Gene annotation
Transcriptome id Sobic.004G300300.1
Synonym Sb04g033380, ATHB-7, HB-7, ATHB7
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
homeobox associated leucine zipper, putative, expressed
UniProt C5XS34
Pfam PF00046 PF02183
Panther DB PTHR24326 PTHR24326:SF234
NCBI CDD KOG0483; Transcription factor HEX, contains HOX and HALZ domains
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G46680 : homeobox 7
RAP-DB (Rice) LOC_Os02g43330.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a020933 , Zm00025a010383 , Zm00025a056627 , Zm00025a014413 , Zm00025a032630 , Zm00025a047756 , Zm00025a032167
Brachypodium KQJ83857 , KQK00550 , KQJ91150
Barley HORVU2Hr1G092710.3 , HORVU2Hr1G092710.2 , HORVU2Hr1G092710.1 , HORVU2Hr1G092710.7 , HORVU2Hr1G092710.6 , HORVU2Hr1G092710.5 , HORVU2Hr1G092710.4 , HORVU2Hr1G092710.9 , HORVU2Hr1G092710.8 , HORVU2Hr1G092710.13 , HORVU2Hr1G092710.12 , HORVU2Hr1G092710.11 , HORVU2Hr1G092710.10 , HORVU5Hr1G081090.2 , HORVU5Hr1G081090.1 , HORVU6Hr1G061390.1 , HORVU6Hr1G061390.3 , HORVU6Hr1G061390.2
Wheat TraesCS5D02G323100 , TraesCS5D02G323100 , TraesCS6A02G240400 , TraesCS4A02G016600 , TraesCS5A02G316800 , TraesCS2A02G389400 , TraesCS5B02G317400 , TraesCS6B02G284300 , TraesCS2B02G407600 , TraesCS2D02G387300 , TraesCS6D02G222600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
2 Sobic.003G424500 Putative uncharacterized protein(PubMedID : 24906815)@expressed protein -
3 Sobic.009G167000 expressed protein -
4 Sobic.002G135800 chlorophyllase-2, chloroplast precursor, putative, expressed K08099: chlorophyllase
5 Sobic.002G188700 armadillo/beta-catenin repeat family protein, putative, expressed -
6 Sobic.007G101800 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed -
7 Sobic.003G087100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
9 Sobic.009G076500 expressed protein -
10 Sobic.008G058900 amino acid transporter, putative, expressed -
11 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
12 Sobic.003G146000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@methyltransferase, putative, expressed -
13 Sobic.001G075800 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
14 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
15 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.004G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09843: (+)-abscisic acid 8'-hydroxylase
18 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
19 Sobic.010G105500 - -
20 Sobic.004G176900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.9 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -


Gene co-expression network
sample Sobic004G300300 Sobic004G300300 Sobic002G021300 Sobic002G021300 Sobic004G300300--Sobic002G021300 Sobic003G424500 Sobic003G424500 Sobic004G300300--Sobic003G424500 Sobic009G167000 Sobic009G167000 Sobic004G300300--Sobic009G167000 Sobic002G135800 Sobic002G135800 Sobic004G300300--Sobic002G135800 Sobic002G188700 Sobic002G188700 Sobic004G300300--Sobic002G188700 Sobic007G101800 Sobic007G101800 Sobic004G300300--Sobic007G101800 Sobic003G087100 Sobic003G087100 Sobic004G300300--Sobic003G087100 Sobic008G059000 Sobic008G059000 Sobic004G300300--Sobic008G059000 Sobic009G076500 Sobic009G076500 Sobic004G300300--Sobic009G076500 Sobic002G021300--Sobic009G167000 Sobic002G021300--Sobic004G300300 Sobic004G281200 Sobic004G281200 Sobic002G021300--Sobic004G281200 Sobic002G021300--Sobic009G076500 Sobic002G021300--Sobic008G059000 Sobic002G037400 Sobic002G037400 Sobic002G021300--Sobic002G037400 Sobic006G026400 Sobic006G026400 