Gene annotation
Transcriptome id Sobic.002G275500.3
Synonym MYB85, AtMYB85, Sb02g030900
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt Q6URT8 , Q6URU5 , Q6URU6 , Q6URT0 , Q6URV4 , Q6URS0 , Q6URT5 , Q6URS9 , Q6URT1 , Q6URV3 , Q6URV0 , A0A1B6QDS6 , Q6URU2 , Q6URT7
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF674
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12350 : myb domain protein 42
RAP-DB (Rice) LOC_Os09g36250.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a017623 , Zm00025a009981 , Zm00025a031141 , Zm00025a005701 , Zm00025a026626 , Zm00025a034206 , Zm00025a046904 , Zm00025a046903 , Zm00025a034217 , Zm00025a032658 , Zm00025a047793 , Zm00025a042709 , Zm00025a017369 , Zm00025a043868 , Zm00025a039543 , Zm00025a007095 , Zm00025a025715 , Zm00025a036074
Brachypodium KQJ91191 , PNT74485 , PNT74484 , KQJ83102 , KQK14343 , KQK18687 , KQJ98346 , KQJ90159 , KQK01592
Barley HORVU0Hr1G006810.2 , HORVU0Hr1G006810.1 , HORVU5Hr1G103970.5 , HORVU5Hr1G103970.4 , HORVU5Hr1G103970.6 , HORVU5Hr1G103970.1 , HORVU5Hr1G103970.3 , HORVU5Hr1G103970.2 , HORVU7Hr1G027370.1 , HORVU7Hr1G027370.2 , HORVU6Hr1G073500.5 , HORVU6Hr1G073500.4 , HORVU6Hr1G073500.3 , HORVU6Hr1G073500.1 , HORVU7Hr1G041810.9 , HORVU7Hr1G041810.8 , HORVU7Hr1G041810.1 , HORVU7Hr1G041810.3 , HORVU7Hr1G041810.2 , HORVU7Hr1G041810.5 , HORVU7Hr1G041810.4 , HORVU7Hr1G041810.7 , HORVU7Hr1G041810.6 , HORVU7Hr1G057410.9 , HORVU7Hr1G057410.2 , HORVU7Hr1G057410.3 , HORVU7Hr1G057410.1 , HORVU7Hr1G057410.6 , HORVU7Hr1G057410.7 , HORVU7Hr1G057410.4 , HORVU7Hr1G057410.5 , HORVU1Hr1G074260.1 , HORVU1Hr1G074260.2 , HORVU1Hr1G074260.3 , HORVU1Hr1G074260.4 , HORVU1Hr1G074260.5 , HORVU1Hr1G074260.6 , HORVU1Hr1G074260.7 , HORVU5Hr1G081770.2 , HORVU5Hr1G081770.3 , HORVU5Hr1G081770.1 , HORVU5Hr1G081770.6 , HORVU5Hr1G081770.7 , HORVU5Hr1G081770.4 , HORVU5Hr1G081770.5 , HORVU5Hr1G081770.8 , HORVU5Hr1G060650.10 , HORVU5Hr1G060650.1 , HORVU5Hr1G060650.2 , HORVU5Hr1G060650.3 , HORVU5Hr1G060650.5 , HORVU5Hr1G060650.6 , HORVU5Hr1G060650.7 , HORVU5Hr1G060650.9
Wheat TraesCS6D02G274900 , TraesCS3A02G257800 , TraesCS5B02G203100 , TraesCS7A02G205100 , TraesCS3B02G290600 , TraesCS5D02G326600 , TraesCS2A02G447500 , TraesCS7B02G112400 , TraesCS7B02G112400 , TraesCS5B02G320800 , TraesCS5A02G205200 , TraesCS7A02G030700 , TraesCS3A02G384400 , TraesCS1B02G279400 , TraesCS5D02G210900 , TraesCS3D02G377300 , TraesCS3D02G257800 , TraesCS3B02G416400 , TraesCS7D02G208000 , TraesCS6B02G324600 , TraesCS6B02G324600
Populus -


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cDNA sequences
Sobic.002G275500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G402400 expressed protein -
2 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
3 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
4 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
5 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -
6 Sobic.004G271500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
7 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
9 Sobic.007G119500 expressed protein -
10 Sobic.008G014700 domain of unknown function, DUF250 domain containing protein, expressed -
11 Sobic.001G029800 expressed protein -
12 Sobic.010G067900 ORC1 - Putative origin recognition complex subunit 1, expressed K02603: origin recognition complex subunit 1
13 Sobic.001G183600 galactosyltransferase, putative, expressed -
14 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
15 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
16 Sobic.007G091900 ATP binding protein, putative, expressed -
17 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
18 Sobic.002G214200 ferric reductase, putative, expressed K13447: respiratory burst oxidase
19 Sobic.001G272600 powdery mildew resistance protein PM3b, putative, expressed -
20 Sobic.004G099600 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA


