Gene annotation
Transcriptome id Sobic.003G240100.1
Synonym Sb03g029740, TBL21
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XF89
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G15890 : TRICHOME BIREFRINGENCE-LIKE 21
RAP-DB (Rice) LOC_Os01g46400.1 : expressed protein
MaizeGDB (Corn) Zm00025a028225 , Zm00025a028224
Brachypodium KQK14489 , KQK08990
Barley HORVU3Hr1G058830.4 , HORVU3Hr1G058830.1 , HORVU3Hr1G058830.3 , HORVU3Hr1G058830.2
Wheat TraesCS3D02G236700 , TraesCS3D02G236700 , TraesCS3A02G236200 , TraesCS3A02G236200 , TraesCS3A02G236200 , TraesCS3B02G263600 , TraesCS3B02G263600 , TraesCS3B02G263600 , TraesCS3D02G236700
Populus -


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cDNA sequences
Sobic.003G240100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G253900 growth regulator related protein, putative, expressed -
2 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
3 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
4 Sobic.003G217500 expressed protein -
5 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
6 Sobic.001G369800 monocopper oxidase, putative, expressed -
7 Sobic.008G026400 expressed protein -
8 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
9 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
10 Sobic.001G212600 a_IG002N01.7, putative, expressed -
11 Sobic.006G183600 IQ calmodulin-binding motif family protein, putative, expressed -
12 Sobic.006G160200 MSP domain containing protein, expressed -
13 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
14 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
15 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
16 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
17 Sobic.006G200901 - -
18 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
19 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.003G214900 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic003G240100 Sobic003G240100 Sobic002G253900 Sobic002G253900 Sobic003G240100--Sobic002G253900 Sobic002G006100 Sobic002G006100 Sobic003G240100--Sobic002G006100 Sobic001G382400 Sobic001G382400 Sobic003G240100--Sobic001G382400 Sobic003G217500 Sobic003G217500 Sobic003G240100--Sobic003G217500 Sobic001G123100 Sobic001G123100 Sobic003G240100--Sobic001G123100 Sobic001G369800 Sobic001G369800 Sobic003G240100--Sobic001G369800 Sobic008G026400 Sobic008G026400 Sobic003G240100--Sobic008G026400 Sobic009G254000 Sobic009G254000 Sobic003G240100--Sobic009G254000 Sobic004G145300 Sobic004G145300 Sobic003G240100--Sobic004G145300 Sobic009G148000 Sobic009G148000 Sobic002G253900--Sobic009G148000 Sobic002G253900--Sobic001G123100 Sobic006G200901 Sobic006G200901 Sobic002G253900--Sobic006G200901 Sobic002G343000 Sobic002G343000 Sobic002G253900--Sobic002G343000 Sobic001G005800 Sobic001G005800 Sobic002G253900--Sobic001G005800 Sobic001G540700 Sobic001G540700 Sobic002G253900--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic002G253900--Sobic006G218900 Sobic002G284100 Sobic002G284100 Sobic002G253900--Sobic002G284100 Sobic002G253900--Sobic002G006100 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic006G272800 Sobic006G272800 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic001G382400--Sobic003G240100 Sobic002G345800 Sobic002G345800 Sobic001G382400--Sobic002G345800 Sobic001G116600 Sobic001G116600 Sobic001G382400--Sobic001G116600 Sobic007G125700 Sobic007G125700 Sobic001G382400--Sobic007G125700 Sobic007G219200 Sobic007G219200 Sobic001G382400--Sobic007G219200 Sobic004G207000 Sobic004G207000 Sobic001G382400--Sobic004G207000 Sobic009G082600 Sobic009G082600 Sobic001G382400--Sobic009G082600 Sobic001G382400--Sobic001G123100 Sobic003G410700 Sobic003G410700 Sobic001G382400--Sobic003G410700 Sobic004G250600 Sobic004G250600 Sobic003G217500--Sobic004G250600 Sobic003G217500--Sobic006G200901 Sobic004G014100 Sobic004G014100 Sobic003G217500--Sobic004G014100 Sobic003G217500--Sobic002G343000 Sobic003G217500--Sobic009G148000 Sobic006G140300 Sobic006G140300 Sobic003G217500--Sobic006G140300 Sobic004G196800 Sobic004G196800 Sobic003G217500--Sobic004G196800 Sobic003G304500 Sobic003G304500 Sobic003G217500--Sobic003G304500 Sobic006G186300 Sobic006G186300 Sobic003G217500--Sobic006G186300 Sobic001G123100--Sobic002G284100 Sobic001G123100--Sobic002G253900 Sobic001G123100--Sobic001G369800 Sobic005G143100 Sobic005G143100 Sobic001G123100--Sobic005G143100 Sobic001G123100--Sobic004G145300 Sobic001G123300 Sobic001G123300 Sobic001G123100--Sobic001G123300 Sobic001G123100--Sobic001G540700 Sobic001G123100--Sobic002G006100 Sobic003G224700 Sobic003G224700 Sobic001G123100--Sobic003G224700 Sobic001G369800--Sobic002G284100 Sobic001G487200 Sobic001G487200 Sobic001G369800--Sobic001G487200 Sobic001G369800--Sobic001G123100 Sobic001G369800--Sobic001G540700 Sobic001G369800--Sobic006G218900 Sobic009G212100 Sobic009G212100 Sobic001G369800--Sobic009G212100 Sobic003G283600 Sobic003G283600 Sobic001G369800--Sobic003G283600 Sobic001G369800--Sobic003G351900 Sobic001G212600 Sobic001G212600 Sobic001G369800--Sobic001G212600 Sobic008G026400--Sobic003G240100 Sobic003G214900 Sobic003G214900 Sobic008G026400--Sobic003G214900 Sobic008G026400--Sobic002G006100 Sobic008G026400--Sobic009G254000 Sobic008G026400--Sobic005G143100 Sobic008G026400--Sobic001G123100 Sobic008G026400--Sobic003G217500 Sobic008G026400--Sobic004G145300 Sobic010G212700 Sobic010G212700 Sobic008G026400--Sobic010G212700 Sobic009G254000--Sobic006G140300 Sobic007G197100 Sobic007G197100 Sobic009G254000--Sobic007G197100 Sobic009G254000--Sobic003G298900 Sobic002G366000 Sobic002G366000 Sobic009G254000--Sobic002G366000 Sobic009G254000--Sobic001G540700 Sobic009G254000--Sobic003G224700 Sobic009G254000--Sobic002G006100 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic004G145300--Sobic001G123100 Sobic004G145300--Sobic001G369800 Sobic004G145300--Sobic001G123300 Sobic004G145300--Sobic003G224700 Sobic004G145300--Sobic002G284100 Sobic002G335500 Sobic002G335500 Sobic004G145300--Sobic002G335500 Sobic004G145300--Sobic002G006100 Sobic001G171100 Sobic001G171100 Sobic004G145300--Sobic001G171100 Sobic004G145300--Sobic006G200901
Octagon: transcription factors


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