Gene annotation
Transcriptome id Sobic.002G314800.1
Synonym sks5, Sb02g034420
Functional annotation monocopper oxidase, putative, expressed
UniProt C5X9Y2
Pfam PF07731 PF07732 PF00394
Panther DB PTHR11709 PTHR11709:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT1G76160 : SKU5 similar 5
RAP-DB (Rice) LOC_Os07g32660.1 : monocopper oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a048186 , Zm00025a027087 , Zm00025a039788
Brachypodium KQK16054 , KQK17099 , KQK05703
Barley HORVU7Hr1G105620.5 , HORVU7Hr1G105620.4 , HORVU7Hr1G105620.7 , HORVU7Hr1G105620.6 , HORVU7Hr1G105620.1 , HORVU7Hr1G105620.3 , HORVU7Hr1G105620.2 , HORVU7Hr1G105620.8 , HORVU2Hr1G047260.1 , HORVU2Hr1G047260.3 , HORVU2Hr1G047260.2 , HORVU2Hr1G047260.5 , HORVU2Hr1G047260.4 , HORVU2Hr1G047260.6 , HORVU7Hr1G105620.11 , HORVU7Hr1G105620.10
Wheat TraesCS7B02G359700 , TraesCS2B02G274800 , TraesCS7D02G447200 , TraesCS2A02G224600 , TraesCS7A02G459400 , TraesCS2B02G274800 , TraesCS2D02G403100 , TraesCS2D02G230800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G078300 leaf senescence related protein, putative, expressed -
2 Sobic.001G099300 glycerol-3-phosphate acyltransferase, putative, expressed -
3 Sobic.010G022000 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.008G066700 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.007G000700 choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
6 Sobic.010G228100 "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed -
7 Sobic.008G133200 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.006G219200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ATBAG1, putative, expressed -
9 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
10 Sobic.005G214600 - -
11 Sobic.010G037600 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.008G075200 2-dehydro-3-deoxyphosphooctonate aldolase, putative, expressed K01627: 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)
13 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
14 Sobic.001G518000 protein kinase, putative, expressed -
15 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
16 Sobic.001G534300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AT-GTL1, putative, expressed -
17 Sobic.006G065400 expressed protein -
18 Sobic.004G319000 OsSub22 - Putative Subtilisin homologue, expressed -
19 Sobic.010G110500 AMP-binding enzyme, putative, expressed -
20 Sobic.010G246700 glycosyl hydrolases family 16, putative, expressed K14504: xyloglucan:xyloglucosyl transferase TCH4


Gene co-expression network
sample Sobic002G314800 Sobic002G314800 Sobic010G078300 Sobic010G078300 Sobic002G314800--Sobic010G078300 Sobic001G099300 Sobic001G099300 Sobic002G314800--Sobic001G099300 Sobic010G022000 Sobic010G022000 Sobic002G314800--Sobic010G022000 Sobic008G066700 Sobic008G066700 Sobic002G314800--Sobic008G066700 Sobic007G000700 Sobic007G000700 Sobic002G314800--Sobic007G000700 Sobic010G228100 Sobic010G228100 Sobic002G314800--Sobic010G228100 Sobic008G133200 Sobic008G133200 Sobic002G314800--Sobic008G133200 Sobic006G219200 Sobic006G219200 Sobic002G314800--Sobic006G219200 Sobic009G151100 Sobic009G151100 Sobic002G314800--Sobic009G151100 Sobic010G078300--Sobic010G022000 Sobic010G078300--Sobic007G000700 Sobic010G078300--Sobic002G314800 Sobic001G518000 Sobic001G518000 Sobic010G078300--Sobic001G518000 Sobic010G211800 Sobic010G211800 Sobic010G078300--Sobic010G211800 Sobic010G092400 Sobic010G092400 Sobic010G078300--Sobic010G092400 Sobic009G216300 Sobic009G216300 Sobic010G078300--Sobic009G216300 Sobic003G401800 Sobic003G401800 Sobic010G078300--Sobic003G401800 Sobic005G062600 Sobic005G062600 Sobic010G078300--Sobic005G062600 Sobic001G099300--Sobic002G314800 Sobic010G110500 Sobic010G110500 Sobic001G099300--Sobic010G110500 Sobic010G037600 Sobic010G037600 Sobic001G099300--Sobic010G037600 Sobic005G214600 Sobic005G214600 Sobic001G099300--Sobic005G214600 Sobic010G246700 