Gene annotation
Transcriptome id Sobic.005G084900.5,Sobic.005G084900.3,Sobic.005G084900.6,Sobic.005G084900.4,Sobic.005G084900.1
Synonym Sb05g006920
Functional annotation OsDegp12 - Putative Deg protease homologue, expressed
UniProt A0A1Z5RHB8 , C5Y7R8
Pfam PF13180 PF00089 PF13180 PF13365
Panther DB PTHR22939 PTHR22939:SF95
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0005515protein binding GO:0006508proteolysis GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G27660 : Trypsin family protein with PDZ domain
RAP-DB (Rice) LOC_Os11g14170.1 : OsDegp12 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) Zm00025a029560
Brachypodium KQJ88753 , KQJ88756 , KQJ88758 , KQJ88759
Barley HORVU4Hr1G014960.18 , HORVU4Hr1G014960.19 , HORVU4Hr1G014960.16 , HORVU4Hr1G014960.17 , HORVU4Hr1G014960.14 , HORVU4Hr1G014960.15 , HORVU4Hr1G014960.12 , HORVU4Hr1G014960.13 , HORVU4Hr1G014960.10 , HORVU4Hr1G014960.11 , HORVU4Hr1G014960.22 , HORVU4Hr1G014960.21 , HORVU4Hr1G014960.20 , HORVU4Hr1G014960.9 , HORVU4Hr1G014960.4 , HORVU4Hr1G014960.6 , HORVU4Hr1G014960.7 , HORVU4Hr1G014960.1 , HORVU4Hr1G014960.2 , HORVU4Hr1G014960.3 , HORVU4Hr1G014960.8 , HORVU4Hr1G014960.5
Wheat -
Populus -


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cDNA sequences
Sobic.005G084900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G002000 ankyrin repeat family protein, putative, expressed -
2 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
3 Sobic.006G164000 expressed protein -
4 Sobic.002G280900 la domain containing protein, putative, expressed K18757: la-related protein 1
5 Sobic.001G067000 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
6 Sobic.001G294600 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
7 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
8 Sobic.004G145600 expressed protein -
9 Sobic.010G141600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K00122: formate dehydrogenase
10 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
11 Sobic.008G058700 metal cation transporter, putative, expressed -
12 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
13 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
14 Sobic.002G297600 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
15 Sobic.002G277200 rRNA-processing protein FCF, putative, expressed K14773: U3 small nucleolar RNA-associated protein 23
16 Sobic.003G062400 PHD finger protein, putative, expressed -
17 Sobic.003G119900 inositol-1-monophosphatase, putative, expressed K18649: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase / histidinol-phosphatase
18 Sobic.004G282100 peptidase, putative, expressed K06013: STE24 endopeptidase
19 Sobic.008G160500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@tesmin/TSO1-like CXC domain containing protein, expressed -
20 Sobic.007G036800 xylosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic005G084900 Sobic005G084900 Sobic009G002000 Sobic009G002000 Sobic005G084900--Sobic009G002000 Sobic009G030400 Sobic009G030400 Sobic005G084900--Sobic009G030400 Sobic006G164000 Sobic006G164000 Sobic005G084900--Sobic006G164000 Sobic002G280900 Sobic002G280900 Sobic005G084900--Sobic002G280900 Sobic001G067000 Sobic001G067000 Sobic005G084900--Sobic001G067000 Sobic001G294600 Sobic001G294600 Sobic005G084900--Sobic001G294600 Sobic010G059700 Sobic010G059700 Sobic005G084900--Sobic010G059700 Sobic004G145600 Sobic004G145600 Sobic005G084900--Sobic004G145600 Sobic010G141600 Sobic010G141600 Sobic005G084900--Sobic010G141600 Sobic002G277200 Sobic002G277200 Sobic009G002000--Sobic002G277200 Sobic009G002000--Sobic009G030400 Sobic009G201800 Sobic009G201800 Sobic009G002000--Sobic009G201800 Sobic001G115500 Sobic001G115500 Sobic009G002000--Sobic001G115500 Sobic008G118500 Sobic008G118500 Sobic009G002000--Sobic008G118500 Sobic009G002000--Sobic005G084900 Sobic009G102900 Sobic009G102900 Sobic009G002000--Sobic009G102900 Sobic001G157600 Sobic001G157600 Sobic009G002000--Sobic001G157600 Sobic009G258500 Sobic009G258500 Sobic009G002000--Sobic009G258500 Sobic005G030100 Sobic005G030100 Sobic009G030400--Sobic005G030100 