Gene annotation
Transcriptome id Sobic.004G179400.10,Sobic.004G179400.11,Sobic.004G179400.9,Sobic.004G179400.12,Sobic.004G179400.8,Sobic.004G179400.1,Sobic.004G179400.2,Sobic.004G179400.4,Sobic.004G179400.6,Sobic.004G179400.7,Sobic.004G179400.3,Sobic.004G179400.5
Synonym ATFC-II, Sb04g022900, FC2, FC-II
Functional annotation ferrochelatase 2 (PubMedID : 26465154)
ferrochelatase-2, chloroplast precursor, putative, expressed
UniProt A0A1Z5RN30 , A0A1Z5RN09 , A0A1Z5RP46 , A0A1Z5RN80 , A0A1Z5RNG8 , C5XUV4
Pfam PF00762
Panther DB PTHR11108 PTHR11108:SF5
NCBI CDD -
KEGG Orthology K01772; hemH, protoporphyrin/coproporphyrin ferrochelatase
Gene Ontology GO:0006783; heme biosynthetic process GO:0004325ferrochelatase activity


Orthologs (automatic annotation)
TAIR AT2G30390 : ferrochelatase 2
RAP-DB (Rice) LOC_Os05g29760.2,LOC_Os05g29760.1 : ferrochelatase-2, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020716
Brachypodium PNT73699
Barley HORVU1Hr1G031230.8 , HORVU1Hr1G031230.9 , HORVU1Hr1G031230.1 , HORVU1Hr1G031230.2 , HORVU1Hr1G031230.3 , HORVU1Hr1G031230.5 , HORVU1Hr1G031230.6 , HORVU1Hr1G031230.7 , HORVU1Hr1G031230.12 , HORVU1Hr1G031230.13 , HORVU1Hr1G031230.10 , HORVU1Hr1G031230.11 , HORVU1Hr1G031230.16 , HORVU1Hr1G031230.17 , HORVU1Hr1G031230.14 , HORVU1Hr1G031230.15 , HORVU1Hr1G031230.18 , HORVU1Hr1G031230.19
Wheat TraesCS1A02G135700 , TraesCS1A02G135700 , TraesCS1A02G135700 , TraesCS1A02G135700 , TraesCS1D02G131200 , TraesCS1D02G131200 , TraesCS1D02G131200 , TraesCS1D02G131200 , TraesCS1B02G150400 , TraesCS1B02G150400 , TraesCS1B02G150400
Populus -