Gene co-expression network
sample Sobic002G275500 Sobic002G275500 Sobic001G402400 Sobic001G402400 Sobic002G275500--Sobic001G402400 Sobic003G052100 Sobic003G052100 Sobic002G275500--Sobic003G052100 Sobic009G206500 Sobic009G206500 Sobic002G275500--Sobic009G206500 Sobic001G144200 Sobic001G144200 Sobic002G275500--Sobic001G144200 Sobic003G296500 Sobic003G296500 Sobic002G275500--Sobic003G296500 Sobic004G271500 Sobic004G271500 Sobic002G275500--Sobic004G271500 Sobic003G270400 Sobic003G270400 Sobic002G275500--Sobic003G270400 Sobic010G042600 Sobic010G042600 Sobic002G275500--Sobic010G042600 Sobic007G119500 Sobic007G119500 Sobic002G275500--Sobic007G119500 Sobic001G402400--Sobic003G270400 Sobic001G402400--Sobic003G052100 Sobic001G402400--Sobic002G275500 Sobic001G402400--Sobic003G296500 Sobic010G220300 Sobic010G220300 Sobic001G402400--Sobic010G220300 Sobic008G014700 Sobic008G014700 Sobic001G402400--Sobic008G014700 Sobic005G057000 Sobic005G057000 Sobic001G402400--Sobic005G057000 Sobic002G376100 Sobic002G376100 Sobic001G402400--Sobic002G376100 Sobic006G009500 Sobic006G009500 Sobic001G402400--Sobic006G009500 Sobic003G052100--Sobic001G402400 Sobic007G041600 Sobic007G041600 Sobic003G052100--Sobic007G041600 Sobic003G052100--Sobic002G275500 Sobic003G052100--Sobic010G220300 Sobic003G052100--Sobic006G009500 Sobic009G079900 Sobic009G079900 Sobic003G052100--Sobic009G079900 Sobic003G052100--Sobic003G296500 Sobic005G231300 Sobic005G231300 Sobic003G052100--Sobic005G231300 Sobic003G052100--Sobic004G271500 Sobic007G139500 Sobic007G139500 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic006G267500 Sobic006G267500 Sobic009G206500--Sobic006G267500 Sobic001G437500 Sobic001G437500 Sobic009G206500--Sobic001G437500 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic001G144200--Sobic009G206500 Sobic001G144200--Sobic010G042600 Sobic001G144200--Sobic010G067800 Sobic005G025900 Sobic005G025900 Sobic001G144200--Sobic005G025900 Sobic001G144200--Sobic002G275500 Sobic002G191000 Sobic002G191000 Sobic001G144200--Sobic002G191000 Sobic001G144200--Sobic004G271500 Sobic001G144200--Sobic007G040301 Sobic003G118100 Sobic003G118100 Sobic001G144200--Sobic003G118100 Sobic003G296500--Sobic001G402400 Sobic007G208100 Sobic007G208100 Sobic003G296500--Sobic007G208100 Sobic010G104400 Sobic010G104400 Sobic003G296500--Sobic010G104400 Sobic003G296500--Sobic005G231300 Sobic003G296500--Sobic003G052100 Sobic001G301900 Sobic001G301900 Sobic003G296500--Sobic001G301900 Sobic003G296500--Sobic010G220300 Sobic001G029800 Sobic001G029800 Sobic003G296500--Sobic001G029800 Sobic003G296500--Sobic004G271500 Sobic001G403200 Sobic001G403200 Sobic004G271500--Sobic001G403200 Sobic004G271500--Sobic002G191000 Sobic010G176800 Sobic010G176800 Sobic004G271500--Sobic010G176800 Sobic004G271500--Sobic001G029800 Sobic004G271500--Sobic009G079900 Sobic002G158900 Sobic002G158900 Sobic004G271500--Sobic002G158900 Sobic001G314000 Sobic001G314000 Sobic004G271500--Sobic001G314000 Sobic002G020500 Sobic002G020500 Sobic004G271500--Sobic002G020500 Sobic004G271500--Sobic001G144200 Sobic003G270400--Sobic001G402400 Sobic003G270400--Sobic007G119500 Sobic003G366300 Sobic003G366300 Sobic003G270400--Sobic003G366300 Sobic007G091900 Sobic007G091900 Sobic003G270400--Sobic007G091900 Sobic005G112000 Sobic005G112000 Sobic003G270400--Sobic005G112000 Sobic001G406700 Sobic001G406700 Sobic003G270400--Sobic001G406700 Sobic004G047600 Sobic004G047600 Sobic003G270400--Sobic004G047600 Sobic003G270400--Sobic008G014700 Sobic003G378800 Sobic003G378800 Sobic003G270400--Sobic003G378800 Sobic010G042600--Sobic003G118100 Sobic010G042600--Sobic009G206500 Sobic010G042600--Sobic001G144200 Sobic010G042600--Sobic006G267500 Sobic003G266400 Sobic003G266400 Sobic010G042600--Sobic003G266400 Sobic010G018500 Sobic010G018500 Sobic010G042600--Sobic010G018500 Sobic001G196000 Sobic001G196000 Sobic010G042600--Sobic001G196000 Sobic006G035600 Sobic006G035600 Sobic010G042600--Sobic006G035600 Sobic001G500400 Sobic001G500400 Sobic010G042600--Sobic001G500400 Sobic009G170500 Sobic009G170500 Sobic007G119500--Sobic009G170500 Sobic007G119500--Sobic003G270400 Sobic007G119500--Sobic004G047600 Sobic001G072600 Sobic001G072600 Sobic007G119500--Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic007G119500--Sobic002G167600 Sobic007G119500--Sobic003G378800 Sobic001G360700 Sobic001G360700 Sobic007G119500--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic007G119500--Sobic006G144600 Sobic007G119500--Sobic001G406700
Octagon: transcription factors


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