Sobic010G246700 Sobic001G099300--Sobic010G246700 Sobic001G099300--Sobic008G066700 Sobic009G035601 Sobic009G035601 Sobic001G099300--Sobic009G035601 Sobic006G249100 Sobic006G249100 Sobic001G099300--Sobic006G249100 Sobic001G519400 Sobic001G519400 Sobic001G099300--Sobic001G519400 Sobic010G022000--Sobic010G078300 Sobic006G065400 Sobic006G065400 Sobic010G022000--Sobic006G065400 Sobic003G238800 Sobic003G238800 Sobic010G022000--Sobic003G238800 Sobic001G138800 Sobic001G138800 Sobic010G022000--Sobic001G138800 Sobic010G022000--Sobic005G062600 Sobic010G022000--Sobic002G314800 Sobic002G343600 Sobic002G343600 Sobic010G022000--Sobic002G343600 Sobic007G137101 Sobic007G137101 Sobic010G022000--Sobic007G137101 Sobic006G232900 Sobic006G232900 Sobic010G022000--Sobic006G232900 Sobic002G033000 Sobic002G033000 Sobic008G066700--Sobic002G033000 Sobic004G263000 Sobic004G263000 Sobic008G066700--Sobic004G263000 Sobic008G066700--Sobic001G519400 Sobic008G066700--Sobic010G037600 Sobic008G123600 Sobic008G123600 Sobic008G066700--Sobic008G123600 Sobic002G329500 Sobic002G329500 Sobic008G066700--Sobic002G329500 Sobic001G357200 Sobic001G357200 Sobic008G066700--Sobic001G357200 Sobic004G060700 Sobic004G060700 Sobic008G066700--Sobic004G060700 Sobic008G066700--Sobic002G314800 Sobic007G000700--Sobic003G401800 Sobic006G081000 Sobic006G081000 Sobic007G000700--Sobic006G081000 Sobic003G226700 Sobic003G226700 Sobic007G000700--Sobic003G226700 Sobic002G320600 Sobic002G320600 Sobic007G000700--Sobic002G320600 Sobic007G000700--Sobic010G092400 Sobic007G000700--Sobic010G078300 Sobic003G078300 Sobic003G078300 Sobic007G000700--Sobic003G078300 Sobic007G000700--Sobic005G062600 Sobic003G289800 Sobic003G289800 Sobic007G000700--Sobic003G289800 Sobic001G334900 Sobic001G334900 Sobic010G228100--Sobic001G334900 Sobic003G006100 Sobic003G006100 Sobic010G228100--Sobic003G006100 Sobic001G037400 Sobic001G037400 Sobic010G228100--Sobic001G037400 Sobic009G232200 Sobic009G232200 Sobic010G228100--Sobic009G232200 Sobic004G243800 Sobic004G243800 Sobic010G228100--Sobic004G243800 Sobic009G033400 Sobic009G033400 Sobic010G228100--Sobic009G033400 Sobic004G168700 Sobic004G168700 Sobic010G228100--Sobic004G168700 Sobic003G031400 Sobic003G031400 Sobic010G228100--Sobic003G031400 Sobic010G096100 Sobic010G096100 Sobic010G228100--Sobic010G096100 Sobic008G133200--Sobic002G314800 Sobic008G133200--Sobic009G216300 Sobic008G133200--Sobic010G078300 Sobic010G165100 Sobic010G165100 Sobic008G133200--Sobic010G165100 Sobic004G047400 Sobic004G047400 Sobic008G133200--Sobic004G047400 Sobic009G185501 Sobic009G185501 Sobic008G133200--Sobic009G185501 Sobic008G133200--Sobic009G151100 Sobic009G128800 Sobic009G128800 Sobic008G133200--Sobic009G128800 Sobic004G118800 Sobic004G118800 Sobic008G133200--Sobic004G118800 Sobic001G389600 Sobic001G389600 Sobic006G219200--Sobic001G389600 Sobic006G274866 Sobic006G274866 Sobic006G219200--Sobic006G274866 Sobic006G219200--Sobic010G246700 Sobic002G142500 Sobic002G142500 Sobic006G219200--Sobic002G142500 Sobic009G055900 Sobic009G055900 Sobic006G219200--Sobic009G055900 Sobic006G219200--Sobic010G165100 Sobic002G045200 Sobic002G045200 Sobic006G219200--Sobic002G045200 Sobic002G403000 Sobic002G403000 Sobic006G219200--Sobic002G403000 Sobic002G377300 Sobic002G377300 Sobic006G219200--Sobic002G377300 Sobic003G365800 Sobic003G365800 Sobic009G151100--Sobic003G365800 Sobic010G156100 Sobic010G156100 Sobic009G151100--Sobic010G156100 Sobic003G283400 Sobic003G283400 Sobic009G151100--Sobic003G283400 Sobic003G308100 Sobic003G308100 Sobic009G151100--Sobic003G308100 Sobic009G151100--Sobic009G216300 Sobic002G428000 Sobic002G428000 Sobic009G151100--Sobic002G428000 Sobic004G000700 Sobic004G000700 Sobic009G151100--Sobic004G000700 Sobic009G151100--Sobic003G078300 Sobic008G075200 Sobic008G075200 Sobic009G151100--Sobic008G075200
Octagon: transcription factors


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