Sobic009G030400--Sobic009G002000 Sobic009G030400--Sobic001G067000 Sobic003G161800 Sobic003G161800 Sobic009G030400--Sobic003G161800 Sobic008G160500 Sobic008G160500 Sobic009G030400--Sobic008G160500 Sobic002G390400 Sobic002G390400 Sobic009G030400--Sobic002G390400 Sobic009G030400--Sobic010G141600 Sobic006G061100 Sobic006G061100 Sobic009G030400--Sobic006G061100 Sobic009G055600 Sobic009G055600 Sobic009G030400--Sobic009G055600 Sobic003G358200 Sobic003G358200 Sobic006G164000--Sobic003G358200 Sobic004G155300 Sobic004G155300 Sobic006G164000--Sobic004G155300 Sobic006G164000--Sobic005G084900 Sobic001G419700 Sobic001G419700 Sobic006G164000--Sobic001G419700 Sobic002G420800 Sobic002G420800 Sobic006G164000--Sobic002G420800 Sobic003G159500 Sobic003G159500 Sobic006G164000--Sobic003G159500 Sobic004G345100 Sobic004G345100 Sobic006G164000--Sobic004G345100 Sobic002G400400 Sobic002G400400 Sobic006G164000--Sobic002G400400 Sobic001G170500 Sobic001G170500 Sobic006G164000--Sobic001G170500 Sobic002G280900--Sobic010G059700 Sobic001G506000 Sobic001G506000 Sobic002G280900--Sobic001G506000 Sobic007G031100 Sobic007G031100 Sobic002G280900--Sobic007G031100 Sobic001G432100 Sobic001G432100 Sobic002G280900--Sobic001G432100 Sobic004G151200 Sobic004G151200 Sobic002G280900--Sobic004G151200 Sobic002G280900--Sobic005G084900 Sobic002G280900--Sobic009G002000 Sobic001G302900 Sobic001G302900 Sobic002G280900--Sobic001G302900 Sobic007G140600 Sobic007G140600 Sobic002G280900--Sobic007G140600 Sobic003G026900 Sobic003G026900 Sobic001G067000--Sobic003G026900 Sobic006G143300 Sobic006G143300 Sobic001G067000--Sobic006G143300 Sobic001G067000--Sobic002G420800 Sobic002G230400 Sobic002G230400 Sobic001G067000--Sobic002G230400 Sobic007G076500 Sobic007G076500 Sobic001G067000--Sobic007G076500 Sobic002G147466 Sobic002G147466 Sobic001G067000--Sobic002G147466 Sobic004G196800 Sobic004G196800 Sobic001G067000--Sobic004G196800 Sobic007G199500 Sobic007G199500 Sobic001G067000--Sobic007G199500 Sobic010G193700 Sobic010G193700 Sobic001G067000--Sobic010G193700 Sobic001G294600--Sobic003G358200 Sobic003G252900 Sobic003G252900 Sobic001G294600--Sobic003G252900 Sobic008G058700 Sobic008G058700 Sobic001G294600--Sobic008G058700 Sobic006G107400 Sobic006G107400 Sobic001G294600--Sobic006G107400 Sobic001G294600--Sobic005G084900 Sobic001G294600--Sobic001G067000 Sobic001G168500 Sobic001G168500 Sobic001G294600--Sobic001G168500 Sobic001G379000 Sobic001G379000 Sobic001G294600--Sobic001G379000 Sobic001G294600--Sobic006G164000 Sobic007G036800 Sobic007G036800 Sobic010G059700--Sobic007G036800 Sobic002G306600 Sobic002G306600 Sobic010G059700--Sobic002G306600 Sobic009G063800 Sobic009G063800 Sobic010G059700--Sobic009G063800 Sobic003G224300 Sobic003G224300 Sobic010G059700--Sobic003G224300 Sobic007G146600 Sobic007G146600 Sobic010G059700--Sobic007G146600 Sobic003G222700 Sobic003G222700 Sobic010G059700--Sobic003G222700 Sobic003G148900 Sobic003G148900 Sobic010G059700--Sobic003G148900 Sobic010G059700--Sobic004G145600 Sobic007G022700 Sobic007G022700 Sobic010G059700--Sobic007G022700 Sobic004G145600--Sobic007G036800 Sobic003G010900 Sobic003G010900 Sobic004G145600--Sobic003G010900 Sobic004G084400 Sobic004G084400 Sobic004G145600--Sobic004G084400 Sobic003G005900 Sobic003G005900 Sobic004G145600--Sobic003G005900 Sobic005G040900 Sobic005G040900 Sobic004G145600--Sobic005G040900 Sobic003G062400 Sobic003G062400 Sobic004G145600--Sobic003G062400 Sobic007G148400 Sobic007G148400 Sobic004G145600--Sobic007G148400 Sobic004G145600--Sobic003G222700 Sobic004G145600--Sobic010G059700 Sobic010G141600--Sobic009G030400 Sobic002G208400 Sobic002G208400 Sobic010G141600--Sobic002G208400 Sobic010G141600--Sobic009G002000 Sobic006G193500 Sobic006G193500 Sobic010G141600--Sobic006G193500 Sobic001G373000 Sobic001G373000 Sobic010G141600--Sobic001G373000 Sobic010G141600--Sobic001G115500 Sobic001G013300 Sobic001G013300 Sobic010G141600--Sobic001G013300 Sobic009G113100 Sobic009G113100 Sobic010G141600--Sobic009G113100 Sobic002G263200 Sobic002G263200 Sobic010G141600--Sobic002G263200
Octagon: transcription factors


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