Gene annotation
Transcriptome id Sobic.003G435300.2,Sobic.003G435300.1
Synonym
Functional annotation OsDegp14 - Putative Deg protease homologue, expressed
UniProt A0A1B6Q8D4
Pfam PF13365
Panther DB PTHR18868 PTHR18868:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g04750.1 : OsDegp14 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G435300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G054700 growth regulator related protein, putative, expressed -
2 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
3 Sobic.001G539400 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
4 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
5 Sobic.003G358600 similar to Phosphorylase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
6 Sobic.008G120920 - -
7 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.009G220700 - -
9 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
10 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
11 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
12 Sobic.004G116400 OsFBK5 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
14 Sobic.001G387300 exostosin family domain containing protein, expressed -
15 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
17 Sobic.004G145701 - K02978: RP-S27e, small subunit ribosomal protein S27e
18 Sobic.003G004800 ATP binding protein, putative, expressed -
19 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.004G046800 expressed protein -


Gene co-expression network
sample Sobic003G435300 Sobic003G435300 Sobic008G054700 Sobic008G054700 Sobic003G435300--Sobic008G054700 Sobic006G265800 Sobic006G265800 Sobic003G435300--Sobic006G265800 Sobic001G539400 Sobic001G539400 Sobic003G435300--Sobic001G539400 Sobic010G153400 Sobic010G153400 Sobic003G435300--Sobic010G153400 Sobic003G358600 Sobic003G358600 Sobic003G435300--Sobic003G358600 Sobic008G120920 Sobic008G120920 Sobic003G435300--Sobic008G120920 Sobic001G384200 Sobic001G384200 Sobic003G435300--Sobic001G384200 Sobic009G220700 Sobic009G220700 Sobic003G435300--Sobic009G220700 Sobic001G400000 Sobic001G400000 Sobic003G435300--Sobic001G400000 Sobic008G054700--Sobic006G265800 Sobic004G145701 Sobic004G145701 Sobic008G054700--Sobic004G145701 Sobic008G030501 Sobic008G030501 Sobic008G054700--Sobic008G030501 Sobic003G244400 Sobic003G244400 Sobic008G054700--Sobic003G244400 Sobic004G046800 Sobic004G046800 Sobic008G054700--Sobic004G046800 Sobic008G054700--Sobic001G384200 Sobic008G124600 Sobic008G124600 Sobic008G054700--Sobic008G124600 Sobic004G057300 Sobic004G057300 Sobic008G054700--Sobic004G057300 Sobic008G054700--Sobic001G400000 Sobic006G265800--Sobic001G384200 Sobic006G134500 Sobic006G134500 Sobic006G265800--Sobic006G134500 Sobic006G265800--Sobic001G400000 Sobic009G163100 Sobic009G163100 Sobic006G265800--Sobic009G163100 Sobic009G201000 Sobic009G201000 Sobic006G265800--Sobic009G201000 Sobic003G024100 Sobic003G024100 Sobic006G265800--Sobic003G024100 Sobic008G156600 Sobic008G156600 Sobic006G265800--Sobic008G156600 Sobic006G265800--Sobic003G244400 Sobic008G007600 Sobic008G007600 Sobic006G265800--Sobic008G007600 Sobic001G539400--Sobic008G054700 Sobic003G065201 Sobic003G065201 Sobic001G539400--Sobic003G065201 Sobic008G007700 Sobic008G007700 Sobic001G539400--Sobic008G007700 Sobic001G539400--Sobic003G358600 Sobic005G174750 Sobic005G174750 Sobic001G539400--Sobic005G174750 Sobic006G193400 Sobic006G193400 Sobic001G539400--Sobic006G193400 Sobic009G178400 Sobic009G178400 Sobic001G539400--Sobic009G178400 Sobic009G229400 Sobic009G229400 Sobic001G539400--Sobic009G229400 Sobic001G387300 Sobic001G387300 Sobic001G539400--Sobic001G387300 Sobic002G348400 Sobic002G348400 Sobic010G153400--Sobic002G348400 Sobic003G004800 Sobic003G004800 Sobic010G153400--Sobic003G004800 Sobic002G392400 Sobic002G392400 Sobic010G153400--Sobic002G392400 Sobic008G022400 Sobic008G022400 Sobic010G153400--Sobic008G022400 Sobic001G131900 Sobic001G131900 Sobic010G153400--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic010G153400--Sobic003G293400 Sobic010G153400--Sobic006G265800 Sobic001G117900 Sobic001G117900 Sobic010G153400--Sobic001G117900 Sobic004G328100 Sobic004G328100 Sobic010G153400--Sobic004G328100 Sobic001G308000 Sobic001G308000 Sobic003G358600--Sobic001G308000 Sobic003G358600--Sobic006G193400 Sobic003G358600--Sobic009G178400 Sobic009G238650 Sobic009G238650 Sobic003G358600--Sobic009G238650 Sobic007G048101 Sobic007G048101 Sobic003G358600--Sobic007G048101 Sobic006G204400 Sobic006G204400 Sobic003G358600--Sobic006G204400 Sobic002G088600 Sobic002G088600 Sobic003G358600--Sobic002G088600 Sobic001G340800 Sobic001G340800 Sobic003G358600--Sobic001G340800 Sobic003G358600--Sobic003G244400 Sobic002G111100 Sobic002G111100 Sobic008G120920--Sobic002G111100 Sobic008G055200 Sobic008G055200 Sobic008G120920--Sobic008G055200 Sobic008G120920--Sobic004G046800 Sobic005G002100 Sobic005G002100 Sobic008G120920--Sobic005G002100 Sobic008G120920--Sobic003G244400 Sobic005G136100 Sobic005G136100 Sobic008G120920--Sobic005G136100 Sobic001G103100 Sobic001G103100 Sobic008G120920--Sobic001G103100 Sobic003G290500 Sobic003G290500 Sobic008G120920--Sobic003G290500 Sobic004G358000 Sobic004G358000 Sobic008G120920--Sobic004G358000 Sobic001G384200--Sobic003G024100 Sobic001G384200--Sobic001G340800 Sobic008G166100 Sobic008G166100 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic001G384200--Sobic003G244400 Sobic001G432200 Sobic001G432200 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic007G039200 Sobic007G039200 Sobic001G384200--Sobic007G039200 Sobic009G220700--Sobic008G156600 Sobic009G220700--Sobic009G163100 Sobic001G072000 Sobic001G072000 Sobic009G220700--Sobic001G072000 Sobic003G217800 Sobic003G217800 Sobic009G220700--Sobic003G217800 Sobic001G322400 Sobic001G322400 Sobic009G220700--Sobic001G322400 Sobic001G485700 Sobic001G485700 Sobic009G220700--Sobic001G485700 Sobic010G073900 Sobic010G073900 Sobic009G220700--Sobic010G073900 Sobic003G352900 Sobic003G352900 Sobic009G220700--Sobic003G352900 Sobic009G025700 Sobic009G025700 Sobic009G220700--Sobic009G025700 Sobic004G113600 Sobic004G113600 Sobic001G400000--Sobic004G113600 Sobic001G112600 Sobic001G112600 Sobic001G400000--Sobic001G112600 Sobic001G400000--Sobic001G384200 Sobic005G050400 Sobic005G050400 Sobic001G400000--Sobic005G050400 Sobic001G400000--Sobic003G244400 Sobic001G400000--Sobic006G265800 Sobic004G007400 Sobic004G007400 Sobic001G400000--Sobic004G007400 Sobic008G055600 Sobic008G055600 Sobic001G400000--Sobic008G055600 Sobic001G400000--Sobic008G156600
Octagon: transcription factors


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