, putative, expressed -
19 Sobic.007G105900 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed -
20 Sobic.005G026400 pentatricopeptide repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G155100 Sobic006G155100 Sobic008G090900 Sobic008G090900 Sobic006G155100--Sobic008G090900 Sobic004G003900 Sobic004G003900 Sobic006G155100--Sobic004G003900 Sobic001G433100 Sobic001G433100 Sobic006G155100--Sobic001G433100 Sobic010G098200 Sobic010G098200 Sobic006G155100--Sobic010G098200 Sobic001G478600 Sobic001G478600 Sobic006G155100--Sobic001G478600 Sobic004G171200 Sobic004G171200 Sobic006G155100--Sobic004G171200 Sobic002G356200 Sobic002G356200 Sobic006G155100--Sobic002G356200 Sobic001G346600 Sobic001G346600 Sobic006G155100--Sobic001G346600 Sobic002G298100 Sobic002G298100 Sobic006G155100--Sobic002G298100 Sobic008G090900--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic008G090900--Sobic009G092900 Sobic002G181132 Sobic002G181132 Sobic008G090900--Sobic002G181132 Sobic001G382800 Sobic001G382800 Sobic008G090900--Sobic001G382800 Sobic008G067100 Sobic008G067100 Sobic008G090900--Sobic008G067100 Sobic003G045300 Sobic003G045300 Sobic008G090900--Sobic003G045300 Sobic001G375000 Sobic001G375000 Sobic008G090900--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic008G090900--Sobic003G128400 Sobic006G088000 Sobic006G088000 Sobic008G090900--Sobic006G088000 Sobic004G003900--Sobic001G375000 Sobic004G003900--Sobic008G090900 Sobic004G003900--Sobic003G128400 Sobic004G003900--Sobic009G092900 Sobic004G003900--Sobic002G181132 Sobic004G003900--Sobic003G045300 Sobic003G162800 Sobic003G162800 Sobic004G003900--Sobic003G162800 Sobic004G003900--Sobic006G088000 Sobic001G003900 Sobic001G003900 Sobic004G003900--Sobic001G003900 Sobic001G401700 Sobic001G401700 Sobic001G433100--Sobic001G401700 Sobic007G126900 Sobic007G126900 Sobic001G433100--Sobic007G126900 Sobic001G433100--Sobic008G090900 Sobic001G433100--Sobic006G088000 Sobic001G433100--Sobic001G478600 Sobic004G214400 Sobic004G214400 Sobic001G433100--Sobic004G214400 Sobic001G433100--Sobic004G003900 Sobic001G293300 Sobic001G293300 Sobic001G433100--Sobic001G293300 Sobic003G345900 Sobic003G345900 Sobic001G433100--Sobic003G345900 Sobic010G098200--Sobic002G298100 Sobic006G234700 Sobic006G234700 Sobic010G098200--Sobic006G234700 Sobic007G017800 Sobic007G017800 Sobic010G098200--Sobic007G017800 Sobic010G140400 Sobic010G140400 Sobic010G098200--Sobic010G140400 Sobic001G022500 Sobic001G022500 Sobic010G098200--Sobic001G022500 Sobic001G166600 Sobic001G166600 Sobic010G098200--Sobic001G166600 Sobic010G098200--Sobic006G155100 Sobic010G098200--Sobic009G092900 Sobic009G129100 Sobic009G129100 Sobic010G098200--Sobic009G129100 Sobic001G478600--Sobic001G433100 Sobic010G221600 Sobic010G221600 Sobic001G478600--Sobic010G221600 Sobic001G478600--Sobic006G155100 Sobic001G478600--Sobic008G090900 Sobic002G189600 Sobic002G189600 Sobic001G478600--Sobic002G189600 Sobic001G478600--Sobic004G003900 Sobic001G025800 Sobic001G025800 Sobic001G478600--Sobic001G025800 Sobic001G478600--Sobic001G003900 Sobic008G011300 Sobic008G011300 Sobic001G478600--Sobic008G011300 Sobic008G051200 Sobic008G051200 Sobic004G171200--Sobic008G051200 Sobic004G171200--Sobic002G298100 Sobic001G434200 Sobic001G434200 Sobic004G171200--Sobic001G434200 Sobic010G059500 Sobic010G059500 Sobic004G171200--Sobic010G059500 Sobic001G493200 Sobic001G493200 Sobic004G171200--Sobic001G493200 Sobic001G120500 Sobic001G120500 Sobic004G171200--Sobic001G120500 Sobic009G239200 Sobic009G239200 Sobic004G171200--Sobic009G239200 Sobic004G171200--Sobic006G155100 Sobic007G097400 Sobic007G097400 Sobic004G171200--Sobic007G097400 Sobic005G026400 Sobic005G026400 Sobic002G356200--Sobic005G026400 Sobic009G192300 Sobic009G192300 Sobic002G356200--Sobic009G192300 Sobic002G356200--Sobic006G234700 Sobic001G340300 Sobic001G340300 Sobic002G356200--Sobic001G340300 Sobic009G251200 Sobic009G251200 Sobic002G356200--Sobic009G251200 Sobic009G194000 Sobic009G194000 Sobic002G356200--Sobic009G194000 Sobic002G356200--Sobic006G155100 Sobic003G012000 Sobic003G012000 Sobic002G356200--Sobic003G012000 Sobic002G292800 Sobic002G292800 Sobic002G356200--Sobic002G292800 Sobic005G117300 Sobic005G117300 Sobic001G346600--Sobic005G117300 Sobic001G346600--Sobic004G003900 Sobic001G346600--Sobic009G092900 Sobic001G346600--Sobic001G025800 Sobic001G346600--Sobic008G090900 Sobic009G085200 Sobic009G085200 Sobic001G346600--Sobic009G085200 Sobic001G346600--Sobic002G181132 Sobic001G346600--Sobic006G155100 Sobic001G032200 Sobic001G032200 Sobic001G346600--Sobic001G032200 Sobic002G298100--Sobic009G251200 Sobic002G298100--Sobic010G098200 Sobic002G298100--Sobic010G140400 Sobic004G018300 Sobic004G018300 Sobic002G298100--Sobic004G018300 Sobic002G298100--Sobic008G051200 Sobic002G298100--Sobic004G171200 Sobic005G160100 Sobic005G160100 Sobic002G298100--Sobic005G160100 Sobic003G434700 Sobic003G434700 Sobic002G298100--Sobic003G434700 Sobic001G219600 Sobic001G219600 Sobic002G298100--Sobic001G219600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.