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cDNA sequences
Sobic.004G179400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G540600 expressed protein -
2 Sobic.001G060500 YT521-B, putative, expressed -
3 Sobic.009G207900 expressed protein -
4 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
5 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
6 Sobic.003G125900 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed K02470: DNA gyrase subunit B
7 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
8 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
9 Sobic.001G504400 expressed protein -
10 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
11 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.009G121000 expressed protein -
13 Sobic.003G203300 stress regulated protein, putative, expressed -
14 Sobic.007G107700 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
15 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
16 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
17 Sobic.004G298900 OR, putative, expressed -
18 Sobic.010G125833 - -
19 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
20 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G179400 Sobic004G179400 Sobic001G540600 Sobic001G540600 Sobic004G179400--Sobic001G540600 Sobic001G060500 Sobic001G060500 Sobic004G179400--Sobic001G060500 Sobic009G207900 Sobic009G207900 Sobic004G179400--Sobic009G207900 Sobic002G028400 Sobic002G028400 Sobic004G179400--Sobic002G028400 Sobic008G074000 Sobic008G074000 Sobic004G179400--Sobic008G074000 Sobic003G125900 Sobic003G125900 Sobic004G179400--Sobic003G125900 Sobic001G378100 Sobic001G378100 Sobic004G179400--Sobic001G378100 Sobic009G170200 Sobic009G170200 Sobic004G179400--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic004G179400--Sobic001G504400 Sobic001G540600--Sobic001G378100 Sobic001G217900 Sobic001G217900 Sobic001G540600--Sobic001G217900 Sobic001G077300 Sobic001G077300 Sobic001G540600--Sobic001G077300 Sobic001G540600--Sobic009G170200 Sobic002G206300 Sobic002G206300 Sobic001G540600--Sobic002G206300 Sobic010G231300 Sobic010G231300 Sobic001G540600--Sobic010G231300 Sobic001G540600--Sobic004G179400 Sobic001G540600--Sobic009G207900 Sobic003G073800 Sobic003G073800 Sobic001G540600--Sobic003G073800 Sobic006G233700 Sobic006G233700 Sobic001G060500--Sobic006G233700 Sobic001G060500--Sobic004G179400 Sobic002G073200 Sobic002G073200 Sobic001G060500--Sobic002G073200 Sobic003G190000 Sobic003G190000 Sobic001G060500--Sobic003G190000 Sobic003G203300 Sobic003G203300 Sobic001G060500--Sobic003G203300 Sobic002G173100 Sobic002G173100 Sobic001G060500--Sobic002G173100 Sobic010G110400 Sobic010G110400 Sobic001G060500--Sobic010G110400 Sobic001G060500--Sobic003G125900 Sobic003G108900 Sobic003G108900 Sobic001G060500--Sobic003G108900 Sobic006G212800 Sobic006G212800 Sobic009G207900--Sobic006G212800 Sobic001G180200 Sobic001G180200 Sobic009G207900--Sobic001G180200 Sobic009G207900--Sobic002G206300 Sobic009G207900--Sobic001G504400 Sobic009G219100 Sobic009G219100 Sobic009G207900--Sobic009G219100 Sobic007G135800 Sobic007G135800 Sobic009G207900--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic009G207900--Sobic009G038701 Sobic009G207900--Sobic003G073800 Sobic009G062400 Sobic009G062400 Sobic009G207900--Sobic009G062400 Sobic002G133900 Sobic002G133900 Sobic002G028400--Sobic002G133900 Sobic003G094350 Sobic003G094350 Sobic002G028400--Sobic003G094350 Sobic001G500600 Sobic001G500600 Sobic002G028400--Sobic001G500600 Sobic003G070900 Sobic003G070900 Sobic002G028400--Sobic003G070900 Sobic002G028400--Sobic009G170200 Sobic002G028400--Sobic008G074000 Sobic002G028400--Sobic001G540600 Sobic003G287900 Sobic003G287900 Sobic002G028400--Sobic003G287900 Sobic007G103400 Sobic007G103400 Sobic002G028400--Sobic007G103400 Sobic008G074000--Sobic003G070900 Sobic008G074000--Sobic007G103400 Sobic008G074000--Sobic002G133900 Sobic003G233700 Sobic003G233700 Sobic008G074000--Sobic003G233700 Sobic009G237000 Sobic009G237000 Sobic008G074000--Sobic009G237000 Sobic008G074000--Sobic001G504400 Sobic004G353100 Sobic004G353100 Sobic008G074000--Sobic004G353100 Sobic008G074000--Sobic009G170200 Sobic008G074000--Sobic009G219100 Sobic002G331800 Sobic002G331800 Sobic003G125900--Sobic002G331800 Sobic003G125900--Sobic004G179400 Sobic003G125900--Sobic003G070900 Sobic003G125900--Sobic003G094350 Sobic003G125900--Sobic001G060500 Sobic001G118400 Sobic001G118400 Sobic003G125900--Sobic001G118400 Sobic004G252500 Sobic004G252500 Sobic003G125900--Sobic004G252500 Sobic003G125900--Sobic002G028400 Sobic003G125900--Sobic001G500600 Sobic001G378100--Sobic003G073800 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G378100--Sobic001G077300 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic009G170200--Sobic003G070900 Sobic009G170200--Sobic006G232600 Sobic007G087100 Sobic007G087100 Sobic009G170200--Sobic007G087100 Sobic004G103300 Sobic004G103300 Sobic009G170200--Sobic004G103300 Sobic009G170200--Sobic002G133900 Sobic009G170200--Sobic001G077300 Sobic009G170200--Sobic004G353100 Sobic009G170200--Sobic001G378100 Sobic009G170200--Sobic007G103400 Sobic001G504400--Sobic002G206300 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic008G033000 Sobic008G033000 Sobic001G504400--Sobic008G033000 Sobic001G504400--Sobic001G180200 Sobic001G504400--Sobic001G378100
Octagon: transcription factors


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