Sobic002G021300--Sobic006G026400 Sobic006G194600 Sobic006G194600 Sobic002G021300--Sobic006G194600 Sobic004G244100 Sobic004G244100 Sobic002G021300--Sobic004G244100 Sobic003G146000 Sobic003G146000 Sobic003G424500--Sobic003G146000 Sobic003G424500--Sobic004G300300 Sobic010G247500 Sobic010G247500 Sobic003G424500--Sobic010G247500 Sobic010G105500 Sobic010G105500 Sobic003G424500--Sobic010G105500 Sobic003G424500--Sobic009G167000 Sobic009G030600 Sobic009G030600 Sobic003G424500--Sobic009G030600 Sobic003G424500--Sobic003G087100 Sobic003G424500--Sobic008G059000 Sobic003G424500--Sobic009G076500 Sobic009G167000--Sobic002G021300 Sobic004G244300 Sobic004G244300 Sobic009G167000--Sobic004G244300 Sobic009G167000--Sobic006G194600 Sobic009G167000--Sobic004G244100 Sobic009G167000--Sobic004G281200 Sobic002G217100 Sobic002G217100 Sobic009G167000--Sobic002G217100 Sobic009G167000--Sobic009G076500 Sobic008G058900 Sobic008G058900 Sobic009G167000--Sobic008G058900 Sobic009G167000--Sobic008G059000 Sobic002G135800--Sobic004G300300 Sobic008G036000 Sobic008G036000 Sobic002G135800--Sobic008G036000 Sobic002G135800--Sobic003G146000 Sobic002G135800--Sobic003G424500 Sobic002G197600 Sobic002G197600 Sobic002G135800--Sobic002G197600 Sobic002G135800--Sobic009G167000 Sobic003G158600 Sobic003G158600 Sobic002G135800--Sobic003G158600 Sobic002G135800--Sobic008G059000 Sobic002G135800--Sobic009G076500 Sobic004G268700 Sobic004G268700 Sobic002G188700--Sobic004G268700 Sobic002G188700--Sobic009G167000 Sobic002G188700--Sobic002G021300 Sobic002G188700--Sobic004G300300 Sobic003G082000 Sobic003G082000 Sobic002G188700--Sobic003G082000 Sobic002G188700--Sobic008G058900 Sobic002G188700--Sobic009G076500 Sobic006G208100 Sobic006G208100 Sobic002G188700--Sobic006G208100 Sobic010G201200 Sobic010G201200 Sobic002G188700--Sobic010G201200 Sobic009G170100 Sobic009G170100 Sobic007G101800--Sobic009G170100 Sobic007G101800--Sobic004G300300 Sobic010G265600 Sobic010G265600 Sobic007G101800--Sobic010G265600 Sobic010G105800 Sobic010G105800 Sobic007G101800--Sobic010G105800 Sobic001G473900 Sobic001G473900 Sobic007G101800--Sobic001G473900 Sobic009G071800 Sobic009G071800 Sobic007G101800--Sobic009G071800 Sobic006G032200 Sobic006G032200 Sobic007G101800--Sobic006G032200 Sobic002G203000 Sobic002G203000 Sobic007G101800--Sobic002G203000 Sobic004G084100 Sobic004G084100 Sobic007G101800--Sobic004G084100 Sobic003G087100--Sobic004G281200 Sobic003G087100--Sobic002G037400 Sobic006G203000 Sobic006G203000 Sobic003G087100--Sobic006G203000 Sobic003G087100--Sobic008G059000 Sobic002G110200 Sobic002G110200 Sobic003G087100--Sobic002G110200 Sobic004G309600 Sobic004G309600 Sobic003G087100--Sobic004G309600 Sobic003G087100--Sobic003G424500 Sobic001G081600 Sobic001G081600 Sobic003G087100--Sobic001G081600 Sobic001G075101 Sobic001G075101 Sobic003G087100--Sobic001G075101 Sobic008G059000--Sobic004G281200 Sobic008G059000--Sobic008G058900 Sobic008G059000--Sobic002G021300 Sobic008G059000--Sobic003G087100 Sobic008G059000--Sobic006G194600 Sobic008G059000--Sobic009G167000 Sobic008G059000--Sobic004G244100 Sobic008G059000--Sobic009G076500 Sobic010G016500 Sobic010G016500 Sobic008G059000--Sobic010G016500 Sobic009G076500--Sobic002G021300 Sobic009G076700 Sobic009G076700 Sobic009G076500--Sobic009G076700 Sobic009G076500--Sobic002G037400 Sobic009G076500--Sobic006G026400 Sobic009G076500--Sobic006G203000 Sobic009G076500--Sobic009G167000 Sobic009G076500--Sobic004G244100 Sobic009G076500--Sobic008G059000 Sobic009G076500--Sobic006G194600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.